RNA–Protein interactions for RNA: ENST00000488874.1

FAM83F-203, Transcript of family with sequence similarity 83 member F, humanhuman

TSL 1 (best)

Gene FAM83F, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM83F-203ENST00000488874 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
FAM83F-203ENST00000488874 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
FAM83F-203ENST00000488874 ABCC9O60706 1549 aa27.31■■□□□ 1.96
FAM83F-203ENST00000488874 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
FAM83F-203ENST00000488874 NACADO15069 1562 aa26.24■■□□□ 1.79
FAM83F-203ENST00000488874 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
FAM83F-203ENST00000488874 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
FAM83F-203ENST00000488874 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
FAM83F-203ENST00000488874 DCAF1Q9Y4B6 1507 aa25.99■■□□□ 1.75
FAM83F-203ENST00000488874 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
FAM83F-203ENST00000488874 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
FAM83F-203ENST00000488874 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
FAM83F-203ENST00000488874 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
FAM83F-203ENST00000488874 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
FAM83F-203ENST00000488874 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
FAM83F-203ENST00000488874 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
FAM83F-203ENST00000488874 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
FAM83F-203ENST00000488874 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
FAM83F-203ENST00000488874 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
FAM83F-203ENST00000488874 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
FAM83F-203ENST00000488874 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
FAM83F-203ENST00000488874 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
FAM83F-203ENST00000488874 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
FAM83F-203ENST00000488874 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
FAM83F-203ENST00000488874 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
FAM83F-203ENST00000488874 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
FAM83F-203ENST00000488874 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
FAM83F-203ENST00000488874 WIZO95785 1651 aa23.98■■□□□ 1.43
FAM83F-203ENST00000488874 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
FAM83F-203ENST00000488874 NESP48681 1621 aa23.68■■□□□ 1.38
FAM83F-203ENST00000488874 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
FAM83F-203ENST00000488874 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
FAM83F-203ENST00000488874 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
FAM83F-203ENST00000488874 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
FAM83F-203ENST00000488874 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
FAM83F-203ENST00000488874 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
FAM83F-203ENST00000488874 CFTRP13569 1480 aa23.37■■□□□ 1.33
FAM83F-203ENST00000488874 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
FAM83F-203ENST00000488874 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
FAM83F-203ENST00000488874 CUX2O14529 1486 aa23.28■■□□□ 1.32
FAM83F-203ENST00000488874 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
FAM83F-203ENST00000488874 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
FAM83F-203ENST00000488874 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
FAM83F-203ENST00000488874 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
FAM83F-203ENST00000488874 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
FAM83F-203ENST00000488874 WDR62O43379 1518 aa23.13■■□□□ 1.29
FAM83F-203ENST00000488874 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
FAM83F-203ENST00000488874 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
FAM83F-203ENST00000488874 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
FAM83F-203ENST00000488874 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
FAM83F-203ENST00000488874 CUX1P39880 1505 aa22.72■■□□□ 1.23
FAM83F-203ENST00000488874 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
FAM83F-203ENST00000488874 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
FAM83F-203ENST00000488874 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
FAM83F-203ENST00000488874 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
FAM83F-203ENST00000488874 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
FAM83F-203ENST00000488874 DNAJC5Q9H3Z4 198 aa22.6■■□□□ 1.21
FAM83F-203ENST00000488874 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
FAM83F-203ENST00000488874 EIF4G3O43432 1585 aaKnown RBP22.56■■□□□ 1.2
FAM83F-203ENST00000488874 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
FAM83F-203ENST00000488874 SOGA1O94964 1423 aa22.53■■□□□ 1.2
FAM83F-203ENST00000488874 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
FAM83F-203ENST00000488874 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
FAM83F-203ENST00000488874 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
FAM83F-203ENST00000488874 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
FAM83F-203ENST00000488874 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
FAM83F-203ENST00000488874 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
FAM83F-203ENST00000488874 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
FAM83F-203ENST00000488874 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
FAM83F-203ENST00000488874 PBRM1Q86U86 1689 aa22.31■■□□□ 1.16
FAM83F-203ENST00000488874 CHD1O14646 1710 aa22.31■■□□□ 1.16
FAM83F-203ENST00000488874 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
FAM83F-203ENST00000488874 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
FAM83F-203ENST00000488874 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
FAM83F-203ENST00000488874 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
FAM83F-203ENST00000488874 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
FAM83F-203ENST00000488874 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
FAM83F-203ENST00000488874 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
FAM83F-203ENST00000488874 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
FAM83F-203ENST00000488874 FBLN2P98095 1184 aa22.09■■□□□ 1.13
FAM83F-203ENST00000488874 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
FAM83F-203ENST00000488874 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
FAM83F-203ENST00000488874 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
FAM83F-203ENST00000488874 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.11
FAM83F-203ENST00000488874 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.11
FAM83F-203ENST00000488874 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.11
FAM83F-203ENST00000488874 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
FAM83F-203ENST00000488874 KIF27Q86VH2 1401 aa21.99■■□□□ 1.11
FAM83F-203ENST00000488874 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
FAM83F-203ENST00000488874 IGF1RP08069 1367 aa21.98■■□□□ 1.11
FAM83F-203ENST00000488874 CEP170Q5SW79 1584 aa21.95■■□□□ 1.11
FAM83F-203ENST00000488874 NUP160Q12769 1436 aa21.95■■□□□ 1.1
FAM83F-203ENST00000488874 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
FAM83F-203ENST00000488874 CUL7Q14999 1698 aa21.91■■□□□ 1.1
FAM83F-203ENST00000488874 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
FAM83F-203ENST00000488874 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
FAM83F-203ENST00000488874 ARAP1Q96P48 1450 aa21.83■■□□□ 1.08
FAM83F-203ENST00000488874 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
FAM83F-203ENST00000488874 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
FAM83F-203ENST00000488874 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms