RNA–Protein interactions for RNA: ENST00000489127.1

NGEF-209, Transcript of neuronal guanine nucleotide exchange factor, humanhuman

TSL 5

Gene NGEF, Length 590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGEF-209ENST00000489127 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
NGEF-209ENST00000489127 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
NGEF-209ENST00000489127 ABCC9O60706 1549 aa33.4■■■□□ 2.94
NGEF-209ENST00000489127 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
NGEF-209ENST00000489127 NACADO15069 1562 aa31.6■■■□□ 2.65
NGEF-209ENST00000489127 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
NGEF-209ENST00000489127 DNAJC5BQ9UF47 199 aa31.21■■■□□ 2.59
NGEF-209ENST00000489127 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
NGEF-209ENST00000489127 PABPN1Q86U42 306 aaKnown RBP eCLIP31.12■■■□□ 2.57
NGEF-209ENST00000489127 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
NGEF-209ENST00000489127 ZCCHC6Q5VYS8 1495 aaKnown RBP30.92■■■□□ 2.54
NGEF-209ENST00000489127 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
NGEF-209ENST00000489127 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
NGEF-209ENST00000489127 SCRIBQ14160 1630 aa30.51■■■□□ 2.47
NGEF-209ENST00000489127 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.47
NGEF-209ENST00000489127 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
NGEF-209ENST00000489127 EIF4G1Q04637 1599 aaKnown RBP30.1■■■□□ 2.41
NGEF-209ENST00000489127 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
NGEF-209ENST00000489127 NCAPD3P42695 1498 aa29.16■■■□□ 2.26
NGEF-209ENST00000489127 ATAD2BQ9ULI0 1458 aa29.09■■■□□ 2.25
NGEF-209ENST00000489127 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
NGEF-209ENST00000489127 SMARCA2P51531 1590 aa29.03■■■□□ 2.24
NGEF-209ENST00000489127 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
NGEF-209ENST00000489127 HMGXB3Q12766 1538 aa28.95■■■□□ 2.23
NGEF-209ENST00000489127 ERCC6Q03468 1493 aa28.87■■■□□ 2.21
NGEF-209ENST00000489127 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
NGEF-209ENST00000489127 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
NGEF-209ENST00000489127 CUX2O14529 1486 aa28.74■■■□□ 2.19
NGEF-209ENST00000489127 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
NGEF-209ENST00000489127 NESP48681 1621 aa28.69■■■□□ 2.18
NGEF-209ENST00000489127 DNAJC5Q9H3Z4 198 aa28.63■■■□□ 2.17
NGEF-209ENST00000489127 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
NGEF-209ENST00000489127 WIZO95785 1651 aa28.39■■■□□ 2.14
NGEF-209ENST00000489127 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
NGEF-209ENST00000489127 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
NGEF-209ENST00000489127 KIF21AQ7Z4S6 1674 aa28.31■■■□□ 2.12
NGEF-209ENST00000489127 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
NGEF-209ENST00000489127 RSF1Q96T23 1441 aaPredicted RBP28.18■■■□□ 2.1
NGEF-209ENST00000489127 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
NGEF-209ENST00000489127 TOP2AP11388 1531 aaKnown RBP28.06■■■□□ 2.08
NGEF-209ENST00000489127 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
NGEF-209ENST00000489127 WDR62O43379 1518 aa28.01■■■□□ 2.07
NGEF-209ENST00000489127 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
NGEF-209ENST00000489127 CFTRP13569 1480 aa27.97■■■□□ 2.07
NGEF-209ENST00000489127 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
NGEF-209ENST00000489127 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
NGEF-209ENST00000489127 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
NGEF-209ENST00000489127 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
NGEF-209ENST00000489127 OSCARQ8IYS5 282 aa27.47■■□□□ 1.99
NGEF-209ENST00000489127 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
NGEF-209ENST00000489127 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
NGEF-209ENST00000489127 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
NGEF-209ENST00000489127 ZNF608Q9ULD9 1512 aaPredicted RBP27.38■■□□□ 1.97
NGEF-209ENST00000489127 DNMBPQ6XZF7 1577 aa27.36■■□□□ 1.97
NGEF-209ENST00000489127 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
NGEF-209ENST00000489127 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
NGEF-209ENST00000489127 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
NGEF-209ENST00000489127 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.941e-8■■■□□ 16.2
NGEF-209ENST00000489127 RAD54L2Q9Y4B4 1467 aa27.09■■□□□ 1.93
NGEF-209ENST00000489127 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
NGEF-209ENST00000489127 SOGA1O94964 1423 aa27.07■■□□□ 1.92
NGEF-209ENST00000489127 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
NGEF-209ENST00000489127 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
NGEF-209ENST00000489127 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
NGEF-209ENST00000489127 FBLN2P98095 1184 aa27.04■■□□□ 1.92
NGEF-209ENST00000489127 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
NGEF-209ENST00000489127 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
NGEF-209ENST00000489127 CHD1O14646 1710 aa27.01■■□□□ 1.91
NGEF-209ENST00000489127 ARHGEF11O15085 1522 aa27■■□□□ 1.91
NGEF-209ENST00000489127 CUX1P39880 1505 aa27■■□□□ 1.91
NGEF-209ENST00000489127 WDR97A6NE52 1622 aa26.92■■□□□ 1.9
NGEF-209ENST00000489127 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
NGEF-209ENST00000489127 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
NGEF-209ENST00000489127 CYB5RLQ6IPT4 315 aa26.83■■□□□ 1.89
NGEF-209ENST00000489127 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
NGEF-209ENST00000489127 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
NGEF-209ENST00000489127 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
NGEF-209ENST00000489127 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
NGEF-209ENST00000489127 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
NGEF-209ENST00000489127 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
NGEF-209ENST00000489127 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
NGEF-209ENST00000489127 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
NGEF-209ENST00000489127 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.86
NGEF-209ENST00000489127 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
NGEF-209ENST00000489127 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
NGEF-209ENST00000489127 TOP2BQ02880 1626 aa26.58■■□□□ 1.85
NGEF-209ENST00000489127 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
NGEF-209ENST00000489127 TRHP20396 242 aaPredicted RBP26.56■■□□□ 1.84
NGEF-209ENST00000489127 GRIN2AQ12879 1464 aa26.48■■□□□ 1.83
NGEF-209ENST00000489127 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
NGEF-209ENST00000489127 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
NGEF-209ENST00000489127 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
NGEF-209ENST00000489127 NUP160Q12769 1436 aa26.37■■□□□ 1.81
NGEF-209ENST00000489127 CEP170Q5SW79 1584 aa26.37■■□□□ 1.81
NGEF-209ENST00000489127 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
NGEF-209ENST00000489127 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
NGEF-209ENST00000489127 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.78
NGEF-209ENST00000489127 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
NGEF-209ENST00000489127 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
NGEF-209ENST00000489127 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms