RNA–Protein interactions for RNA: ENST00000489042.1

FBXO18-214, Transcript of F-box DNA helicase 1, humanhuman

TSL 3

Gene FBXO18, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO18-214ENST00000489042 NISCHQ9Y2I1 1504 aa32.85■■■□□ 2.85
FBXO18-214ENST00000489042 ABCC9O60706 1549 aa29.56■■■□□ 2.32
FBXO18-214ENST00000489042 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
FBXO18-214ENST00000489042 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
FBXO18-214ENST00000489042 NACADO15069 1562 aa27.79■■■□□ 2.04
FBXO18-214ENST00000489042 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
FBXO18-214ENST00000489042 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
FBXO18-214ENST00000489042 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
FBXO18-214ENST00000489042 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
FBXO18-214ENST00000489042 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
FBXO18-214ENST00000489042 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
FBXO18-214ENST00000489042 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
FBXO18-214ENST00000489042 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
FBXO18-214ENST00000489042 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
FBXO18-214ENST00000489042 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
FBXO18-214ENST00000489042 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
FBXO18-214ENST00000489042 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
FBXO18-214ENST00000489042 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
FBXO18-214ENST00000489042 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
FBXO18-214ENST00000489042 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
FBXO18-214ENST00000489042 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
FBXO18-214ENST00000489042 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
FBXO18-214ENST00000489042 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
FBXO18-214ENST00000489042 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
FBXO18-214ENST00000489042 NESP48681 1621 aa25.45■■□□□ 1.66
FBXO18-214ENST00000489042 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
FBXO18-214ENST00000489042 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
FBXO18-214ENST00000489042 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
FBXO18-214ENST00000489042 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
FBXO18-214ENST00000489042 CUX2O14529 1486 aa25.28■■□□□ 1.64
FBXO18-214ENST00000489042 DNAJC5Q9H3Z4 198 aa25.25■■□□□ 1.63
FBXO18-214ENST00000489042 WIZO95785 1651 aa25.18■■□□□ 1.62
FBXO18-214ENST00000489042 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
FBXO18-214ENST00000489042 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
FBXO18-214ENST00000489042 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
FBXO18-214ENST00000489042 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
FBXO18-214ENST00000489042 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
FBXO18-214ENST00000489042 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
FBXO18-214ENST00000489042 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
FBXO18-214ENST00000489042 WDR62O43379 1518 aa24.72■■□□□ 1.55
FBXO18-214ENST00000489042 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
FBXO18-214ENST00000489042 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
FBXO18-214ENST00000489042 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
FBXO18-214ENST00000489042 CFTRP13569 1480 aa24.6■■□□□ 1.53
FBXO18-214ENST00000489042 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
FBXO18-214ENST00000489042 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
FBXO18-214ENST00000489042 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
FBXO18-214ENST00000489042 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
FBXO18-214ENST00000489042 ZNF608Q9ULD9 1512 aaPredicted RBP24.25■■□□□ 1.47
FBXO18-214ENST00000489042 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
FBXO18-214ENST00000489042 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
FBXO18-214ENST00000489042 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
FBXO18-214ENST00000489042 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
FBXO18-214ENST00000489042 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
FBXO18-214ENST00000489042 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
FBXO18-214ENST00000489042 CHD1O14646 1710 aa24.02■■□□□ 1.44
FBXO18-214ENST00000489042 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
FBXO18-214ENST00000489042 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
FBXO18-214ENST00000489042 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
FBXO18-214ENST00000489042 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.43
FBXO18-214ENST00000489042 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
FBXO18-214ENST00000489042 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
FBXO18-214ENST00000489042 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
FBXO18-214ENST00000489042 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
FBXO18-214ENST00000489042 CUX1P39880 1505 aa23.87■■□□□ 1.41
FBXO18-214ENST00000489042 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
FBXO18-214ENST00000489042 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
FBXO18-214ENST00000489042 SOGA1O94964 1423 aa23.81■■□□□ 1.4
FBXO18-214ENST00000489042 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
FBXO18-214ENST00000489042 FBLN2P98095 1184 aa23.8■■□□□ 1.4
FBXO18-214ENST00000489042 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
FBXO18-214ENST00000489042 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
FBXO18-214ENST00000489042 PBRM1Q86U86 1689 aa23.7■■□□□ 1.39
FBXO18-214ENST00000489042 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
FBXO18-214ENST00000489042 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
FBXO18-214ENST00000489042 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
FBXO18-214ENST00000489042 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
FBXO18-214ENST00000489042 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
FBXO18-214ENST00000489042 ABCA5Q8WWZ7 1642 aa23.56■■□□□ 1.36
FBXO18-214ENST00000489042 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
FBXO18-214ENST00000489042 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
FBXO18-214ENST00000489042 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
FBXO18-214ENST00000489042 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
FBXO18-214ENST00000489042 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
FBXO18-214ENST00000489042 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
FBXO18-214ENST00000489042 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
FBXO18-214ENST00000489042 ADAMTS12P58397 1594 aa23.4■■□□□ 1.34
FBXO18-214ENST00000489042 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
FBXO18-214ENST00000489042 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
FBXO18-214ENST00000489042 ERCC6L2Q5T890 1561 aa23.38■■□□□ 1.33
FBXO18-214ENST00000489042 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
FBXO18-214ENST00000489042 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
FBXO18-214ENST00000489042 NUP160Q12769 1436 aa23.21■■□□□ 1.31
FBXO18-214ENST00000489042 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
FBXO18-214ENST00000489042 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
FBXO18-214ENST00000489042 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
FBXO18-214ENST00000489042 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
FBXO18-214ENST00000489042 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
FBXO18-214ENST00000489042 KIF13AQ9H1H9 1805 aa22.98■■□□□ 1.27
FBXO18-214ENST00000489042 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms