RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
GBP3-207ENST00000489444 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
GBP3-207ENST00000489444 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
GBP3-207ENST00000489444 ABCC9O60706 1549 aa10.29□□□□□ -0.76
GBP3-207ENST00000489444 AEBP2Q6ZN18 517 aaPredicted RBP10.22□□□□□ -0.77
GBP3-207ENST00000489444 RB1CC1Q8TDY2 1594 aa9.94□□□□□ -0.82
GBP3-207ENST00000489444 NACADO15069 1562 aa9.92□□□□□ -0.82
GBP3-207ENST00000489444 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
GBP3-207ENST00000489444 ZCCHC6Q5VYS8 1495 aaKnown RBP9.83□□□□□ -0.84
GBP3-207ENST00000489444 DCAF1Q9Y4B6 1507 aa9.8□□□□□ -0.84
GBP3-207ENST00000489444 DCAF8L2P0C7V8 631 aa9.78□□□□□ -0.84
GBP3-207ENST00000489444 UNC13AQ9UPW8 1703 aa9.67□□□□□ -0.86
GBP3-207ENST00000489444 BICRAQ9NZM4 1560 aa9.61□□□□□ -0.87
GBP3-207ENST00000489444 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
GBP3-207ENST00000489444 PABPN1Q86U42 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
GBP3-207ENST00000489444 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
GBP3-207ENST00000489444 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
GBP3-207ENST00000489444 PHF23Q9BUL5 403 aaPredicted RBP9.37□□□□□ -0.91
GBP3-207ENST00000489444 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
GBP3-207ENST00000489444 CC2D2AQ9P2K1 1620 aa9.33□□□□□ -0.92
GBP3-207ENST00000489444 CECR2Q9BXF3 1484 aa9.27□□□□□ -0.93
GBP3-207ENST00000489444 SMARCA4P51532 1647 aa9.17□□□□□ -0.94
GBP3-207ENST00000489444 BAZ1AQ9NRL2 1556 aaPredicted RBP9.16□□□□□ -0.94
GBP3-207ENST00000489444 SMARCA2P51531 1590 aa9.14□□□□□ -0.95
GBP3-207ENST00000489444 NCAPD3P42695 1498 aa9.13□□□□□ -0.95
GBP3-207ENST00000489444 ATAD2BQ9ULI0 1458 aa9.12□□□□□ -0.95
GBP3-207ENST00000489444 HMGXB3Q12766 1538 aa9.11□□□□□ -0.95
GBP3-207ENST00000489444 PEG3Q9GZU2 1588 aa9.1□□□□□ -0.95
GBP3-207ENST00000489444 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
GBP3-207ENST00000489444 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
GBP3-207ENST00000489444 WIZO95785 1651 aa8.97□□□□□ -0.97
GBP3-207ENST00000489444 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
GBP3-207ENST00000489444 SENP3Q9H4L4 574 aaPredicted RBP8.94□□□□□ -0.98
GBP3-207ENST00000489444 LAMC3Q9Y6N6 1575 aa8.92□□□□□ -0.98
GBP3-207ENST00000489444 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
GBP3-207ENST00000489444 ERCC6Q03468 1493 aa8.9□□□□□ -0.99
GBP3-207ENST00000489444 NESP48681 1621 aa8.88□□□□□ -0.99
GBP3-207ENST00000489444 CUX2O14529 1486 aa8.86□□□□□ -0.99
GBP3-207ENST00000489444 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
GBP3-207ENST00000489444 PDS5BQ9NTI5 1447 aa8.84□□□□□ -0.99
GBP3-207ENST00000489444 THOC2Q8NI27 1593 aaKnown RBP8.81□□□□□ -1
GBP3-207ENST00000489444 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
GBP3-207ENST00000489444 CFTRP13569 1480 aa8.8□□□□□ -1
GBP3-207ENST00000489444 CCDC88BA6NC98 1476 aa8.77□□□□□ -1.01
GBP3-207ENST00000489444 MRC2Q9UBG0 1479 aa8.76□□□□□ -1.01
GBP3-207ENST00000489444 PRDM2Q13029 1718 aa8.76□□□□□ -1.01
GBP3-207ENST00000489444 CEP164Q9UPV0 1460 aa8.75□□□□□ -1.01
GBP3-207ENST00000489444 FANCD2Q9BXW9 1451 aa8.75□□□□□ -1.01
GBP3-207ENST00000489444 PLPPR3Q6T4P5 718 aa8.75□□□□□ -1.01
GBP3-207ENST00000489444 WDR62O43379 1518 aa8.74□□□□□ -1.01
