RNA–Protein interactions for RNA: ENST00000488648.5

SKIV2L-212, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 720 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-212ENST00000488648 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
SKIV2L-212ENST00000488648 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
SKIV2L-212ENST00000488648 ABCC9O60706 1549 aa24.91■■□□□ 1.58
SKIV2L-212ENST00000488648 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
SKIV2L-212ENST00000488648 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
SKIV2L-212ENST00000488648 NACADO15069 1562 aa24.29■■□□□ 1.48
SKIV2L-212ENST00000488648 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
SKIV2L-212ENST00000488648 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
SKIV2L-212ENST00000488648 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
SKIV2L-212ENST00000488648 UNC13AQ9UPW8 1703 aa23.71■■□□□ 1.39
SKIV2L-212ENST00000488648 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
SKIV2L-212ENST00000488648 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
SKIV2L-212ENST00000488648 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
SKIV2L-212ENST00000488648 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
SKIV2L-212ENST00000488648 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
SKIV2L-212ENST00000488648 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
SKIV2L-212ENST00000488648 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
SKIV2L-212ENST00000488648 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
SKIV2L-212ENST00000488648 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
SKIV2L-212ENST00000488648 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
SKIV2L-212ENST00000488648 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
SKIV2L-212ENST00000488648 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
SKIV2L-212ENST00000488648 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
SKIV2L-212ENST00000488648 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
SKIV2L-212ENST00000488648 WIZO95785 1651 aa22.39■■□□□ 1.18
SKIV2L-212ENST00000488648 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
SKIV2L-212ENST00000488648 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
SKIV2L-212ENST00000488648 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
SKIV2L-212ENST00000488648 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
SKIV2L-212ENST00000488648 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
SKIV2L-212ENST00000488648 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
SKIV2L-212ENST00000488648 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
SKIV2L-212ENST00000488648 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
SKIV2L-212ENST00000488648 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SKIV2L-212ENST00000488648 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
SKIV2L-212ENST00000488648 CFTRP13569 1480 aa21.66■■□□□ 1.06
SKIV2L-212ENST00000488648 NESP48681 1621 aa21.65■■□□□ 1.06
SKIV2L-212ENST00000488648 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
SKIV2L-212ENST00000488648 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
SKIV2L-212ENST00000488648 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
SKIV2L-212ENST00000488648 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
SKIV2L-212ENST00000488648 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
SKIV2L-212ENST00000488648 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
SKIV2L-212ENST00000488648 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
SKIV2L-212ENST00000488648 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
SKIV2L-212ENST00000488648 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
SKIV2L-212ENST00000488648 WDR62O43379 1518 aa21.24■□□□□ 0.99
SKIV2L-212ENST00000488648 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
SKIV2L-212ENST00000488648 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.98
SKIV2L-212ENST00000488648 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
SKIV2L-212ENST00000488648 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
SKIV2L-212ENST00000488648 CUX1P39880 1505 aa21.16■□□□□ 0.98
SKIV2L-212ENST00000488648 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SKIV2L-212ENST00000488648 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
SKIV2L-212ENST00000488648 CUX2O14529 1486 aa21.13■□□□□ 0.97
SKIV2L-212ENST00000488648 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
SKIV2L-212ENST00000488648 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
SKIV2L-212ENST00000488648 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
SKIV2L-212ENST00000488648 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
SKIV2L-212ENST00000488648 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
SKIV2L-212ENST00000488648 SOGA1O94964 1423 aa20.93■□□□□ 0.94
SKIV2L-212ENST00000488648 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
SKIV2L-212ENST00000488648 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
SKIV2L-212ENST00000488648 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
SKIV2L-212ENST00000488648 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
SKIV2L-212ENST00000488648 EIF4G3O43432 1585 aaKnown RBP20.82■□□□□ 0.92
SKIV2L-212ENST00000488648 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
SKIV2L-212ENST00000488648 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
SKIV2L-212ENST00000488648 PBRM1Q86U86 1689 aa20.77■□□□□ 0.91
SKIV2L-212ENST00000488648 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
SKIV2L-212ENST00000488648 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
SKIV2L-212ENST00000488648 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
SKIV2L-212ENST00000488648 AQRO60306 1485 aaKnown RBP eCLIP20.7■□□□□ 0.93e-8■■■■■ 35.4
SKIV2L-212ENST00000488648 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
SKIV2L-212ENST00000488648 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
SKIV2L-212ENST00000488648 EEA1Q15075 1411 aa20.65■□□□□ 0.9
SKIV2L-212ENST00000488648 CUL7Q14999 1698 aa20.62■□□□□ 0.89
SKIV2L-212ENST00000488648 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
SKIV2L-212ENST00000488648 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.89
SKIV2L-212ENST00000488648 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
SKIV2L-212ENST00000488648 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
SKIV2L-212ENST00000488648 CHD1O14646 1710 aa20.52■□□□□ 0.88
SKIV2L-212ENST00000488648 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
SKIV2L-212ENST00000488648 IGF1RP08069 1367 aa20.5■□□□□ 0.87
SKIV2L-212ENST00000488648 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
SKIV2L-212ENST00000488648 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
SKIV2L-212ENST00000488648 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
SKIV2L-212ENST00000488648 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
SKIV2L-212ENST00000488648 KIF21BO75037 1637 aa20.42■□□□□ 0.86
SKIV2L-212ENST00000488648 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
SKIV2L-212ENST00000488648 FBLN2P98095 1184 aa20.41■□□□□ 0.86
SKIV2L-212ENST00000488648 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
SKIV2L-212ENST00000488648 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
SKIV2L-212ENST00000488648 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
SKIV2L-212ENST00000488648 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
SKIV2L-212ENST00000488648 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
SKIV2L-212ENST00000488648 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
SKIV2L-212ENST00000488648 NUP160Q12769 1436 aa20.27■□□□□ 0.83
SKIV2L-212ENST00000488648 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
SKIV2L-212ENST00000488648 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms