RNA–Protein interactions for RNA: ENST00000488657.3

SH2D6-209, Transcript of SH2 domain containing 6, humanhuman

TSL 4

Gene SH2D6, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D6-209ENST00000488657 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
SH2D6-209ENST00000488657 CCDC180Q9P1Z9 1646 aa33.58■■■□□ 2.97
SH2D6-209ENST00000488657 ABCC9O60706 1549 aa32.86■■■□□ 2.85
SH2D6-209ENST00000488657 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.66
SH2D6-209ENST00000488657 NACADO15069 1562 aa31.56■■■□□ 2.64
SH2D6-209ENST00000488657 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
SH2D6-209ENST00000488657 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
SH2D6-209ENST00000488657 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
SH2D6-209ENST00000488657 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.58
SH2D6-209ENST00000488657 UNC13AQ9UPW8 1703 aa30.95■■■□□ 2.55
SH2D6-209ENST00000488657 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
SH2D6-209ENST00000488657 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
SH2D6-209ENST00000488657 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
SH2D6-209ENST00000488657 SHROOM4Q9ULL8 1493 aa30.37■■■□□ 2.45
SH2D6-209ENST00000488657 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
SH2D6-209ENST00000488657 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
SH2D6-209ENST00000488657 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
SH2D6-209ENST00000488657 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
SH2D6-209ENST00000488657 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
SH2D6-209ENST00000488657 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
SH2D6-209ENST00000488657 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
SH2D6-209ENST00000488657 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
SH2D6-209ENST00000488657 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
SH2D6-209ENST00000488657 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
SH2D6-209ENST00000488657 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
SH2D6-209ENST00000488657 MROH2BQ7Z745 1585 aa28.93■■■□□ 2.22
SH2D6-209ENST00000488657 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
SH2D6-209ENST00000488657 WIZO95785 1651 aa28.66■■■□□ 2.18
SH2D6-209ENST00000488657 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
SH2D6-209ENST00000488657 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.14
SH2D6-209ENST00000488657 NESP48681 1621 aa28.37■■■□□ 2.13
SH2D6-209ENST00000488657 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
SH2D6-209ENST00000488657 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
SH2D6-209ENST00000488657 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
SH2D6-209ENST00000488657 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
SH2D6-209ENST00000488657 CUX2O14529 1486 aa28.14■■■□□ 2.09
SH2D6-209ENST00000488657 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
SH2D6-209ENST00000488657 THOC2Q8NI27 1593 aaKnown RBP28.04■■■□□ 2.08
SH2D6-209ENST00000488657 CFTRP13569 1480 aa28.02■■■□□ 2.08
SH2D6-209ENST00000488657 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
SH2D6-209ENST00000488657 PRDM2Q13029 1718 aa27.95■■■□□ 2.06
SH2D6-209ENST00000488657 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
SH2D6-209ENST00000488657 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
SH2D6-209ENST00000488657 MRC2Q9UBG0 1479 aa27.88■■■□□ 2.05
SH2D6-209ENST00000488657 WDR62O43379 1518 aa27.8■■■□□ 2.04
SH2D6-209ENST00000488657 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
SH2D6-209ENST00000488657 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
SH2D6-209ENST00000488657 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
SH2D6-209ENST00000488657 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
SH2D6-209ENST00000488657 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
SH2D6-209ENST00000488657 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
SH2D6-209ENST00000488657 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
SH2D6-209ENST00000488657 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
SH2D6-209ENST00000488657 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
SH2D6-209ENST00000488657 CUX1P39880 1505 aa27.16■■□□□ 1.94
SH2D6-209ENST00000488657 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
SH2D6-209ENST00000488657 EIF4G3O43432 1585 aaKnown RBP27.1■■□□□ 1.93
SH2D6-209ENST00000488657 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
SH2D6-209ENST00000488657 SOGA1O94964 1423 aa27.07■■□□□ 1.92
SH2D6-209ENST00000488657 RAD54L2Q9Y4B4 1467 aa27.04■■□□□ 1.92
SH2D6-209ENST00000488657 WDR97A6NE52 1622 aa27.02■■□□□ 1.92
SH2D6-209ENST00000488657 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.91
SH2D6-209ENST00000488657 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
SH2D6-209ENST00000488657 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
SH2D6-209ENST00000488657 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
SH2D6-209ENST00000488657 OSCARQ8IYS5 282 aa26.92■■□□□ 1.9
SH2D6-209ENST00000488657 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
SH2D6-209ENST00000488657 SYNJ1O43426 1573 aa26.89■■□□□ 1.9
SH2D6-209ENST00000488657 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
SH2D6-209ENST00000488657 CHD1O14646 1710 aa26.82■■□□□ 1.88
SH2D6-209ENST00000488657 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
SH2D6-209ENST00000488657 GRIN2BQ13224 1484 aa26.8■■□□□ 1.88
SH2D6-209ENST00000488657 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
SH2D6-209ENST00000488657 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
SH2D6-209ENST00000488657 SNAPC4Q5SXM2 1469 aa26.75■■□□□ 1.87
SH2D6-209ENST00000488657 MAGI1Q96QZ7 1491 aaPredicted RBP26.75■■□□□ 1.87
SH2D6-209ENST00000488657 FBLN2P98095 1184 aa26.7■■□□□ 1.86
SH2D6-209ENST00000488657 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
SH2D6-209ENST00000488657 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
SH2D6-209ENST00000488657 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
SH2D6-209ENST00000488657 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
SH2D6-209ENST00000488657 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
SH2D6-209ENST00000488657 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
SH2D6-209ENST00000488657 ADAMTS12P58397 1594 aa26.52■■□□□ 1.84
SH2D6-209ENST00000488657 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
SH2D6-209ENST00000488657 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
SH2D6-209ENST00000488657 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
SH2D6-209ENST00000488657 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
SH2D6-209ENST00000488657 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
SH2D6-209ENST00000488657 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
SH2D6-209ENST00000488657 CUL7Q14999 1698 aa26.33■■□□□ 1.81
SH2D6-209ENST00000488657 NUP160Q12769 1436 aa26.31■■□□□ 1.8
SH2D6-209ENST00000488657 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
SH2D6-209ENST00000488657 IGF1RP08069 1367 aa26.28■■□□□ 1.8
SH2D6-209ENST00000488657 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
SH2D6-209ENST00000488657 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
SH2D6-209ENST00000488657 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
SH2D6-209ENST00000488657 CARMIL1Q5VZK9 1371 aa26.14■■□□□ 1.78
SH2D6-209ENST00000488657 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
SH2D6-209ENST00000488657 ERCC6L2Q5T890 1561 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms