RNA–Protein interactions for RNA: ENST00000489029.1

FAM53A-206, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-206ENST00000489029 NISCHQ9Y2I1 1504 aa42.44■■■■■ 4.38
FAM53A-206ENST00000489029 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
FAM53A-206ENST00000489029 ABCC9O60706 1549 aa37.24■■■■□ 3.55
FAM53A-206ENST00000489029 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
FAM53A-206ENST00000489029 NACADO15069 1562 aa35.76■■■■□ 3.31
FAM53A-206ENST00000489029 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
FAM53A-206ENST00000489029 DCAF8L2P0C7V8 631 aa35.41■■■■□ 3.26
FAM53A-206ENST00000489029 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
FAM53A-206ENST00000489029 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
FAM53A-206ENST00000489029 UNC13AQ9UPW8 1703 aa34.96■■■■□ 3.19
FAM53A-206ENST00000489029 BICRAQ9NZM4 1560 aa34.67■■■■□ 3.14
FAM53A-206ENST00000489029 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
FAM53A-206ENST00000489029 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
FAM53A-206ENST00000489029 SCRIBQ14160 1630 aa34.46■■■■□ 3.11
FAM53A-206ENST00000489029 DNAJC5BQ9UF47 199 aa34.34■■■■□ 3.09
FAM53A-206ENST00000489029 EIF4G1Q04637 1599 aaKnown RBP33.83■■■■□ 3.01
FAM53A-206ENST00000489029 CC2D2AQ9P2K1 1620 aa33.74■■■□□ 2.99
FAM53A-206ENST00000489029 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
FAM53A-206ENST00000489029 SMARCA4P51532 1647 aa33■■■□□ 2.87
FAM53A-206ENST00000489029 BAZ1AQ9NRL2 1556 aaPredicted RBP32.97■■■□□ 2.87
FAM53A-206ENST00000489029 NCAPD3P42695 1498 aa32.95■■■□□ 2.87
FAM53A-206ENST00000489029 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
FAM53A-206ENST00000489029 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
FAM53A-206ENST00000489029 HMGXB3Q12766 1538 aa32.81■■■□□ 2.84
FAM53A-206ENST00000489029 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
FAM53A-206ENST00000489029 MROH2BQ7Z745 1585 aa32.63■■■□□ 2.81
FAM53A-206ENST00000489029 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
FAM53A-206ENST00000489029 WIZO95785 1651 aa32.27■■■□□ 2.76
FAM53A-206ENST00000489029 ERCC6Q03468 1493 aa32.21■■■□□ 2.75
FAM53A-206ENST00000489029 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
FAM53A-206ENST00000489029 LAMC3Q9Y6N6 1575 aa32.17■■■□□ 2.74
FAM53A-206ENST00000489029 NESP48681 1621 aa32.11■■■□□ 2.73
FAM53A-206ENST00000489029 CUX2O14529 1486 aa32.05■■■□□ 2.72
FAM53A-206ENST00000489029 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
FAM53A-206ENST00000489029 PDS5BQ9NTI5 1447 aa31.95■■■□□ 2.71
FAM53A-206ENST00000489029 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
FAM53A-206ENST00000489029 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
FAM53A-206ENST00000489029 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
FAM53A-206ENST00000489029 CFTRP13569 1480 aa31.71■■■□□ 2.67
FAM53A-206ENST00000489029 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
FAM53A-206ENST00000489029 CEP164Q9UPV0 1460 aa31.59■■■□□ 2.65
FAM53A-206ENST00000489029 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
FAM53A-206ENST00000489029 CCDC88BA6NC98 1476 aa31.54■■■□□ 2.64
FAM53A-206ENST00000489029 PRDM2Q13029 1718 aa31.53■■■□□ 2.64
FAM53A-206ENST00000489029 WDR62O43379 1518 aa31.52■■■□□ 2.64
FAM53A-206ENST00000489029 DNAJC5Q9H3Z4 198 aa31.31■■■□□ 2.6
FAM53A-206ENST00000489029 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
FAM53A-206ENST00000489029 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
FAM53A-206ENST00000489029 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
FAM53A-206ENST00000489029 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
FAM53A-206ENST00000489029 DNMBPQ6XZF7 1577 aa31.01■■■□□ 2.56
FAM53A-206ENST00000489029 IFT140Q96RY7 1462 aa30.96■■■□□ 2.55
FAM53A-206ENST00000489029 POLA1P09884 1462 aaPredicted RBP30.75■■■□□ 2.51
FAM53A-206ENST00000489029 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
FAM53A-206ENST00000489029 TARBP1Q13395 1621 aaKnown RBP30.72■■■□□ 2.51
FAM53A-206ENST00000489029 EIF4G3O43432 1585 aaKnown RBP30.67■■■□□ 2.5
FAM53A-206ENST00000489029 CUX1P39880 1505 aa30.64■■■□□ 2.5
FAM53A-206ENST00000489029 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
FAM53A-206ENST00000489029 FGD5Q6ZNL6 1462 aa30.62■■■□□ 2.49
FAM53A-206ENST00000489029 SOGA1O94964 1423 aa30.6■■■□□ 2.49
FAM53A-206ENST00000489029 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
FAM53A-206ENST00000489029 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
FAM53A-206ENST00000489029 AQRO60306 1485 aaKnown RBP eCLIP30.51■■■□□ 2.48
FAM53A-206ENST00000489029 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
FAM53A-206ENST00000489029 BIVM-ERCC5R4GMW8 1640 aa30.39■■■□□ 2.46
FAM53A-206ENST00000489029 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.45
FAM53A-206ENST00000489029 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
FAM53A-206ENST00000489029 ABCA10Q8WWZ4 1543 aa30.36■■■□□ 2.45
FAM53A-206ENST00000489029 CHD1O14646 1710 aa30.33■■■□□ 2.45
FAM53A-206ENST00000489029 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
FAM53A-206ENST00000489029 MAGI1Q96QZ7 1491 aaPredicted RBP30.32■■■□□ 2.44
FAM53A-206ENST00000489029 SNAPC4Q5SXM2 1469 aa30.28■■■□□ 2.44
FAM53A-206ENST00000489029 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
FAM53A-206ENST00000489029 GAPVD1Q14C86 1478 aa30.26■■■□□ 2.44
FAM53A-206ENST00000489029 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
FAM53A-206ENST00000489029 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
FAM53A-206ENST00000489029 FBLN2P98095 1184 aa30.19■■■□□ 2.42
FAM53A-206ENST00000489029 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
FAM53A-206ENST00000489029 CHMP7Q8WUX9 453 aaPredicted RBP30.14■■■□□ 2.42
FAM53A-206ENST00000489029 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
FAM53A-206ENST00000489029 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
FAM53A-206ENST00000489029 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
FAM53A-206ENST00000489029 ARHGEF11O15085 1522 aa30.1■■■□□ 2.41
FAM53A-206ENST00000489029 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
FAM53A-206ENST00000489029 ERICH3Q5RHP9 1530 aa30.02■■■□□ 2.4
FAM53A-206ENST00000489029 CLASP1Q7Z460 1538 aa30.02■■■□□ 2.4
FAM53A-206ENST00000489029 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
FAM53A-206ENST00000489029 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
FAM53A-206ENST00000489029 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
FAM53A-206ENST00000489029 ARAP1Q96P48 1450 aa29.81■■■□□ 2.36
FAM53A-206ENST00000489029 NUP160Q12769 1436 aa29.81■■■□□ 2.36
FAM53A-206ENST00000489029 KIF27Q86VH2 1401 aa29.8■■■□□ 2.36
FAM53A-206ENST00000489029 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
FAM53A-206ENST00000489029 CYB5RLQ6IPT4 315 aa29.75■■■□□ 2.35
FAM53A-206ENST00000489029 CUL7Q14999 1698 aa29.72■■■□□ 2.35
FAM53A-206ENST00000489029 IGF1RP08069 1367 aa29.64■■■□□ 2.34
FAM53A-206ENST00000489029 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
FAM53A-206ENST00000489029 RUSC2Q8N2Y8 1516 aa29.55■■■□□ 2.32
FAM53A-206ENST00000489029 CARMIL1Q5VZK9 1371 aa29.49■■■□□ 2.31
FAM53A-206ENST00000489029 KIAA0586Q9BVV6 1533 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms