RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
SH2D3C-212ENST00000488685 CCDC180Q9P1Z9 1646 aa29.99■■■□□ 2.39
SH2D3C-212ENST00000488685 ABCC9O60706 1549 aa29.46■■■□□ 2.31
SH2D3C-212ENST00000488685 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
SH2D3C-212ENST00000488685 NACADO15069 1562 aa28.25■■■□□ 2.11
SH2D3C-212ENST00000488685 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
SH2D3C-212ENST00000488685 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
SH2D3C-212ENST00000488685 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
SH2D3C-212ENST00000488685 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
SH2D3C-212ENST00000488685 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.02
SH2D3C-212ENST00000488685 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
SH2D3C-212ENST00000488685 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
SH2D3C-212ENST00000488685 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
SH2D3C-212ENST00000488685 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
SH2D3C-212ENST00000488685 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
SH2D3C-212ENST00000488685 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
SH2D3C-212ENST00000488685 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
SH2D3C-212ENST00000488685 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
SH2D3C-212ENST00000488685 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
SH2D3C-212ENST00000488685 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
SH2D3C-212ENST00000488685 NCAPD3P42695 1498 aa26.09■■□□□ 1.77
SH2D3C-212ENST00000488685 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
SH2D3C-212ENST00000488685 SMARCA2P51531 1590 aa26■■□□□ 1.75
SH2D3C-212ENST00000488685 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
SH2D3C-212ENST00000488685 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
SH2D3C-212ENST00000488685 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
SH2D3C-212ENST00000488685 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
SH2D3C-212ENST00000488685 WIZO95785 1651 aa25.64■■□□□ 1.7
SH2D3C-212ENST00000488685 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
SH2D3C-212ENST00000488685 NESP48681 1621 aa25.45■■□□□ 1.67
SH2D3C-212ENST00000488685 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
SH2D3C-212ENST00000488685 ERCC6Q03468 1493 aa25.39■■□□□ 1.65
SH2D3C-212ENST00000488685 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
SH2D3C-212ENST00000488685 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
SH2D3C-212ENST00000488685 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
SH2D3C-212ENST00000488685 CUX2O14529 1486 aa25.21■■□□□ 1.63
SH2D3C-212ENST00000488685 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
SH2D3C-212ENST00000488685 CFTRP13569 1480 aa25.13■■□□□ 1.61
SH2D3C-212ENST00000488685 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
SH2D3C-212ENST00000488685 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
SH2D3C-212ENST00000488685 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
SH2D3C-212ENST00000488685 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
SH2D3C-212ENST00000488685 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
SH2D3C-212ENST00000488685 WDR62O43379 1518 aa24.89■■□□□ 1.57
SH2D3C-212ENST00000488685 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
SH2D3C-212ENST00000488685 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
SH2D3C-212ENST00000488685 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
SH2D3C-212ENST00000488685 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
SH2D3C-212ENST00000488685 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
SH2D3C-212ENST00000488685 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
SH2D3C-212ENST00000488685 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
SH2D3C-212ENST00000488685 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
SH2D3C-212ENST00000488685 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
SH2D3C-212ENST00000488685 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
SH2D3C-212ENST00000488685 CUX1P39880 1505 aa24.34■■□□□ 1.49
SH2D3C-212ENST00000488685 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
SH2D3C-212ENST00000488685 SOGA1O94964 1423 aa24.28■■□□□ 1.48
SH2D3C-212ENST00000488685 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
SH2D3C-212ENST00000488685 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
SH2D3C-212ENST00000488685 EIF4G3O43432 1585 aaKnown RBP24.23■■□□□ 1.47
SH2D3C-212ENST00000488685 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
SH2D3C-212ENST00000488685 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
SH2D3C-212ENST00000488685 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
SH2D3C-212ENST00000488685 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
SH2D3C-212ENST00000488685 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
SH2D3C-212ENST00000488685 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
SH2D3C-212ENST00000488685 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
SH2D3C-212ENST00000488685 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
SH2D3C-212ENST00000488685 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
SH2D3C-212ENST00000488685 GRIN2BQ13224 1484 aa24■■□□□ 1.43
SH2D3C-212ENST00000488685 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
SH2D3C-212ENST00000488685 CHD1O14646 1710 aa23.96■■□□□ 1.43
SH2D3C-212ENST00000488685 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
SH2D3C-212ENST00000488685 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
SH2D3C-212ENST00000488685 FBLN2P98095 1184 aa23.94■■□□□ 1.42
SH2D3C-212ENST00000488685 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
SH2D3C-212ENST00000488685 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
SH2D3C-212ENST00000488685 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
SH2D3C-212ENST00000488685 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
SH2D3C-212ENST00000488685 ERICH3Q5RHP9 1530 aa23.76■■□□□ 1.39
SH2D3C-212ENST00000488685 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
SH2D3C-212ENST00000488685 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
SH2D3C-212ENST00000488685 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
SH2D3C-212ENST00000488685 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
SH2D3C-212ENST00000488685 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
SH2D3C-212ENST00000488685 CLASP1Q7Z460 1538 aa23.72■■□□□ 1.39
SH2D3C-212ENST00000488685 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
SH2D3C-212ENST00000488685 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
SH2D3C-212ENST00000488685 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
SH2D3C-212ENST00000488685 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
SH2D3C-212ENST00000488685 IGF1RP08069 1367 aa23.6■■□□□ 1.37
SH2D3C-212ENST00000488685 NUP160Q12769 1436 aa23.59■■□□□ 1.37
SH2D3C-212ENST00000488685 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
SH2D3C-212ENST00000488685 CEP170Q5SW79 1584 aa23.56■■□□□ 1.36
SH2D3C-212ENST00000488685 ARAP1Q96P48 1450 aa23.53■■□□□ 1.36
SH2D3C-212ENST00000488685 CUL7Q14999 1698 aa23.49■■□□□ 1.35
SH2D3C-212ENST00000488685 CARMIL1Q5VZK9 1371 aa23.44■■□□□ 1.34
SH2D3C-212ENST00000488685 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
SH2D3C-212ENST00000488685 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
SH2D3C-212ENST00000488685 JPH4Q96JJ6 628 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms