RNA–Protein interactions for RNA: ENST00000489228.1

TFAP2B-203, Transcript of transcription factor AP-2 beta, humanhuman

TSL 2

Gene TFAP2B, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-203ENST00000489228 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
TFAP2B-203ENST00000489228 CCDC180Q9P1Z9 1646 aa35.66■■■■□ 3.3
TFAP2B-203ENST00000489228 ABCC9O60706 1549 aa35.04■■■■□ 3.2
TFAP2B-203ENST00000489228 RB1CC1Q8TDY2 1594 aa33.61■■■□□ 2.97
TFAP2B-203ENST00000489228 NACADO15069 1562 aa33.5■■■□□ 2.95
TFAP2B-203ENST00000489228 DCAF8L2P0C7V8 631 aa33.38■■■□□ 2.93
TFAP2B-203ENST00000489228 ZCCHC6Q5VYS8 1495 aaKnown RBP33.24■■■□□ 2.91
TFAP2B-203ENST00000489228 MYO15BQ96JP2 1530 aa33.2■■■□□ 2.91
TFAP2B-203ENST00000489228 DCAF1Q9Y4B6 1507 aa33■■■□□ 2.87
TFAP2B-203ENST00000489228 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
TFAP2B-203ENST00000489228 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
TFAP2B-203ENST00000489228 BICRAQ9NZM4 1560 aa32.64■■■□□ 2.82
TFAP2B-203ENST00000489228 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
TFAP2B-203ENST00000489228 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
TFAP2B-203ENST00000489228 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
TFAP2B-203ENST00000489228 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
TFAP2B-203ENST00000489228 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
TFAP2B-203ENST00000489228 CECR2Q9BXF3 1484 aa31.48■■■□□ 2.63
TFAP2B-203ENST00000489228 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
TFAP2B-203ENST00000489228 BAZ1AQ9NRL2 1556 aaPredicted RBP30.97■■■□□ 2.55
TFAP2B-203ENST00000489228 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.54
TFAP2B-203ENST00000489228 NCAPD3P42695 1498 aa30.88■■■□□ 2.53
TFAP2B-203ENST00000489228 SMARCA2P51531 1590 aa30.86■■■□□ 2.53
TFAP2B-203ENST00000489228 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
TFAP2B-203ENST00000489228 HMGXB3Q12766 1538 aa30.77■■■□□ 2.52
TFAP2B-203ENST00000489228 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
TFAP2B-203ENST00000489228 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
TFAP2B-203ENST00000489228 WIZO95785 1651 aa30.51■■■□□ 2.47
TFAP2B-203ENST00000489228 RSF1Q96T23 1441 aaPredicted RBP30.32■■■□□ 2.44
TFAP2B-203ENST00000489228 NESP48681 1621 aa30.29■■■□□ 2.44
TFAP2B-203ENST00000489228 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
TFAP2B-203ENST00000489228 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
TFAP2B-203ENST00000489228 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
TFAP2B-203ENST00000489228 KIF21AQ7Z4S6 1674 aa30■■■□□ 2.39
TFAP2B-203ENST00000489228 CADPSQ9ULU8 1353 aa29.96■■■□□ 2.39
TFAP2B-203ENST00000489228 CUX2O14529 1486 aa29.93■■■□□ 2.38
TFAP2B-203ENST00000489228 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
TFAP2B-203ENST00000489228 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
TFAP2B-203ENST00000489228 CFTRP13569 1480 aa29.77■■■□□ 2.36
TFAP2B-203ENST00000489228 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
TFAP2B-203ENST00000489228 PRDM2Q13029 1718 aa29.68■■■□□ 2.34
TFAP2B-203ENST00000489228 FANCD2Q9BXW9 1451 aa29.67■■■□□ 2.34
TFAP2B-203ENST00000489228 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
TFAP2B-203ENST00000489228 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
TFAP2B-203ENST00000489228 WDR62O43379 1518 aa29.58■■■□□ 2.33
TFAP2B-203ENST00000489228 SUPT5HO00267 1087 aaKnown RBP29.49■■■□□ 2.31
TFAP2B-203ENST00000489228 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
TFAP2B-203ENST00000489228 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
TFAP2B-203ENST00000489228 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
TFAP2B-203ENST00000489228 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
TFAP2B-203ENST00000489228 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
TFAP2B-203ENST00000489228 IFT140Q96RY7 1462 aa29.02■■■□□ 2.24
TFAP2B-203ENST00000489228 ZNF608Q9ULD9 1512 aaPredicted RBP28.95■■■□□ 2.23
TFAP2B-203ENST00000489228 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
TFAP2B-203ENST00000489228 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
TFAP2B-203ENST00000489228 CUX1P39880 1505 aa28.91■■■□□ 2.22
TFAP2B-203ENST00000489228 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
TFAP2B-203ENST00000489228 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
TFAP2B-203ENST00000489228 RAD54L2Q9Y4B4 1467 aa28.8■■■□□ 2.2
TFAP2B-203ENST00000489228 SOGA1O94964 1423 aa28.75■■■□□ 2.19
TFAP2B-203ENST00000489228 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.19
TFAP2B-203ENST00000489228 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
TFAP2B-203ENST00000489228 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
TFAP2B-203ENST00000489228 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
TFAP2B-203ENST00000489228 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
TFAP2B-203ENST00000489228 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
TFAP2B-203ENST00000489228 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
TFAP2B-203ENST00000489228 CHD1O14646 1710 aa28.6■■■□□ 2.17
TFAP2B-203ENST00000489228 OSCARQ8IYS5 282 aa28.59■■■□□ 2.17
TFAP2B-203ENST00000489228 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
TFAP2B-203ENST00000489228 ABCA10Q8WWZ4 1543 aa28.52■■■□□ 2.16
TFAP2B-203ENST00000489228 ABCA5Q8WWZ7 1642 aa28.49■■■□□ 2.15
TFAP2B-203ENST00000489228 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
TFAP2B-203ENST00000489228 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
TFAP2B-203ENST00000489228 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
TFAP2B-203ENST00000489228 MAGI1Q96QZ7 1491 aaPredicted RBP28.41■■■□□ 2.14
TFAP2B-203ENST00000489228 FBLN2P98095 1184 aa28.39■■■□□ 2.14
TFAP2B-203ENST00000489228 RIMBP3CA6NJZ7 1639 aa28.3■■■□□ 2.12
TFAP2B-203ENST00000489228 RIMBP3BA6NNM3 1639 aa28.3■■■□□ 2.12
TFAP2B-203ENST00000489228 RIMBP3Q9UFD9 1639 aa28.3■■■□□ 2.12
TFAP2B-203ENST00000489228 SYNJ2O15056 1496 aa28.3■■■□□ 2.12
TFAP2B-203ENST00000489228 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
TFAP2B-203ENST00000489228 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
TFAP2B-203ENST00000489228 ADAMTS12P58397 1594 aa28.23■■■□□ 2.11
TFAP2B-203ENST00000489228 CLASP1Q7Z460 1538 aa28.2■■■□□ 2.1
TFAP2B-203ENST00000489228 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
TFAP2B-203ENST00000489228 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
TFAP2B-203ENST00000489228 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
TFAP2B-203ENST00000489228 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
TFAP2B-203ENST00000489228 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
TFAP2B-203ENST00000489228 KIF27Q86VH2 1401 aa28■■■□□ 2.07
TFAP2B-203ENST00000489228 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
TFAP2B-203ENST00000489228 NUP160Q12769 1436 aa27.98■■■□□ 2.07
TFAP2B-203ENST00000489228 CUL7Q14999 1698 aa27.93■■■□□ 2.06
TFAP2B-203ENST00000489228 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
TFAP2B-203ENST00000489228 IGF1RP08069 1367 aa27.89■■■□□ 2.06
TFAP2B-203ENST00000489228 SHROOM2Q13796 1616 aa27.86■■■□□ 2.05
TFAP2B-203ENST00000489228 ERCC6L2Q5T890 1561 aa27.83■■■□□ 2.05
TFAP2B-203ENST00000489228 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
TFAP2B-203ENST00000489228 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms