RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
CYTH3-209ENST00000488964 CCDC180Q9P1Z9 1646 aa32.55■■■□□ 2.8
CYTH3-209ENST00000488964 ABCC9O60706 1549 aa31.83■■■□□ 2.69
CYTH3-209ENST00000488964 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
CYTH3-209ENST00000488964 NACADO15069 1562 aa30.62■■■□□ 2.49
CYTH3-209ENST00000488964 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
CYTH3-209ENST00000488964 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
CYTH3-209ENST00000488964 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
CYTH3-209ENST00000488964 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
CYTH3-209ENST00000488964 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
CYTH3-209ENST00000488964 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
CYTH3-209ENST00000488964 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
CYTH3-209ENST00000488964 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
CYTH3-209ENST00000488964 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
CYTH3-209ENST00000488964 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
CYTH3-209ENST00000488964 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
CYTH3-209ENST00000488964 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
CYTH3-209ENST00000488964 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
CYTH3-209ENST00000488964 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
CYTH3-209ENST00000488964 SMARCA4P51532 1647 aa28.34■■■□□ 2.13
CYTH3-209ENST00000488964 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
CYTH3-209ENST00000488964 NCAPD3P42695 1498 aa28.2■■■□□ 2.1
CYTH3-209ENST00000488964 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
CYTH3-209ENST00000488964 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
CYTH3-209ENST00000488964 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
CYTH3-209ENST00000488964 PEG3Q9GZU2 1588 aa28.06■■■□□ 2.08
CYTH3-209ENST00000488964 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
CYTH3-209ENST00000488964 WIZO95785 1651 aa27.78■■■□□ 2.04
CYTH3-209ENST00000488964 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
CYTH3-209ENST00000488964 ERCC6Q03468 1493 aa27.57■■■□□ 2
CYTH3-209ENST00000488964 TOP2AP11388 1531 aaKnown RBP27.56■■■□□ 2
CYTH3-209ENST00000488964 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
CYTH3-209ENST00000488964 NESP48681 1621 aa27.47■■□□□ 1.99
CYTH3-209ENST00000488964 CADPSQ9ULU8 1353 aa27.39■■□□□ 1.98
CYTH3-209ENST00000488964 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
CYTH3-209ENST00000488964 CUX2O14529 1486 aa27.27■■□□□ 1.96
CYTH3-209ENST00000488964 CFTRP13569 1480 aa27.19■■□□□ 1.94
CYTH3-209ENST00000488964 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
CYTH3-209ENST00000488964 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
CYTH3-209ENST00000488964 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
CYTH3-209ENST00000488964 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
CYTH3-209ENST00000488964 FANCD2Q9BXW9 1451 aa27.08■■□□□ 1.93
CYTH3-209ENST00000488964 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
CYTH3-209ENST00000488964 PRDM2Q13029 1718 aa27.05■■□□□ 1.92
CYTH3-209ENST00000488964 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
CYTH3-209ENST00000488964 WDR62O43379 1518 aa26.94■■□□□ 1.9
CYTH3-209ENST00000488964 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
CYTH3-209ENST00000488964 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
CYTH3-209ENST00000488964 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
CYTH3-209ENST00000488964 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
CYTH3-209ENST00000488964 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
CYTH3-209ENST00000488964 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
CYTH3-209ENST00000488964 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
CYTH3-209ENST00000488964 CUX1P39880 1505 aa26.36■■□□□ 1.81
CYTH3-209ENST00000488964 FGD5Q6ZNL6 1462 aa26.32■■□□□ 1.8
CYTH3-209ENST00000488964 SOGA1O94964 1423 aa26.31■■□□□ 1.8
CYTH3-209ENST00000488964 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
CYTH3-209ENST00000488964 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
CYTH3-209ENST00000488964 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
CYTH3-209ENST00000488964 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
CYTH3-209ENST00000488964 WDR97A6NE52 1622 aa26.24■■□□□ 1.79
CYTH3-209ENST00000488964 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
CYTH3-209ENST00000488964 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
CYTH3-209ENST00000488964 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.78
CYTH3-209ENST00000488964 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
CYTH3-209ENST00000488964 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
CYTH3-209ENST00000488964 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
CYTH3-209ENST00000488964 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
CYTH3-209ENST00000488964 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
CYTH3-209ENST00000488964 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
CYTH3-209ENST00000488964 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
CYTH3-209ENST00000488964 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
CYTH3-209ENST00000488964 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
CYTH3-209ENST00000488964 FBLN2P98095 1184 aa25.97■■□□□ 1.75
CYTH3-209ENST00000488964 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
CYTH3-209ENST00000488964 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
CYTH3-209ENST00000488964 CHD1O14646 1710 aa25.94■■□□□ 1.74
CYTH3-209ENST00000488964 CHMP7Q8WUX9 453 aaPredicted RBP25.9■■□□□ 1.74
CYTH3-209ENST00000488964 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
CYTH3-209ENST00000488964 ERICH3Q5RHP9 1530 aa25.79■■□□□ 1.72
CYTH3-209ENST00000488964 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
CYTH3-209ENST00000488964 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
CYTH3-209ENST00000488964 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
CYTH3-209ENST00000488964 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
CYTH3-209ENST00000488964 ARHGEF11O15085 1522 aa25.64■■□□□ 1.7
CYTH3-209ENST00000488964 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
CYTH3-209ENST00000488964 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
CYTH3-209ENST00000488964 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
CYTH3-209ENST00000488964 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
CYTH3-209ENST00000488964 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
CYTH3-209ENST00000488964 CUL7Q14999 1698 aa25.58■■□□□ 1.69
CYTH3-209ENST00000488964 NUP160Q12769 1436 aa25.54■■□□□ 1.68
CYTH3-209ENST00000488964 IGF1RP08069 1367 aa25.53■■□□□ 1.68
CYTH3-209ENST00000488964 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
CYTH3-209ENST00000488964 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
CYTH3-209ENST00000488964 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
CYTH3-209ENST00000488964 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
CYTH3-209ENST00000488964 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
CYTH3-209ENST00000488964 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
CYTH3-209ENST00000488964 KIAA0586Q9BVV6 1533 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms