RNA–Protein interactions for RNA: ENST00000488701.1

C1S-213, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-213ENST00000488701 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
C1S-213ENST00000488701 CCDC180Q9P1Z9 1646 aa36.76■■■■□ 3.48
C1S-213ENST00000488701 ABCC9O60706 1549 aa36.38■■■■□ 3.41
C1S-213ENST00000488701 RB1CC1Q8TDY2 1594 aa34.77■■■■□ 3.16
C1S-213ENST00000488701 NACADO15069 1562 aa34.62■■■■□ 3.13
C1S-213ENST00000488701 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
C1S-213ENST00000488701 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
C1S-213ENST00000488701 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
C1S-213ENST00000488701 UNC13AQ9UPW8 1703 aa34.08■■■■□ 3.05
C1S-213ENST00000488701 DCAF1Q9Y4B6 1507 aa33.97■■■■□ 3.03
C1S-213ENST00000488701 PABPN1Q86U42 306 aaKnown RBP eCLIP33.89■■■■□ 3.02
C1S-213ENST00000488701 BICRAQ9NZM4 1560 aa33.8■■■■□ 3
C1S-213ENST00000488701 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
C1S-213ENST00000488701 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
C1S-213ENST00000488701 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
C1S-213ENST00000488701 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
C1S-213ENST00000488701 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
C1S-213ENST00000488701 CECR2Q9BXF3 1484 aa32.71■■■□□ 2.83
C1S-213ENST00000488701 SMARCA4P51532 1647 aa32.02■■■□□ 2.72
C1S-213ENST00000488701 NCAPD3P42695 1498 aa31.94■■■□□ 2.7
C1S-213ENST00000488701 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
C1S-213ENST00000488701 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
C1S-213ENST00000488701 SMARCA2P51531 1590 aa31.84■■■□□ 2.69
C1S-213ENST00000488701 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
C1S-213ENST00000488701 MROH2BQ7Z745 1585 aa31.7■■■□□ 2.67
C1S-213ENST00000488701 PEG3Q9GZU2 1588 aa31.69■■■□□ 2.66
C1S-213ENST00000488701 BAZ1BQ9UIG0 1483 aaKnown RBP31.63■■■□□ 2.65
C1S-213ENST00000488701 NESP48681 1621 aa31.38■■■□□ 2.61
C1S-213ENST00000488701 WIZO95785 1651 aa31.35■■■□□ 2.61
C1S-213ENST00000488701 ERCC6Q03468 1493 aa31.34■■■□□ 2.61
C1S-213ENST00000488701 LAMC3Q9Y6N6 1575 aa31.18■■■□□ 2.58
C1S-213ENST00000488701 CUX2O14529 1486 aa31.18■■■□□ 2.58
C1S-213ENST00000488701 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
C1S-213ENST00000488701 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.56
C1S-213ENST00000488701 KIF21AQ7Z4S6 1674 aa31.01■■■□□ 2.55
C1S-213ENST00000488701 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
C1S-213ENST00000488701 TOP2AP11388 1531 aaKnown RBP30.97■■■□□ 2.55
C1S-213ENST00000488701 PDS5BQ9NTI5 1447 aa30.94■■■□□ 2.54
C1S-213ENST00000488701 CFTRP13569 1480 aa30.73■■■□□ 2.51
C1S-213ENST00000488701 MRC2Q9UBG0 1479 aa30.7■■■□□ 2.51
C1S-213ENST00000488701 DNAJC5Q9H3Z4 198 aa30.69■■■□□ 2.5
C1S-213ENST00000488701 FANCD2Q9BXW9 1451 aa30.65■■■□□ 2.5
C1S-213ENST00000488701 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
C1S-213ENST00000488701 WDR62O43379 1518 aa30.65■■■□□ 2.5
C1S-213ENST00000488701 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
C1S-213ENST00000488701 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
C1S-213ENST00000488701 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
C1S-213ENST00000488701 TOPBP1Q92547 1522 aa30.13■■■□□ 2.41
C1S-213ENST00000488701 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
C1S-213ENST00000488701 ABCC8Q09428 1581 aa30.03■■■□□ 2.4
C1S-213ENST00000488701 IFT140Q96RY7 1462 aa30.02■■■□□ 2.4
C1S-213ENST00000488701 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
C1S-213ENST00000488701 ZNF608Q9ULD9 1512 aaPredicted RBP29.97■■■□□ 2.39
C1S-213ENST00000488701 TARBP1Q13395 1621 aaKnown RBP29.86■■■□□ 2.37
C1S-213ENST00000488701 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
C1S-213ENST00000488701 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
C1S-213ENST00000488701 CUX1P39880 1505 aa29.76■■■□□ 2.36
C1S-213ENST00000488701 OSCARQ8IYS5 282 aa29.74■■■□□ 2.35
C1S-213ENST00000488701 RAD54L2Q9Y4B4 1467 aa29.73■■■□□ 2.35
C1S-213ENST00000488701 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.35
C1S-213ENST00000488701 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
C1S-213ENST00000488701 SOGA1O94964 1423 aa29.67■■■□□ 2.34
C1S-213ENST00000488701 TDRD9Q8NDG6 1382 aaKnown RBP29.57■■■□□ 2.32
C1S-213ENST00000488701 CHD1O14646 1710 aa29.57■■■□□ 2.32
C1S-213ENST00000488701 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
C1S-213ENST00000488701 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
C1S-213ENST00000488701 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
C1S-213ENST00000488701 RIMBP3CA6NJZ7 1639 aa29.44■■■□□ 2.3
C1S-213ENST00000488701 RIMBP3BA6NNM3 1639 aa29.44■■■□□ 2.3
C1S-213ENST00000488701 RIMBP3Q9UFD9 1639 aa29.44■■■□□ 2.3
C1S-213ENST00000488701 BIVM-ERCC5R4GMW8 1640 aa29.4■■■□□ 2.3
C1S-213ENST00000488701 GRIN2BQ13224 1484 aa29.39■■■□□ 2.3
C1S-213ENST00000488701 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
C1S-213ENST00000488701 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
C1S-213ENST00000488701 FBLN2P98095 1184 aa29.38■■■□□ 2.29
C1S-213ENST00000488701 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
C1S-213ENST00000488701 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
C1S-213ENST00000488701 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
C1S-213ENST00000488701 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
C1S-213ENST00000488701 ABCA5Q8WWZ7 1642 aa29.36■■■□□ 2.29
C1S-213ENST00000488701 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
C1S-213ENST00000488701 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
C1S-213ENST00000488701 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
C1S-213ENST00000488701 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
C1S-213ENST00000488701 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
C1S-213ENST00000488701 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
C1S-213ENST00000488701 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
C1S-213ENST00000488701 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
C1S-213ENST00000488701 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
C1S-213ENST00000488701 ERICH3Q5RHP9 1530 aa29.02■■■□□ 2.24
C1S-213ENST00000488701 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
C1S-213ENST00000488701 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
C1S-213ENST00000488701 NUP160Q12769 1436 aa28.93■■■□□ 2.22
C1S-213ENST00000488701 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
C1S-213ENST00000488701 SHROOM2Q13796 1616 aa28.79■■■□□ 2.2
C1S-213ENST00000488701 KIF27Q86VH2 1401 aa28.76■■■□□ 2.19
C1S-213ENST00000488701 IGF1RP08069 1367 aa28.71■■■□□ 2.19
C1S-213ENST00000488701 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
C1S-213ENST00000488701 CUL7Q14999 1698 aa28.69■■■□□ 2.18
C1S-213ENST00000488701 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms