RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 NISCHQ9Y2I1 1504 aa49.98■■■■■ 5.59
CACFD1-205ENST00000489519 CCDC180Q9P1Z9 1646 aa44.76■■■■■ 4.76
CACFD1-205ENST00000489519 ABCC9O60706 1549 aa44.55■■■■■ 4.72
CACFD1-205ENST00000489519 RB1CC1Q8TDY2 1594 aa42.54■■■■■ 4.4
CACFD1-205ENST00000489519 NACADO15069 1562 aa42.31■■■■■ 4.36
CACFD1-205ENST00000489519 DCAF8L2P0C7V8 631 aa42.16■■■■■ 4.34
CACFD1-205ENST00000489519 MYO15BQ96JP2 1530 aa41.81■■■■■ 4.28
CACFD1-205ENST00000489519 DNAJC5BQ9UF47 199 aa41.65■■■■■ 4.26
CACFD1-205ENST00000489519 PABPN1Q86U42 306 aaKnown RBP eCLIP41.54■■■■■ 4.24
CACFD1-205ENST00000489519 UNC13AQ9UPW8 1703 aa41.5■■■■■ 4.23
CACFD1-205ENST00000489519 ZCCHC6Q5VYS8 1495 aaKnown RBP41.43■■■■■ 4.22
CACFD1-205ENST00000489519 DCAF1Q9Y4B6 1507 aa41.33■■■■■ 4.21
CACFD1-205ENST00000489519 BICRAQ9NZM4 1560 aa41.24■■■■■ 4.19
CACFD1-205ENST00000489519 SHROOM4Q9ULL8 1493 aa40.79■■■■■ 4.12
CACFD1-205ENST00000489519 SCRIBQ14160 1630 aa40.75■■■■■ 4.11
CACFD1-205ENST00000489519 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
CACFD1-205ENST00000489519 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
CACFD1-205ENST00000489519 CECR2Q9BXF3 1484 aa40.15■■■■■ 4.02
CACFD1-205ENST00000489519 NCAPD3P42695 1498 aa39.07■■■■□ 3.85
CACFD1-205ENST00000489519 ATAD2BQ9ULI0 1458 aa38.94■■■■□ 3.82
CACFD1-205ENST00000489519 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
CACFD1-205ENST00000489519 SMARCA2P51531 1590 aa38.87■■■■□ 3.81
CACFD1-205ENST00000489519 BAZ1AQ9NRL2 1556 aaPredicted RBP38.79■■■■□ 3.8
CACFD1-205ENST00000489519 HMGXB3Q12766 1538 aa38.76■■■■□ 3.8
CACFD1-205ENST00000489519 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
CACFD1-205ENST00000489519 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.76
CACFD1-205ENST00000489519 ERCC6Q03468 1493 aa38.5■■■■□ 3.75
CACFD1-205ENST00000489519 MROH2BQ7Z745 1585 aa38.48■■■■□ 3.75
CACFD1-205ENST00000489519 CUX2O14529 1486 aa38.38■■■■□ 3.73
CACFD1-205ENST00000489519 NESP48681 1621 aa38.31■■■■□ 3.72
CACFD1-205ENST00000489519 DNAJC5Q9H3Z4 198 aa38.19■■■■□ 3.7
CACFD1-205ENST00000489519 LAMC3Q9Y6N6 1575 aa38.14■■■■□ 3.7
CACFD1-205ENST00000489519 WIZO95785 1651 aa38.01■■■■□ 3.67
CACFD1-205ENST00000489519 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
CACFD1-205ENST00000489519 CADPSQ9ULU8 1353 aa37.9■■■■□ 3.66
CACFD1-205ENST00000489519 THOC2Q8NI27 1593 aaKnown RBP37.87■■■■□ 3.65
CACFD1-205ENST00000489519 KIF21AQ7Z4S6 1674 aa37.82■■■■□ 3.64
CACFD1-205ENST00000489519 RSF1Q96T23 1441 aaPredicted RBP37.78■■■■□ 3.64
CACFD1-205ENST00000489519 TOP2AP11388 1531 aaKnown RBP37.57■■■■□ 3.61
CACFD1-205ENST00000489519 MRC2Q9UBG0 1479 aa37.56■■■■□ 3.6
CACFD1-205ENST00000489519 CFTRP13569 1480 aa37.48■■■■□ 3.59
CACFD1-205ENST00000489519 CEP164Q9UPV0 1460 aa37.45■■■■□ 3.59
CACFD1-205ENST00000489519 WDR62O43379 1518 aa37.45■■■■□ 3.59
CACFD1-205ENST00000489519 FANCD2Q9BXW9 1451 aa37.43■■■■□ 3.58
CACFD1-205ENST00000489519 CCDC88BA6NC98 1476 aa37.16■■■■□ 3.54
CACFD1-205ENST00000489519 URB2Q14146 1524 aaKnown RBP37.08■■■■□ 3.53
CACFD1-205ENST00000489519 PRDM2Q13029 1718 aa37.07■■■■□ 3.53
CACFD1-205ENST00000489519 ABCC8Q09428 1581 aa36.75■■■■□ 3.47
CACFD1-205ENST00000489519 OSCARQ8IYS5 282 aa36.73■■■■□ 3.47
CACFD1-205ENST00000489519 TOPBP1Q92547 1522 aa36.73■■■■□ 3.47
CACFD1-205ENST00000489519 IFT140Q96RY7 1462 aa36.71■■■■□ 3.47
CACFD1-205ENST00000489519 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
CACFD1-205ENST00000489519 ZNF608Q9ULD9 1512 aaPredicted RBP36.58■■■■□ 3.45
CACFD1-205ENST00000489519 TRIM41Q8WV44 630 aa36.54■■■■□ 3.44
CACFD1-205ENST00000489519 EIF4G3O43432 1585 aaKnown RBP36.38■■■■□ 3.41
CACFD1-205ENST00000489519 TARBP1Q13395 1621 aaKnown RBP36.37■■■■□ 3.41
CACFD1-205ENST00000489519 POLA1P09884 1462 aaPredicted RBP36.36■■■■□ 3.41
CACFD1-205ENST00000489519 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.4
CACFD1-205ENST00000489519 SUPT5HO00267 1087 aaKnown RBP36.27■■■■□ 3.4
CACFD1-205ENST00000489519 SOGA1O94964 1423 aa36.25■■■■□ 3.39
CACFD1-205ENST00000489519 RAD54L2Q9Y4B4 1467 aa36.21■■■■□ 3.39
CACFD1-205ENST00000489519 FGD5Q6ZNL6 1462 aa36.16■■■■□ 3.38
CACFD1-205ENST00000489519 CUX1P39880 1505 aa36.14■■■■□ 3.38
CACFD1-205ENST00000489519 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.37
CACFD1-205ENST00000489519 RIMBP3CA6NJZ7 1639 aa36.11■■■■□ 3.37
CACFD1-205ENST00000489519 RIMBP3BA6NNM3 1639 aa36.11■■■■□ 3.37
CACFD1-205ENST00000489519 RIMBP3Q9UFD9 1639 aa36.11■■■■□ 3.37
CACFD1-205ENST00000489519 FBLN2P98095 1184 aa36.08■■■■□ 3.37
CACFD1-205ENST00000489519 CHD1O14646 1710 aa36.07■■■■□ 3.36
CACFD1-205ENST00000489519 WDR97A6NE52 1622 aa36.07■■■■□ 3.36
CACFD1-205ENST00000489519 ARHGEF11O15085 1522 aa36.03■■■■□ 3.36
CACFD1-205ENST00000489519 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
CACFD1-205ENST00000489519 GRIN2BQ13224 1484 aa35.9■■■■□ 3.34
CACFD1-205ENST00000489519 MAGI1Q96QZ7 1491 aaPredicted RBP35.89■■■■□ 3.34
CACFD1-205ENST00000489519 CHMP7Q8WUX9 453 aaPredicted RBP35.87■■■■□ 3.33
CACFD1-205ENST00000489519 CYB5RLQ6IPT4 315 aa35.82■■■■□ 3.32
CACFD1-205ENST00000489519 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
CACFD1-205ENST00000489519 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
CACFD1-205ENST00000489519 SYNJ2O15056 1496 aa35.75■■■■□ 3.31
CACFD1-205ENST00000489519 WRNQ14191 1432 aaPredicted RBP eCLIP35.72■■■■□ 3.31
CACFD1-205ENST00000489519 SYNJ1O43426 1573 aa35.72■■■■□ 3.31
CACFD1-205ENST00000489519 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
CACFD1-205ENST00000489519 CLASP1Q7Z460 1538 aa35.68■■■■□ 3.3
CACFD1-205ENST00000489519 ARAP1Q96P48 1450 aa35.67■■■■□ 3.3
CACFD1-205ENST00000489519 ABCA5Q8WWZ7 1642 aa35.67■■■■□ 3.3
CACFD1-205ENST00000489519 TOP2BQ02880 1626 aa35.64■■■■□ 3.3
CACFD1-205ENST00000489519 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
CACFD1-205ENST00000489519 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
CACFD1-205ENST00000489519 ADAMTS12P58397 1594 aa35.38■■■■□ 3.25
CACFD1-205ENST00000489519 TRHP20396 242 aaPredicted RBP35.37■■■■□ 3.25
CACFD1-205ENST00000489519 FHAD1B1AJZ9 1412 aa35.36■■■■□ 3.25
CACFD1-205ENST00000489519 ERICH3Q5RHP9 1530 aa35.35■■■■□ 3.25
CACFD1-205ENST00000489519 NUP160Q12769 1436 aa35.3■■■■□ 3.24
CACFD1-205ENST00000489519 CEP170Q5SW79 1584 aa35.24■■■■□ 3.23
CACFD1-205ENST00000489519 ERCC6L2Q5T890 1561 aa35.1■■■■□ 3.21
CACFD1-205ENST00000489519 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
CACFD1-205ENST00000489519 KIF27Q86VH2 1401 aa35■■■■□ 3.19
CACFD1-205ENST00000489519 JPH4Q96JJ6 628 aa35■■■■□ 3.19
CACFD1-205ENST00000489519 IGF1RP08069 1367 aa34.96■■■■□ 3.19
CACFD1-205ENST00000489519 PRG4Q92954 1404 aaPredicted RBP34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms