RNA–Protein interactions for RNA: ENST00000489356.1

FGD2-208, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 2

Gene FGD2, Length 1,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-208ENST00000489356 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.53
FGD2-208ENST00000489356 CCDC180Q9P1Z9 1646 aa38.6■■■■□ 3.77
FGD2-208ENST00000489356 ABCC9O60706 1549 aa38.45■■■■□ 3.75
FGD2-208ENST00000489356 DCAF8L2P0C7V8 631 aa36.71■■■■□ 3.47
FGD2-208ENST00000489356 RB1CC1Q8TDY2 1594 aa36.66■■■■□ 3.46
FGD2-208ENST00000489356 NACADO15069 1562 aa36.48■■■■□ 3.43
FGD2-208ENST00000489356 MYO15BQ96JP2 1530 aa36.02■■■■□ 3.36
FGD2-208ENST00000489356 PABPN1Q86U42 306 aaKnown RBP eCLIP35.95■■■■□ 3.35
FGD2-208ENST00000489356 ZCCHC6Q5VYS8 1495 aaKnown RBP35.95■■■■□ 3.35
FGD2-208ENST00000489356 DNAJC5BQ9UF47 199 aa35.75■■■■□ 3.31
FGD2-208ENST00000489356 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
FGD2-208ENST00000489356 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
FGD2-208ENST00000489356 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
FGD2-208ENST00000489356 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
FGD2-208ENST00000489356 SHROOM4Q9ULL8 1493 aa35.04■■■■□ 3.2
FGD2-208ENST00000489356 CC2D2AQ9P2K1 1620 aa34.67■■■■□ 3.14
FGD2-208ENST00000489356 EIF4G1Q04637 1599 aaKnown RBP34.67■■■■□ 3.14
FGD2-208ENST00000489356 CECR2Q9BXF3 1484 aa34.56■■■■□ 3.12
FGD2-208ENST00000489356 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
FGD2-208ENST00000489356 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
FGD2-208ENST00000489356 ATAD2BQ9ULI0 1458 aa33.67■■■□□ 2.98
FGD2-208ENST00000489356 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
FGD2-208ENST00000489356 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
FGD2-208ENST00000489356 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
FGD2-208ENST00000489356 MROH2BQ7Z745 1585 aa33.41■■■□□ 2.94
FGD2-208ENST00000489356 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
FGD2-208ENST00000489356 PEG3Q9GZU2 1588 aa33.29■■■□□ 2.92
FGD2-208ENST00000489356 ERCC6Q03468 1493 aa33.2■■■□□ 2.9
FGD2-208ENST00000489356 NESP48681 1621 aa33.11■■■□□ 2.89
FGD2-208ENST00000489356 WIZO95785 1651 aa33.03■■■□□ 2.88
FGD2-208ENST00000489356 CUX2O14529 1486 aa32.89■■■□□ 2.86
FGD2-208ENST00000489356 RSF1Q96T23 1441 aaPredicted RBP32.87■■■□□ 2.85
FGD2-208ENST00000489356 LAMC3Q9Y6N6 1575 aa32.85■■■□□ 2.85
FGD2-208ENST00000489356 CADPSQ9ULU8 1353 aa32.75■■■□□ 2.83
FGD2-208ENST00000489356 PDS5BQ9NTI5 1447 aa32.73■■■□□ 2.83
FGD2-208ENST00000489356 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
FGD2-208ENST00000489356 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
FGD2-208ENST00000489356 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
FGD2-208ENST00000489356 DNAJC5Q9H3Z4 198 aa32.53■■■□□ 2.8
FGD2-208ENST00000489356 CFTRP13569 1480 aa32.4■■■□□ 2.78
FGD2-208ENST00000489356 MRC2Q9UBG0 1479 aa32.4■■■□□ 2.78
FGD2-208ENST00000489356 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
FGD2-208ENST00000489356 CEP164Q9UPV0 1460 aa32.36■■■□□ 2.77
FGD2-208ENST00000489356 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
FGD2-208ENST00000489356 WDR62O43379 1518 aa32.25■■■□□ 2.75
FGD2-208ENST00000489356 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
FGD2-208ENST00000489356 PRDM2Q13029 1718 aa32■■■□□ 2.71
FGD2-208ENST00000489356 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
FGD2-208ENST00000489356 TOPBP1Q92547 1522 aa31.78■■■□□ 2.68
FGD2-208ENST00000489356 ABCC8Q09428 1581 aa31.72■■■□□ 2.67
FGD2-208ENST00000489356 IFT140Q96RY7 1462 aa31.69■■■□□ 2.66
FGD2-208ENST00000489356 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
FGD2-208ENST00000489356 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
FGD2-208ENST00000489356 OSCARQ8IYS5 282 aa31.59■■■□□ 2.65
FGD2-208ENST00000489356 POLA1P09884 1462 aaPredicted RBP31.48■■■□□ 2.63
FGD2-208ENST00000489356 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.62
FGD2-208ENST00000489356 RAD54L2Q9Y4B4 1467 aa31.42■■■□□ 2.62
FGD2-208ENST00000489356 TRIM41Q8WV44 630 aa31.41■■■□□ 2.62
FGD2-208ENST00000489356 SOGA1O94964 1423 aa31.41■■■□□ 2.62
FGD2-208ENST00000489356 EIF4G3O43432 1585 aaKnown RBP31.41■■■□□ 2.62
FGD2-208ENST00000489356 TARBP1Q13395 1621 aaKnown RBP31.4■■■□□ 2.62
FGD2-208ENST00000489356 CUX1P39880 1505 aa31.36■■■□□ 2.61
FGD2-208ENST00000489356 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
FGD2-208ENST00000489356 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
FGD2-208ENST00000489356 FBLN2P98095 1184 aa31.29■■■□□ 2.6
FGD2-208ENST00000489356 CHD1O14646 1710 aa31.1■■■□□ 2.57
FGD2-208ENST00000489356 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
FGD2-208ENST00000489356 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
FGD2-208ENST00000489356 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
FGD2-208ENST00000489356 GRIN2BQ13224 1484 aa31.04■■■□□ 2.56
FGD2-208ENST00000489356 WRNQ14191 1432 aaPredicted RBP eCLIP31.03■■■□□ 2.56
FGD2-208ENST00000489356 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
FGD2-208ENST00000489356 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
FGD2-208ENST00000489356 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
FGD2-208ENST00000489356 GAPVD1Q14C86 1478 aa31■■■□□ 2.55
FGD2-208ENST00000489356 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
FGD2-208ENST00000489356 ARHGEF11O15085 1522 aa30.97■■■□□ 2.55
FGD2-208ENST00000489356 MAGI1Q96QZ7 1491 aaPredicted RBP30.97■■■□□ 2.55
FGD2-208ENST00000489356 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
FGD2-208ENST00000489356 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
FGD2-208ENST00000489356 BIVM-ERCC5R4GMW8 1640 aa30.89■■■□□ 2.54
FGD2-208ENST00000489356 CYB5RLQ6IPT4 315 aa30.88■■■□□ 2.53
FGD2-208ENST00000489356 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
FGD2-208ENST00000489356 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
FGD2-208ENST00000489356 ABCA5Q8WWZ7 1642 aa30.85■■■□□ 2.53
FGD2-208ENST00000489356 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
FGD2-208ENST00000489356 ARAP1Q96P48 1450 aa30.7■■■□□ 2.5
FGD2-208ENST00000489356 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
FGD2-208ENST00000489356 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
FGD2-208ENST00000489356 FHAD1B1AJZ9 1412 aa30.61■■■□□ 2.49
FGD2-208ENST00000489356 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
FGD2-208ENST00000489356 NUP160Q12769 1436 aa30.49■■■□□ 2.47
FGD2-208ENST00000489356 CEP170Q5SW79 1584 aa30.48■■■□□ 2.47
FGD2-208ENST00000489356 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
FGD2-208ENST00000489356 KIF27Q86VH2 1401 aa30.43■■■□□ 2.46
FGD2-208ENST00000489356 IGF1RP08069 1367 aa30.37■■■□□ 2.45
FGD2-208ENST00000489356 ERCC6L2Q5T890 1561 aa30.35■■■□□ 2.45
FGD2-208ENST00000489356 JPH4Q96JJ6 628 aa30.3■■■□□ 2.44
FGD2-208ENST00000489356 PRG4Q92954 1404 aaPredicted RBP30.25■■■□□ 2.43
FGD2-208ENST00000489356 SHROOM2Q13796 1616 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms