RNA–Protein interactions for RNA: ENST00000489021.6

NTRK1-204, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 4

Gene NTRK1, Length 570 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-204ENST00000489021 NISCHQ9Y2I1 1504 aa26.73■■□□□ 1.87
NTRK1-204ENST00000489021 ABCC9O60706 1549 aa24.09■■□□□ 1.45
NTRK1-204ENST00000489021 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
NTRK1-204ENST00000489021 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.26
NTRK1-204ENST00000489021 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
NTRK1-204ENST00000489021 NACADO15069 1562 aa22.74■■□□□ 1.23
NTRK1-204ENST00000489021 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
NTRK1-204ENST00000489021 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
NTRK1-204ENST00000489021 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
NTRK1-204ENST00000489021 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
NTRK1-204ENST00000489021 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
NTRK1-204ENST00000489021 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
NTRK1-204ENST00000489021 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
NTRK1-204ENST00000489021 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
NTRK1-204ENST00000489021 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
NTRK1-204ENST00000489021 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
NTRK1-204ENST00000489021 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
NTRK1-204ENST00000489021 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
NTRK1-204ENST00000489021 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
NTRK1-204ENST00000489021 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
NTRK1-204ENST00000489021 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
NTRK1-204ENST00000489021 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
NTRK1-204ENST00000489021 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
NTRK1-204ENST00000489021 CUX2O14529 1486 aa20.82■□□□□ 0.92
NTRK1-204ENST00000489021 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
NTRK1-204ENST00000489021 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
NTRK1-204ENST00000489021 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
NTRK1-204ENST00000489021 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
NTRK1-204ENST00000489021 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
NTRK1-204ENST00000489021 NESP48681 1621 aa20.67■□□□□ 0.9
NTRK1-204ENST00000489021 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
NTRK1-204ENST00000489021 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
NTRK1-204ENST00000489021 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
NTRK1-204ENST00000489021 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
NTRK1-204ENST00000489021 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
NTRK1-204ENST00000489021 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
NTRK1-204ENST00000489021 WIZO95785 1651 aa20.29■□□□□ 0.84
NTRK1-204ENST00000489021 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
NTRK1-204ENST00000489021 WDR62O43379 1518 aa20.18■□□□□ 0.82
NTRK1-204ENST00000489021 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
NTRK1-204ENST00000489021 CFTRP13569 1480 aa20.12■□□□□ 0.81
NTRK1-204ENST00000489021 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
NTRK1-204ENST00000489021 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
NTRK1-204ENST00000489021 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
NTRK1-204ENST00000489021 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
NTRK1-204ENST00000489021 URB2Q14146 1524 aaKnown RBP19.95■□□□□ 0.78
NTRK1-204ENST00000489021 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
NTRK1-204ENST00000489021 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
NTRK1-204ENST00000489021 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
NTRK1-204ENST00000489021 IFT140Q96RY7 1462 aa19.75■□□□□ 0.75
NTRK1-204ENST00000489021 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
NTRK1-204ENST00000489021 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
NTRK1-204ENST00000489021 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
NTRK1-204ENST00000489021 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
NTRK1-204ENST00000489021 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
NTRK1-204ENST00000489021 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
NTRK1-204ENST00000489021 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
NTRK1-204ENST00000489021 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
NTRK1-204ENST00000489021 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
NTRK1-204ENST00000489021 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
NTRK1-204ENST00000489021 ARHGEF11O15085 1522 aa19.52■□□□□ 0.72
NTRK1-204ENST00000489021 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
NTRK1-204ENST00000489021 SOGA1O94964 1423 aa19.44■□□□□ 0.7
NTRK1-204ENST00000489021 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
NTRK1-204ENST00000489021 FBLN2P98095 1184 aa19.43■□□□□ 0.7
NTRK1-204ENST00000489021 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
NTRK1-204ENST00000489021 CHD1O14646 1710 aa19.41■□□□□ 0.7
NTRK1-204ENST00000489021 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
NTRK1-204ENST00000489021 FGD5Q6ZNL6 1462 aa19.36■□□□□ 0.69
NTRK1-204ENST00000489021 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
NTRK1-204ENST00000489021 CUX1P39880 1505 aa19.34■□□□□ 0.69
NTRK1-204ENST00000489021 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
NTRK1-204ENST00000489021 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
NTRK1-204ENST00000489021 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
NTRK1-204ENST00000489021 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
NTRK1-204ENST00000489021 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
NTRK1-204ENST00000489021 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
NTRK1-204ENST00000489021 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
NTRK1-204ENST00000489021 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
NTRK1-204ENST00000489021 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
NTRK1-204ENST00000489021 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
NTRK1-204ENST00000489021 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
NTRK1-204ENST00000489021 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
NTRK1-204ENST00000489021 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
NTRK1-204ENST00000489021 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
NTRK1-204ENST00000489021 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.65
NTRK1-204ENST00000489021 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
NTRK1-204ENST00000489021 TOP2BQ02880 1626 aa19■□□□□ 0.63
NTRK1-204ENST00000489021 NUP160Q12769 1436 aa18.98■□□□□ 0.63
NTRK1-204ENST00000489021 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
NTRK1-204ENST00000489021 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
NTRK1-204ENST00000489021 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
NTRK1-204ENST00000489021 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
NTRK1-204ENST00000489021 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
NTRK1-204ENST00000489021 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
NTRK1-204ENST00000489021 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
NTRK1-204ENST00000489021 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
NTRK1-204ENST00000489021 PRG4Q92954 1404 aaPredicted RBP18.79■□□□□ 0.6
NTRK1-204ENST00000489021 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
NTRK1-204ENST00000489021 IGF1RP08069 1367 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms