RNA–Protein interactions for RNA: ENST00000489138.5

ZDHHC4-210, Transcript of zinc finger DHHC-type containing 4, humanhuman

TSL 3

Gene ZDHHC4, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC4-210ENST00000489138 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
ZDHHC4-210ENST00000489138 ABCC9O60706 1549 aa37.09■■■■□ 3.53
ZDHHC4-210ENST00000489138 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
ZDHHC4-210ENST00000489138 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
ZDHHC4-210ENST00000489138 DNAJC5BQ9UF47 199 aa35.01■■■■□ 3.2
ZDHHC4-210ENST00000489138 DCAF8L2P0C7V8 631 aa34.82■■■■□ 3.16
ZDHHC4-210ENST00000489138 NACADO15069 1562 aa34.81■■■■□ 3.16
ZDHHC4-210ENST00000489138 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
ZDHHC4-210ENST00000489138 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
ZDHHC4-210ENST00000489138 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
ZDHHC4-210ENST00000489138 BICRAQ9NZM4 1560 aa34.12■■■■□ 3.05
ZDHHC4-210ENST00000489138 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
ZDHHC4-210ENST00000489138 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
ZDHHC4-210ENST00000489138 SCRIBQ14160 1630 aa33.58■■■□□ 2.97
ZDHHC4-210ENST00000489138 SHROOM4Q9ULL8 1493 aa33.53■■■□□ 2.96
ZDHHC4-210ENST00000489138 CC2D2AQ9P2K1 1620 aa33.44■■■□□ 2.94
ZDHHC4-210ENST00000489138 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
ZDHHC4-210ENST00000489138 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
ZDHHC4-210ENST00000489138 DNAJC5Q9H3Z4 198 aa32.23■■■□□ 2.75
ZDHHC4-210ENST00000489138 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
ZDHHC4-210ENST00000489138 ATAD2BQ9ULI0 1458 aa32.07■■■□□ 2.72
ZDHHC4-210ENST00000489138 ERCC6Q03468 1493 aa32.02■■■□□ 2.72
ZDHHC4-210ENST00000489138 SMARCA4P51532 1647 aa31.97■■■□□ 2.71
ZDHHC4-210ENST00000489138 CUX2O14529 1486 aa31.95■■■□□ 2.7
ZDHHC4-210ENST00000489138 SMARCA2P51531 1590 aa31.93■■■□□ 2.7
ZDHHC4-210ENST00000489138 HMGXB3Q12766 1538 aa31.87■■■□□ 2.69
ZDHHC4-210ENST00000489138 NESP48681 1621 aa31.8■■■□□ 2.68
ZDHHC4-210ENST00000489138 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
ZDHHC4-210ENST00000489138 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
ZDHHC4-210ENST00000489138 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
ZDHHC4-210ENST00000489138 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
ZDHHC4-210ENST00000489138 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
ZDHHC4-210ENST00000489138 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
ZDHHC4-210ENST00000489138 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
ZDHHC4-210ENST00000489138 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
ZDHHC4-210ENST00000489138 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
ZDHHC4-210ENST00000489138 WIZO95785 1651 aa31.19■■■□□ 2.58
ZDHHC4-210ENST00000489138 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
ZDHHC4-210ENST00000489138 WDR62O43379 1518 aa30.96■■■□□ 2.55
ZDHHC4-210ENST00000489138 CEP164Q9UPV0 1460 aa30.9■■■□□ 2.54
ZDHHC4-210ENST00000489138 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
ZDHHC4-210ENST00000489138 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
ZDHHC4-210ENST00000489138 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
ZDHHC4-210ENST00000489138 CFTRP13569 1480 aa30.79■■■□□ 2.52
ZDHHC4-210ENST00000489138 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
ZDHHC4-210ENST00000489138 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
ZDHHC4-210ENST00000489138 OSCARQ8IYS5 282 aa30.55■■■□□ 2.48
ZDHHC4-210ENST00000489138 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
ZDHHC4-210ENST00000489138 PRDM2Q13029 1718 aa30.4■■■□□ 2.46
ZDHHC4-210ENST00000489138 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
ZDHHC4-210ENST00000489138 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
ZDHHC4-210ENST00000489138 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
ZDHHC4-210ENST00000489138 RIMBP3CA6NJZ7 1639 aa30.13■■■□□ 2.41
ZDHHC4-210ENST00000489138 RIMBP3BA6NNM3 1639 aa30.13■■■□□ 2.41
ZDHHC4-210ENST00000489138 RIMBP3Q9UFD9 1639 aa30.13■■■□□ 2.41
ZDHHC4-210ENST00000489138 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
ZDHHC4-210ENST00000489138 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
ZDHHC4-210ENST00000489138 EIF4G3O43432 1585 aaKnown RBP30.07■■■□□ 2.4
ZDHHC4-210ENST00000489138 AQRO60306 1485 aaKnown RBP eCLIP30.02■■■□□ 2.4
ZDHHC4-210ENST00000489138 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
ZDHHC4-210ENST00000489138 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
ZDHHC4-210ENST00000489138 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
ZDHHC4-210ENST00000489138 FBLN2P98095 1184 aa29.93■■■□□ 2.38
ZDHHC4-210ENST00000489138 CYB5RLQ6IPT4 315 aa29.9■■■□□ 2.38
ZDHHC4-210ENST00000489138 CHD1O14646 1710 aa29.89■■■□□ 2.38
ZDHHC4-210ENST00000489138 RAD54L2Q9Y4B4 1467 aa29.88■■■□□ 2.37
ZDHHC4-210ENST00000489138 SOGA1O94964 1423 aa29.82■■■□□ 2.36
ZDHHC4-210ENST00000489138 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.36
ZDHHC4-210ENST00000489138 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
ZDHHC4-210ENST00000489138 ARAP1Q96P48 1450 aa29.72■■■□□ 2.35
ZDHHC4-210ENST00000489138 SNAPC4Q5SXM2 1469 aa29.68■■■□□ 2.34
ZDHHC4-210ENST00000489138 CUX1P39880 1505 aa29.66■■■□□ 2.34
ZDHHC4-210ENST00000489138 TRHP20396 242 aaPredicted RBP29.65■■■□□ 2.34
ZDHHC4-210ENST00000489138 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
ZDHHC4-210ENST00000489138 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
ZDHHC4-210ENST00000489138 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
ZDHHC4-210ENST00000489138 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
ZDHHC4-210ENST00000489138 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
ZDHHC4-210ENST00000489138 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
ZDHHC4-210ENST00000489138 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
ZDHHC4-210ENST00000489138 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
ZDHHC4-210ENST00000489138 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
ZDHHC4-210ENST00000489138 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
ZDHHC4-210ENST00000489138 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
ZDHHC4-210ENST00000489138 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
ZDHHC4-210ENST00000489138 WRNQ14191 1432 aaPredicted RBP eCLIP29.21■■■□□ 2.27
ZDHHC4-210ENST00000489138 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
ZDHHC4-210ENST00000489138 ERCC6L2Q5T890 1561 aa29.13■■■□□ 2.25
ZDHHC4-210ENST00000489138 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
ZDHHC4-210ENST00000489138 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
ZDHHC4-210ENST00000489138 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
ZDHHC4-210ENST00000489138 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
ZDHHC4-210ENST00000489138 NUP160Q12769 1436 aa29.06■■■□□ 2.24
ZDHHC4-210ENST00000489138 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
ZDHHC4-210ENST00000489138 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
ZDHHC4-210ENST00000489138 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
ZDHHC4-210ENST00000489138 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
ZDHHC4-210ENST00000489138 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
ZDHHC4-210ENST00000489138 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
ZDHHC4-210ENST00000489138 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms