RNA–Protein interactions for RNA: ENST00000489088.5

EXOSC8-209, Transcript of exosome component 8, humanhuman

TSL 3

Gene EXOSC8, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-209ENST00000489088 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
EXOSC8-209ENST00000489088 CCDC180Q9P1Z9 1646 aa42.74■■■■■ 4.43
EXOSC8-209ENST00000489088 ABCC9O60706 1549 aa42.46■■■■■ 4.39
EXOSC8-209ENST00000489088 RB1CC1Q8TDY2 1594 aa40.54■■■■■ 4.08
EXOSC8-209ENST00000489088 NACADO15069 1562 aa40.35■■■■■ 4.05
EXOSC8-209ENST00000489088 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
EXOSC8-209ENST00000489088 MYO15BQ96JP2 1530 aa39.92■■■■□ 3.98
EXOSC8-209ENST00000489088 ZCCHC6Q5VYS8 1495 aaKnown RBP39.69■■■■□ 3.94
EXOSC8-209ENST00000489088 UNC13AQ9UPW8 1703 aa39.65■■■■□ 3.94
EXOSC8-209ENST00000489088 PABPN1Q86U42 306 aaKnown RBP eCLIP39.64■■■■□ 3.94
EXOSC8-209ENST00000489088 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
EXOSC8-209ENST00000489088 DCAF1Q9Y4B6 1507 aa39.54■■■■□ 3.92
EXOSC8-209ENST00000489088 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.9
EXOSC8-209ENST00000489088 SCRIBQ14160 1630 aa38.96■■■■□ 3.83
EXOSC8-209ENST00000489088 SHROOM4Q9ULL8 1493 aa38.83■■■■□ 3.81
EXOSC8-209ENST00000489088 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
EXOSC8-209ENST00000489088 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
EXOSC8-209ENST00000489088 CECR2Q9BXF3 1484 aa38.21■■■■□ 3.71
EXOSC8-209ENST00000489088 NCAPD3P42695 1498 aa37.29■■■■□ 3.56
EXOSC8-209ENST00000489088 SMARCA4P51532 1647 aa37.23■■■■□ 3.55
EXOSC8-209ENST00000489088 ATAD2BQ9ULI0 1458 aa37.21■■■■□ 3.55
EXOSC8-209ENST00000489088 BAZ1AQ9NRL2 1556 aaPredicted RBP37.09■■■■□ 3.53
EXOSC8-209ENST00000489088 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
EXOSC8-209ENST00000489088 HMGXB3Q12766 1538 aa36.99■■■■□ 3.51
EXOSC8-209ENST00000489088 MROH2BQ7Z745 1585 aa36.89■■■■□ 3.5
EXOSC8-209ENST00000489088 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
EXOSC8-209ENST00000489088 BAZ1BQ9UIG0 1483 aaKnown RBP36.83■■■■□ 3.49
EXOSC8-209ENST00000489088 ERCC6Q03468 1493 aa36.59■■■■□ 3.45
EXOSC8-209ENST00000489088 NESP48681 1621 aa36.59■■■■□ 3.45
EXOSC8-209ENST00000489088 WIZO95785 1651 aa36.45■■■■□ 3.42
EXOSC8-209ENST00000489088 CUX2O14529 1486 aa36.43■■■■□ 3.42
EXOSC8-209ENST00000489088 LAMC3Q9Y6N6 1575 aa36.36■■■■□ 3.41
EXOSC8-209ENST00000489088 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.4
EXOSC8-209ENST00000489088 CADPSQ9ULU8 1353 aa36.17■■■■□ 3.38
EXOSC8-209ENST00000489088 PDS5BQ9NTI5 1447 aa36.15■■■■□ 3.38
EXOSC8-209ENST00000489088 DNAJC5Q9H3Z4 198 aa36.12■■■■□ 3.37
EXOSC8-209ENST00000489088 THOC2Q8NI27 1593 aaKnown RBP36.1■■■■□ 3.37
EXOSC8-209ENST00000489088 KIF21AQ7Z4S6 1674 aa36.09■■■■□ 3.37
EXOSC8-209ENST00000489088 TOP2AP11388 1531 aaKnown RBP35.98■■■■□ 3.35
EXOSC8-209ENST00000489088 CFTRP13569 1480 aa35.82■■■■□ 3.32
EXOSC8-209ENST00000489088 MRC2Q9UBG0 1479 aa35.8■■■■□ 3.32
EXOSC8-209ENST00000489088 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
EXOSC8-209ENST00000489088 CEP164Q9UPV0 1460 aa35.72■■■■□ 3.31
EXOSC8-209ENST00000489088 WDR62O43379 1518 aa35.69■■■■□ 3.3
EXOSC8-209ENST00000489088 CCDC88BA6NC98 1476 aa35.62■■■■□ 3.29
EXOSC8-209ENST00000489088 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
EXOSC8-209ENST00000489088 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
EXOSC8-209ENST00000489088 TOPBP1Q92547 1522 aa35.1■■■■□ 3.21
EXOSC8-209ENST00000489088 ABCC8Q09428 1581 aa35.05■■■■□ 3.2
EXOSC8-209ENST00000489088 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
EXOSC8-209ENST00000489088 DNMBPQ6XZF7 1577 aa34.98■■■■□ 3.19
EXOSC8-209ENST00000489088 ZNF608Q9ULD9 1512 aaPredicted RBP34.94■■■■□ 3.18
EXOSC8-209ENST00000489088 SUPT5HO00267 1087 aaKnown RBP34.92■■■■□ 3.18
EXOSC8-209ENST00000489088 OSCARQ8IYS5 282 aa34.9■■■■□ 3.18
EXOSC8-209ENST00000489088 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
EXOSC8-209ENST00000489088 POLA1P09884 1462 aaPredicted RBP34.76■■■■□ 3.15
EXOSC8-209ENST00000489088 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
EXOSC8-209ENST00000489088 AQRO60306 1485 aaKnown RBP eCLIP34.69■■■■□ 3.144e-8■■■■■ 33.6
EXOSC8-209ENST00000489088 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
EXOSC8-209ENST00000489088 TRIM41Q8WV44 630 aa34.64■■■■□ 3.14
EXOSC8-209ENST00000489088 SOGA1O94964 1423 aa34.64■■■■□ 3.14
EXOSC8-209ENST00000489088 CUX1P39880 1505 aa34.62■■■■□ 3.13
EXOSC8-209ENST00000489088 FGD5Q6ZNL6 1462 aa34.58■■■■□ 3.13
EXOSC8-209ENST00000489088 TDRD9Q8NDG6 1382 aaKnown RBP34.53■■■■□ 3.12
EXOSC8-209ENST00000489088 CHD1O14646 1710 aa34.41■■■■□ 3.1
EXOSC8-209ENST00000489088 FBLN2P98095 1184 aa34.39■■■■□ 3.1
EXOSC8-209ENST00000489088 WDR97A6NE52 1622 aa34.39■■■■□ 3.1
EXOSC8-209ENST00000489088 RIMBP3CA6NJZ7 1639 aa34.34■■■■□ 3.09
EXOSC8-209ENST00000489088 RIMBP3BA6NNM3 1639 aa34.34■■■■□ 3.09
EXOSC8-209ENST00000489088 RIMBP3Q9UFD9 1639 aa34.34■■■■□ 3.09
EXOSC8-209ENST00000489088 SNAPC4Q5SXM2 1469 aa34.29■■■■□ 3.08
EXOSC8-209ENST00000489088 ARHGEF11O15085 1522 aa34.27■■■■□ 3.08
EXOSC8-209ENST00000489088 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
EXOSC8-209ENST00000489088 MAGI1Q96QZ7 1491 aaPredicted RBP34.21■■■■□ 3.07
EXOSC8-209ENST00000489088 ABCA10Q8WWZ4 1543 aa34.21■■■■□ 3.07
EXOSC8-209ENST00000489088 CHMP7Q8WUX9 453 aaPredicted RBP34.2■■■■□ 3.07
EXOSC8-209ENST00000489088 GAPVD1Q14C86 1478 aa34.2■■■■□ 3.06
EXOSC8-209ENST00000489088 WRNQ14191 1432 aaPredicted RBP eCLIP34.16■■■■□ 3.06
EXOSC8-209ENST00000489088 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
EXOSC8-209ENST00000489088 BIVM-ERCC5R4GMW8 1640 aa34.14■■■■□ 3.06
EXOSC8-209ENST00000489088 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
EXOSC8-209ENST00000489088 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
EXOSC8-209ENST00000489088 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
EXOSC8-209ENST00000489088 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
EXOSC8-209ENST00000489088 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
EXOSC8-209ENST00000489088 CLASP1Q7Z460 1538 aa34.03■■■■□ 3.04
EXOSC8-209ENST00000489088 ARAP1Q96P48 1450 aa33.96■■■■□ 3.03
EXOSC8-209ENST00000489088 GRIN2AQ12879 1464 aa33.82■■■■□ 3.01
EXOSC8-209ENST00000489088 ADAMTS12P58397 1594 aa33.81■■■■□ 3
EXOSC8-209ENST00000489088 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
EXOSC8-209ENST00000489088 FHAD1B1AJZ9 1412 aa33.78■■■■□ 3
EXOSC8-209ENST00000489088 NUP160Q12769 1436 aa33.7■■■□□ 2.99
EXOSC8-209ENST00000489088 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
EXOSC8-209ENST00000489088 ERCC6L2Q5T890 1561 aa33.55■■■□□ 2.96
EXOSC8-209ENST00000489088 TRHP20396 242 aaPredicted RBP33.54■■■□□ 2.96
EXOSC8-209ENST00000489088 SHROOM2Q13796 1616 aa33.51■■■□□ 2.96
EXOSC8-209ENST00000489088 IGF1RP08069 1367 aa33.5■■■□□ 2.95
EXOSC8-209ENST00000489088 KIF27Q86VH2 1401 aa33.5■■■□□ 2.95
EXOSC8-209ENST00000489088 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
EXOSC8-209ENST00000489088 PRG4Q92954 1404 aaPredicted RBP33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms