RNA–Protein interactions for RNA: ENST00000489201.1

TMPRSS2-210, Transcript of transmembrane serine protease 2, humanhuman

TSL 3

Gene TMPRSS2, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS2-210ENST00000489201 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
TMPRSS2-210ENST00000489201 CCDC180Q9P1Z9 1646 aa26.85■■□□□ 1.89
TMPRSS2-210ENST00000489201 ABCC9O60706 1549 aa26.8■■□□□ 1.88
TMPRSS2-210ENST00000489201 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
TMPRSS2-210ENST00000489201 NACADO15069 1562 aa25.31■■□□□ 1.64
TMPRSS2-210ENST00000489201 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
TMPRSS2-210ENST00000489201 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
TMPRSS2-210ENST00000489201 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
TMPRSS2-210ENST00000489201 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
TMPRSS2-210ENST00000489201 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
TMPRSS2-210ENST00000489201 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
TMPRSS2-210ENST00000489201 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
TMPRSS2-210ENST00000489201 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
TMPRSS2-210ENST00000489201 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
TMPRSS2-210ENST00000489201 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
TMPRSS2-210ENST00000489201 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
TMPRSS2-210ENST00000489201 EIF4G1Q04637 1599 aaKnown RBP24.15■■□□□ 1.46
TMPRSS2-210ENST00000489201 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
TMPRSS2-210ENST00000489201 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
TMPRSS2-210ENST00000489201 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
TMPRSS2-210ENST00000489201 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
TMPRSS2-210ENST00000489201 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
TMPRSS2-210ENST00000489201 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
TMPRSS2-210ENST00000489201 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
TMPRSS2-210ENST00000489201 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
TMPRSS2-210ENST00000489201 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.3
TMPRSS2-210ENST00000489201 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
TMPRSS2-210ENST00000489201 PEG3Q9GZU2 1588 aa23.12■■□□□ 1.29
TMPRSS2-210ENST00000489201 NESP48681 1621 aa23.03■■□□□ 1.28
TMPRSS2-210ENST00000489201 CUX2O14529 1486 aa23.02■■□□□ 1.28
TMPRSS2-210ENST00000489201 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
TMPRSS2-210ENST00000489201 WIZO95785 1651 aa22.87■■□□□ 1.25
TMPRSS2-210ENST00000489201 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
TMPRSS2-210ENST00000489201 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.24
TMPRSS2-210ENST00000489201 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
TMPRSS2-210ENST00000489201 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
TMPRSS2-210ENST00000489201 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.22
TMPRSS2-210ENST00000489201 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
TMPRSS2-210ENST00000489201 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
TMPRSS2-210ENST00000489201 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
TMPRSS2-210ENST00000489201 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
TMPRSS2-210ENST00000489201 WDR62O43379 1518 aa22.46■■□□□ 1.19
TMPRSS2-210ENST00000489201 CFTRP13569 1480 aa22.44■■□□□ 1.18
TMPRSS2-210ENST00000489201 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
TMPRSS2-210ENST00000489201 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
TMPRSS2-210ENST00000489201 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
TMPRSS2-210ENST00000489201 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
TMPRSS2-210ENST00000489201 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
TMPRSS2-210ENST00000489201 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
TMPRSS2-210ENST00000489201 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
TMPRSS2-210ENST00000489201 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
TMPRSS2-210ENST00000489201 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
TMPRSS2-210ENST00000489201 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
TMPRSS2-210ENST00000489201 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
TMPRSS2-210ENST00000489201 DNMBPQ6XZF7 1577 aa21.95■■□□□ 1.11
TMPRSS2-210ENST00000489201 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
TMPRSS2-210ENST00000489201 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
TMPRSS2-210ENST00000489201 CHD1O14646 1710 aa21.8■■□□□ 1.08
TMPRSS2-210ENST00000489201 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
TMPRSS2-210ENST00000489201 RIMBP3CA6NJZ7 1639 aa21.78■■□□□ 1.08
TMPRSS2-210ENST00000489201 RIMBP3BA6NNM3 1639 aa21.78■■□□□ 1.08
TMPRSS2-210ENST00000489201 RIMBP3Q9UFD9 1639 aa21.78■■□□□ 1.08
TMPRSS2-210ENST00000489201 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07
TMPRSS2-210ENST00000489201 CUX1P39880 1505 aa21.73■■□□□ 1.07
TMPRSS2-210ENST00000489201 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
TMPRSS2-210ENST00000489201 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
TMPRSS2-210ENST00000489201 SOGA1O94964 1423 aa21.7■■□□□ 1.06
TMPRSS2-210ENST00000489201 FBLN2P98095 1184 aa21.69■■□□□ 1.06
TMPRSS2-210ENST00000489201 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
TMPRSS2-210ENST00000489201 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
TMPRSS2-210ENST00000489201 WDR97A6NE52 1622 aa21.58■■□□□ 1.04
TMPRSS2-210ENST00000489201 SNAPC4Q5SXM2 1469 aa21.57■■□□□ 1.04
TMPRSS2-210ENST00000489201 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
TMPRSS2-210ENST00000489201 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
TMPRSS2-210ENST00000489201 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
TMPRSS2-210ENST00000489201 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
TMPRSS2-210ENST00000489201 ABCA10Q8WWZ4 1543 aa21.48■■□□□ 1.03
TMPRSS2-210ENST00000489201 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
TMPRSS2-210ENST00000489201 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
TMPRSS2-210ENST00000489201 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
TMPRSS2-210ENST00000489201 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
TMPRSS2-210ENST00000489201 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
TMPRSS2-210ENST00000489201 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
TMPRSS2-210ENST00000489201 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
TMPRSS2-210ENST00000489201 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
TMPRSS2-210ENST00000489201 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
TMPRSS2-210ENST00000489201 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
TMPRSS2-210ENST00000489201 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
TMPRSS2-210ENST00000489201 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
TMPRSS2-210ENST00000489201 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
TMPRSS2-210ENST00000489201 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
TMPRSS2-210ENST00000489201 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
TMPRSS2-210ENST00000489201 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
TMPRSS2-210ENST00000489201 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
TMPRSS2-210ENST00000489201 ERCC6L2Q5T890 1561 aa21.12■□□□□ 0.97
TMPRSS2-210ENST00000489201 NUP160Q12769 1436 aa21.12■□□□□ 0.97
TMPRSS2-210ENST00000489201 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
TMPRSS2-210ENST00000489201 SHROOM2Q13796 1616 aa21.05■□□□□ 0.96
TMPRSS2-210ENST00000489201 IGF1RP08069 1367 aa21.01■□□□□ 0.95
TMPRSS2-210ENST00000489201 CUL7Q14999 1698 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms