RNA–Protein interactions for RNA: ENST00000489174.1

C2orf40-205, Transcript of chromosome 2 open reading frame 40, humanhuman

TSL 4

Gene C2orf40, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf40-205ENST00000489174 NISCHQ9Y2I1 1504 aa30.09■■■□□ 2.41
C2orf40-205ENST00000489174 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
C2orf40-205ENST00000489174 ABCC9O60706 1549 aa26.82■■□□□ 1.88
C2orf40-205ENST00000489174 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
C2orf40-205ENST00000489174 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
C2orf40-205ENST00000489174 NACADO15069 1562 aa25.48■■□□□ 1.67
C2orf40-205ENST00000489174 MYO15BQ96JP2 1530 aa25.13■■□□□ 1.61
C2orf40-205ENST00000489174 PABPN1Q86U42 306 aaKnown RBP eCLIP25■■□□□ 1.59
C2orf40-205ENST00000489174 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
C2orf40-205ENST00000489174 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
C2orf40-205ENST00000489174 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
C2orf40-205ENST00000489174 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
C2orf40-205ENST00000489174 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
C2orf40-205ENST00000489174 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
C2orf40-205ENST00000489174 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
C2orf40-205ENST00000489174 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
C2orf40-205ENST00000489174 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
C2orf40-205ENST00000489174 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
C2orf40-205ENST00000489174 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
C2orf40-205ENST00000489174 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
C2orf40-205ENST00000489174 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
C2orf40-205ENST00000489174 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
C2orf40-205ENST00000489174 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.33
C2orf40-205ENST00000489174 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
C2orf40-205ENST00000489174 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
C2orf40-205ENST00000489174 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
C2orf40-205ENST00000489174 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
C2orf40-205ENST00000489174 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
C2orf40-205ENST00000489174 CUX2O14529 1486 aa23.08■■□□□ 1.29
C2orf40-205ENST00000489174 NESP48681 1621 aa23.04■■□□□ 1.28
C2orf40-205ENST00000489174 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
C2orf40-205ENST00000489174 WIZO95785 1651 aa22.92■■□□□ 1.26
C2orf40-205ENST00000489174 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
C2orf40-205ENST00000489174 PDS5BQ9NTI5 1447 aa22.87■■□□□ 1.25
C2orf40-205ENST00000489174 CADPSQ9ULU8 1353 aa22.8■■□□□ 1.24
C2orf40-205ENST00000489174 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
C2orf40-205ENST00000489174 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
C2orf40-205ENST00000489174 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
C2orf40-205ENST00000489174 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
C2orf40-205ENST00000489174 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
C2orf40-205ENST00000489174 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.2
C2orf40-205ENST00000489174 CFTRP13569 1480 aa22.54■■□□□ 1.2
C2orf40-205ENST00000489174 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
C2orf40-205ENST00000489174 WDR62O43379 1518 aa22.52■■□□□ 1.19
C2orf40-205ENST00000489174 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
C2orf40-205ENST00000489174 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
C2orf40-205ENST00000489174 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
C2orf40-205ENST00000489174 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
C2orf40-205ENST00000489174 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
C2orf40-205ENST00000489174 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
C2orf40-205ENST00000489174 OSCARQ8IYS5 282 aa22.11■■□□□ 1.13
C2orf40-205ENST00000489174 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
C2orf40-205ENST00000489174 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
C2orf40-205ENST00000489174 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
C2orf40-205ENST00000489174 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
C2orf40-205ENST00000489174 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
C2orf40-205ENST00000489174 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
C2orf40-205ENST00000489174 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
C2orf40-205ENST00000489174 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.09
C2orf40-205ENST00000489174 SOGA1O94964 1423 aa21.85■■□□□ 1.09
C2orf40-205ENST00000489174 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
C2orf40-205ENST00000489174 FBLN2P98095 1184 aa21.8■■□□□ 1.08
C2orf40-205ENST00000489174 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
C2orf40-205ENST00000489174 CUX1P39880 1505 aa21.75■■□□□ 1.07
C2orf40-205ENST00000489174 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
C2orf40-205ENST00000489174 CHD1O14646 1710 aa21.75■■□□□ 1.07
C2orf40-205ENST00000489174 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
C2orf40-205ENST00000489174 RIMBP3CA6NJZ7 1639 aa21.72■■□□□ 1.07
C2orf40-205ENST00000489174 RIMBP3BA6NNM3 1639 aa21.72■■□□□ 1.07
C2orf40-205ENST00000489174 RIMBP3Q9UFD9 1639 aa21.72■■□□□ 1.07
C2orf40-205ENST00000489174 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
C2orf40-205ENST00000489174 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
C2orf40-205ENST00000489174 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.06
C2orf40-205ENST00000489174 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
C2orf40-205ENST00000489174 MAGI1Q96QZ7 1491 aaPredicted RBP21.61■■□□□ 1.05
C2orf40-205ENST00000489174 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
C2orf40-205ENST00000489174 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
C2orf40-205ENST00000489174 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
C2orf40-205ENST00000489174 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
C2orf40-205ENST00000489174 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
C2orf40-205ENST00000489174 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
C2orf40-205ENST00000489174 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
C2orf40-205ENST00000489174 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
C2orf40-205ENST00000489174 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
C2orf40-205ENST00000489174 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
C2orf40-205ENST00000489174 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
C2orf40-205ENST00000489174 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
C2orf40-205ENST00000489174 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
C2orf40-205ENST00000489174 GRIN2AQ12879 1464 aa21.33■■□□□ 1.01
C2orf40-205ENST00000489174 ADAMTS12P58397 1594 aa21.31■■□□□ 1
C2orf40-205ENST00000489174 FHAD1B1AJZ9 1412 aa21.31■■□□□ 1
C2orf40-205ENST00000489174 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
C2orf40-205ENST00000489174 NUP160Q12769 1436 aa21.22■□□□□ 0.99
C2orf40-205ENST00000489174 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
C2orf40-205ENST00000489174 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
C2orf40-205ENST00000489174 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
C2orf40-205ENST00000489174 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
C2orf40-205ENST00000489174 JPH4Q96JJ6 628 aa21.09■□□□□ 0.97
C2orf40-205ENST00000489174 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
C2orf40-205ENST00000489174 CUL7Q14999 1698 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms