RNA–Protein interactions for RNA: ENST00000489387.1

AP4M1-216, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 2

Gene AP4M1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-216ENST00000489387 NISCHQ9Y2I1 1504 aa35.96■■■■□ 3.35
AP4M1-216ENST00000489387 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
AP4M1-216ENST00000489387 ABCC9O60706 1549 aa31.99■■■□□ 2.71
AP4M1-216ENST00000489387 RB1CC1Q8TDY2 1594 aa30.52■■■□□ 2.48
AP4M1-216ENST00000489387 NACADO15069 1562 aa30.37■■■□□ 2.45
AP4M1-216ENST00000489387 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
AP4M1-216ENST00000489387 MYO15BQ96JP2 1530 aa30.03■■■□□ 2.4
AP4M1-216ENST00000489387 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
AP4M1-216ENST00000489387 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
AP4M1-216ENST00000489387 ZCCHC6Q5VYS8 1495 aaKnown RBP29.86■■■□□ 2.37
AP4M1-216ENST00000489387 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
AP4M1-216ENST00000489387 DCAF1Q9Y4B6 1507 aa29.72■■■□□ 2.35
AP4M1-216ENST00000489387 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
AP4M1-216ENST00000489387 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
AP4M1-216ENST00000489387 SHROOM4Q9ULL8 1493 aa29.25■■■□□ 2.27
AP4M1-216ENST00000489387 CC2D2AQ9P2K1 1620 aa28.93■■■□□ 2.22
AP4M1-216ENST00000489387 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
AP4M1-216ENST00000489387 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
AP4M1-216ENST00000489387 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
AP4M1-216ENST00000489387 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
AP4M1-216ENST00000489387 ATAD2BQ9ULI0 1458 aa28■■■□□ 2.07
AP4M1-216ENST00000489387 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
AP4M1-216ENST00000489387 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
AP4M1-216ENST00000489387 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
AP4M1-216ENST00000489387 PEG3Q9GZU2 1588 aa27.76■■■□□ 2.03
AP4M1-216ENST00000489387 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
AP4M1-216ENST00000489387 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
AP4M1-216ENST00000489387 NESP48681 1621 aa27.56■■■□□ 2
AP4M1-216ENST00000489387 ERCC6Q03468 1493 aa27.56■■■□□ 2
AP4M1-216ENST00000489387 CUX2O14529 1486 aa27.48■■□□□ 1.99
AP4M1-216ENST00000489387 WIZO95785 1651 aa27.4■■□□□ 1.98
AP4M1-216ENST00000489387 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
AP4M1-216ENST00000489387 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
AP4M1-216ENST00000489387 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
AP4M1-216ENST00000489387 KIF21AQ7Z4S6 1674 aa27.21■■□□□ 1.95
AP4M1-216ENST00000489387 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
AP4M1-216ENST00000489387 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
AP4M1-216ENST00000489387 PDS5BQ9NTI5 1447 aa27.17■■□□□ 1.94
AP4M1-216ENST00000489387 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
AP4M1-216ENST00000489387 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
AP4M1-216ENST00000489387 CFTRP13569 1480 aa26.93■■□□□ 1.9
AP4M1-216ENST00000489387 WDR62O43379 1518 aa26.91■■□□□ 1.9
AP4M1-216ENST00000489387 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
AP4M1-216ENST00000489387 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
AP4M1-216ENST00000489387 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
AP4M1-216ENST00000489387 PRDM2Q13029 1718 aa26.7■■□□□ 1.86
AP4M1-216ENST00000489387 URB2Q14146 1524 aaKnown RBP26.68■■□□□ 1.86
AP4M1-216ENST00000489387 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
AP4M1-216ENST00000489387 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
AP4M1-216ENST00000489387 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
AP4M1-216ENST00000489387 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
AP4M1-216ENST00000489387 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
AP4M1-216ENST00000489387 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
AP4M1-216ENST00000489387 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
AP4M1-216ENST00000489387 EIF4G3O43432 1585 aaKnown RBP26.17■■□□□ 1.78
AP4M1-216ENST00000489387 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
AP4M1-216ENST00000489387 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
AP4M1-216ENST00000489387 AQRO60306 1485 aaKnown RBP eCLIP26.08■■□□□ 1.77
AP4M1-216ENST00000489387 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
AP4M1-216ENST00000489387 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
AP4M1-216ENST00000489387 CUX1P39880 1505 aa26.04■■□□□ 1.76
AP4M1-216ENST00000489387 FGD5Q6ZNL6 1462 aa26.01■■□□□ 1.75
AP4M1-216ENST00000489387 SOGA1O94964 1423 aa26■■□□□ 1.75
AP4M1-216ENST00000489387 CHD1O14646 1710 aa25.95■■□□□ 1.74
AP4M1-216ENST00000489387 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
AP4M1-216ENST00000489387 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
AP4M1-216ENST00000489387 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
AP4M1-216ENST00000489387 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
AP4M1-216ENST00000489387 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
AP4M1-216ENST00000489387 ARHGEF11O15085 1522 aa25.86■■□□□ 1.73
AP4M1-216ENST00000489387 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
AP4M1-216ENST00000489387 FBLN2P98095 1184 aa25.79■■□□□ 1.72
AP4M1-216ENST00000489387 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
AP4M1-216ENST00000489387 MAGI1Q96QZ7 1491 aaPredicted RBP25.74■■□□□ 1.71
AP4M1-216ENST00000489387 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
AP4M1-216ENST00000489387 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
AP4M1-216ENST00000489387 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
AP4M1-216ENST00000489387 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
AP4M1-216ENST00000489387 BIVM-ERCC5R4GMW8 1640 aa25.67■■□□□ 1.7
AP4M1-216ENST00000489387 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
AP4M1-216ENST00000489387 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
AP4M1-216ENST00000489387 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
AP4M1-216ENST00000489387 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
AP4M1-216ENST00000489387 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
AP4M1-216ENST00000489387 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
AP4M1-216ENST00000489387 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
AP4M1-216ENST00000489387 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
AP4M1-216ENST00000489387 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
AP4M1-216ENST00000489387 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
AP4M1-216ENST00000489387 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
AP4M1-216ENST00000489387 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
AP4M1-216ENST00000489387 NUP160Q12769 1436 aa25.37■■□□□ 1.65
AP4M1-216ENST00000489387 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
AP4M1-216ENST00000489387 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
AP4M1-216ENST00000489387 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
AP4M1-216ENST00000489387 TRHP20396 242 aaPredicted RBP25.21■■□□□ 1.63
AP4M1-216ENST00000489387 IGF1RP08069 1367 aa25.12■■□□□ 1.61
AP4M1-216ENST00000489387 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
AP4M1-216ENST00000489387 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
AP4M1-216ENST00000489387 PRG4Q92954 1404 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 253.9 ms