GBP3-207ENST00000489444 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
GBP3-207ENST00000489444 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
GBP3-207ENST00000489444 ABCC8Q09428 1581 aa8.64□□□□□ -1.03
GBP3-207ENST00000489444 SUPT5HO00267 1087 aaKnown RBP8.63□□□□□ -1.03
GBP3-207ENST00000489444 DNMBPQ6XZF7 1577 aa8.62□□□□□ -1.03
GBP3-207ENST00000489444 TOPBP1Q92547 1522 aa8.61□□□□□ -1.03
GBP3-207ENST00000489444 IFT140Q96RY7 1462 aa8.59□□□□□ -1.04
GBP3-207ENST00000489444 DNAJC5Q9H3Z4 198 aa8.57□□□□□ -1.04
GBP3-207ENST00000489444 TARBP1Q13395 1621 aaKnown RBP8.52□□□□□ -1.04
GBP3-207ENST00000489444 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
GBP3-207ENST00000489444 CUX1P39880 1505 aa8.52□□□□□ -1.05
GBP3-207ENST00000489444 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
GBP3-207ENST00000489444 POTEDQ86YR6 584 aa8.51□□□□□ -1.05
GBP3-207ENST00000489444 EIF4G3O43432 1585 aaKnown RBP8.5□□□□□ -1.05
GBP3-207ENST00000489444 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
GBP3-207ENST00000489444 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
GBP3-207ENST00000489444 SOGA1O94964 1423 aa8.49□□□□□ -1.05
GBP3-207ENST00000489444 RAD54L2Q9Y4B4 1467 aa8.47□□□□□ -1.05
GBP3-207ENST00000489444 BIVM-ERCC5R4GMW8 1640 aa8.47□□□□□ -1.05
GBP3-207ENST00000489444 TOP2BQ02880 1626 aa8.46□□□□□ -1.06
GBP3-207ENST00000489444 WRNQ14191 1432 aaPredicted RBP eCLIP8.45□□□□□ -1.06
GBP3-207ENST00000489444 AQRO60306 1485 aaKnown RBP eCLIP8.44□□□□□ -1.06
GBP3-207ENST00000489444 ABCA10Q8WWZ4 1543 aa8.43□□□□□ -1.06
GBP3-207ENST00000489444 SYNJ1O43426 1573 aa8.43□□□□□ -1.06
GBP3-207ENST00000489444 KCNA4P22459 653 aa8.43□□□□□ -1.06
GBP3-207ENST00000489444 OSCARQ8IYS5 282 aa8.42□□□□□ -1.06
GBP3-207ENST00000489444 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
GBP3-207ENST00000489444 TDRD9Q8NDG6 1382 aaKnown RBP8.41□□□□□ -1.06
GBP3-207ENST00000489444 ABCA5Q8WWZ7 1642 aa8.41□□□□□ -1.06
GBP3-207ENST00000489444 MAGI1Q96QZ7 1491 aaPredicted RBP8.41□□□□□ -1.06
GBP3-207ENST00000489444 PBRM1Q86U86 1689 aa8.4□□□□□ -1.06
GBP3-207ENST00000489444 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
GBP3-207ENST00000489444 SNAPC4Q5SXM2 1469 aa8.39□□□□□ -1.07
GBP3-207ENST00000489444 CHD1O14646 1710 aa8.39□□□□□ -1.07
GBP3-207ENST00000489444 SYNJ2O15056 1496 aa8.37□□□□□ -1.07
GBP3-207ENST00000489444 ERICH3Q5RHP9 1530 aa8.34□□□□□ -1.07
GBP3-207ENST00000489444 ADAMTS12P58397 1594 aa8.34□□□□□ -1.07
GBP3-207ENST00000489444 FBLN2P98095 1184 aa8.33□□□□□ -1.08
GBP3-207ENST00000489444 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
GBP3-207ENST00000489444 CLASP1Q7Z460 1538 aa8.33□□□□□ -1.08
GBP3-207ENST00000489444 ADRA2BP18089 450 aa8.32□□□□□ -1.08
GBP3-207ENST00000489444 RIMBP3CA6NJZ7 1639 aa8.32□□□□□ -1.08
GBP3-207ENST00000489444 RIMBP3BA6NNM3 1639 aa8.32□□□□□ -1.08
GBP3-207ENST00000489444 RIMBP3Q9UFD9 1639 aa8.32□□□□□ -1.08
GBP3-207ENST00000489444 FHAD1B1AJZ9 1412 aa8.31□□□□□ -1.08
GBP3-207ENST00000489444 ARHGEF11O15085 1522 aa8.3□□□□□ -1.08
GBP3-207ENST00000489444 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
GBP3-207ENST00000489444 KIF27Q86VH2 1401 aa8.29□□□□□ -1.08
GBP3-207ENST00000489444 CUL7Q14999 1698 aa8.27□□□□□ -1.09
GBP3-207ENST00000489444 NUP160Q12769 1436 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms