RNA–Protein interactions for RNA: ENST00000488600.1

LPGAT1-203, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

TSL 3

Gene LPGAT1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-203ENST00000488600 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
LPGAT1-203ENST00000488600 ABCC9O60706 1549 aa44.55■■■■■ 4.72
LPGAT1-203ENST00000488600 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
LPGAT1-203ENST00000488600 RB1CC1Q8TDY2 1594 aa42.4■■■■■ 4.38
LPGAT1-203ENST00000488600 DCAF8L2P0C7V8 631 aa42.27■■■■■ 4.36
LPGAT1-203ENST00000488600 NACADO15069 1562 aa42.16■■■■■ 4.34
LPGAT1-203ENST00000488600 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
LPGAT1-203ENST00000488600 PABPN1Q86U42 306 aaKnown RBP eCLIP41.63■■■■■ 4.25
LPGAT1-203ENST00000488600 MYO15BQ96JP2 1530 aa41.63■■■■■ 4.25
LPGAT1-203ENST00000488600 ZCCHC6Q5VYS8 1495 aaKnown RBP41.31■■■■■ 4.2
LPGAT1-203ENST00000488600 UNC13AQ9UPW8 1703 aa41.21■■■■■ 4.19
LPGAT1-203ENST00000488600 DCAF1Q9Y4B6 1507 aa41.15■■■■■ 4.18
LPGAT1-203ENST00000488600 BICRAQ9NZM4 1560 aa41.1■■■■■ 4.17
LPGAT1-203ENST00000488600 SCRIBQ14160 1630 aa40.65■■■■■ 4.1
LPGAT1-203ENST00000488600 SHROOM4Q9ULL8 1493 aa40.61■■■■■ 4.09
LPGAT1-203ENST00000488600 CC2D2AQ9P2K1 1620 aa40.16■■■■■ 4.02
LPGAT1-203ENST00000488600 EIF4G1Q04637 1599 aaKnown RBP40.13■■■■■ 4.01
LPGAT1-203ENST00000488600 CECR2Q9BXF3 1484 aa40.12■■■■■ 4.01
LPGAT1-203ENST00000488600 NCAPD3P42695 1498 aa38.98■■■■□ 3.83
LPGAT1-203ENST00000488600 ATAD2BQ9ULI0 1458 aa38.88■■■■□ 3.81
LPGAT1-203ENST00000488600 SMARCA4P51532 1647 aa38.78■■■■□ 3.8
LPGAT1-203ENST00000488600 SMARCA2P51531 1590 aa38.74■■■■□ 3.79
LPGAT1-203ENST00000488600 BAZ1AQ9NRL2 1556 aaPredicted RBP38.67■■■■□ 3.78
LPGAT1-203ENST00000488600 HMGXB3Q12766 1538 aa38.61■■■■□ 3.77
LPGAT1-203ENST00000488600 BAZ1BQ9UIG0 1483 aaKnown RBP38.51■■■■□ 3.76
LPGAT1-203ENST00000488600 ERCC6Q03468 1493 aa38.48■■■■□ 3.75
LPGAT1-203ENST00000488600 MROH2BQ7Z745 1585 aa38.4■■■■□ 3.74
LPGAT1-203ENST00000488600 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
LPGAT1-203ENST00000488600 CUX2O14529 1486 aa38.3■■■■□ 3.72
LPGAT1-203ENST00000488600 NESP48681 1621 aa38.28■■■■□ 3.72
LPGAT1-203ENST00000488600 DNAJC5Q9H3Z4 198 aa38.22■■■■□ 3.71
LPGAT1-203ENST00000488600 LAMC3Q9Y6N6 1575 aa38■■■■□ 3.67
LPGAT1-203ENST00000488600 PDS5BQ9NTI5 1447 aa37.91■■■■□ 3.66
LPGAT1-203ENST00000488600 WIZO95785 1651 aa37.88■■■■□ 3.66
LPGAT1-203ENST00000488600 CADPSQ9ULU8 1353 aa37.86■■■■□ 3.65
LPGAT1-203ENST00000488600 THOC2Q8NI27 1593 aaKnown RBP37.73■■■■□ 3.63
LPGAT1-203ENST00000488600 RSF1Q96T23 1441 aaPredicted RBP37.73■■■■□ 3.63
LPGAT1-203ENST00000488600 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.62
LPGAT1-203ENST00000488600 MRC2Q9UBG0 1479 aa37.49■■■■□ 3.59
LPGAT1-203ENST00000488600 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
LPGAT1-203ENST00000488600 CFTRP13569 1480 aa37.4■■■■□ 3.58
LPGAT1-203ENST00000488600 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
LPGAT1-203ENST00000488600 FANCD2Q9BXW9 1451 aa37.38■■■■□ 3.57
LPGAT1-203ENST00000488600 WDR62O43379 1518 aa37.33■■■■□ 3.57
LPGAT1-203ENST00000488600 CCDC88BA6NC98 1476 aa37.11■■■■□ 3.53
LPGAT1-203ENST00000488600 URB2Q14146 1524 aaKnown RBP37.01■■■■□ 3.52
LPGAT1-203ENST00000488600 PRDM2Q13029 1718 aa36.76■■■■□ 3.47
LPGAT1-203ENST00000488600 OSCARQ8IYS5 282 aa36.75■■■■□ 3.47
LPGAT1-203ENST00000488600 TRIM41Q8WV44 630 aa36.66■■■■□ 3.46
LPGAT1-203ENST00000488600 TOPBP1Q92547 1522 aa36.65■■■■□ 3.46
LPGAT1-203ENST00000488600 IFT140Q96RY7 1462 aa36.65■■■■□ 3.46
LPGAT1-203ENST00000488600 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
LPGAT1-203ENST00000488600 ZNF608Q9ULD9 1512 aaPredicted RBP36.55■■■■□ 3.44
LPGAT1-203ENST00000488600 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
LPGAT1-203ENST00000488600 SUPT5HO00267 1087 aaKnown RBP36.34■■■■□ 3.41
LPGAT1-203ENST00000488600 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.42e-11■■■■■ 45
LPGAT1-203ENST00000488600 POLA1P09884 1462 aaPredicted RBP36.3■■■■□ 3.4
LPGAT1-203ENST00000488600 EIF4G3O43432 1585 aaKnown RBP36.25■■■■□ 3.39
LPGAT1-203ENST00000488600 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
LPGAT1-203ENST00000488600 SOGA1O94964 1423 aa36.23■■■■□ 3.39
LPGAT1-203ENST00000488600 RAD54L2Q9Y4B4 1467 aa36.2■■■■□ 3.39
LPGAT1-203ENST00000488600 FBLN2P98095 1184 aa36.16■■■■□ 3.38
LPGAT1-203ENST00000488600 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
LPGAT1-203ENST00000488600 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
LPGAT1-203ENST00000488600 CUX1P39880 1505 aa36.06■■■■□ 3.36
LPGAT1-203ENST00000488600 RIMBP3CA6NJZ7 1639 aa36.01■■■■□ 3.35
LPGAT1-203ENST00000488600 RIMBP3BA6NNM3 1639 aa36.01■■■■□ 3.35
LPGAT1-203ENST00000488600 RIMBP3Q9UFD9 1639 aa36.01■■■■□ 3.35
LPGAT1-203ENST00000488600 ARHGEF11O15085 1522 aa35.97■■■■□ 3.35
LPGAT1-203ENST00000488600 CHMP7Q8WUX9 453 aaPredicted RBP35.91■■■■□ 3.34
LPGAT1-203ENST00000488600 CYB5RLQ6IPT4 315 aa35.89■■■■□ 3.34
LPGAT1-203ENST00000488600 CHD1O14646 1710 aa35.88■■■■□ 3.34
LPGAT1-203ENST00000488600 SNAPC4Q5SXM2 1469 aa35.88■■■■□ 3.33
LPGAT1-203ENST00000488600 WDR97A6NE52 1622 aa35.88■■■■□ 3.33
LPGAT1-203ENST00000488600 GRIN2BQ13224 1484 aa35.84■■■■□ 3.33
LPGAT1-203ENST00000488600 MAGI1Q96QZ7 1491 aaPredicted RBP35.8■■■■□ 3.32
LPGAT1-203ENST00000488600 GAPVD1Q14C86 1478 aa35.74■■■■□ 3.31
LPGAT1-203ENST00000488600 ABCA10Q8WWZ4 1543 aa35.69■■■■□ 3.3
LPGAT1-203ENST00000488600 SYNJ2O15056 1496 aa35.68■■■■□ 3.3
LPGAT1-203ENST00000488600 WRNQ14191 1432 aaPredicted RBP eCLIP35.66■■■■□ 3.3
LPGAT1-203ENST00000488600 ARAP1Q96P48 1450 aa35.63■■■■□ 3.29
LPGAT1-203ENST00000488600 SYNJ1O43426 1573 aa35.61■■■■□ 3.29
LPGAT1-203ENST00000488600 CLASP1Q7Z460 1538 aa35.57■■■■□ 3.29
LPGAT1-203ENST00000488600 ABCA5Q8WWZ7 1642 aa35.52■■■■□ 3.28
LPGAT1-203ENST00000488600 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
LPGAT1-203ENST00000488600 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
LPGAT1-203ENST00000488600 TRHP20396 242 aaPredicted RBP35.46■■■■□ 3.27
LPGAT1-203ENST00000488600 BIVM-ERCC5R4GMW8 1640 aa35.43■■■■□ 3.26
LPGAT1-203ENST00000488600 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
LPGAT1-203ENST00000488600 FHAD1B1AJZ9 1412 aa35.32■■■■□ 3.24
LPGAT1-203ENST00000488600 ADAMTS12P58397 1594 aa35.26■■■■□ 3.24
LPGAT1-203ENST00000488600 ERICH3Q5RHP9 1530 aa35.23■■■■□ 3.23
LPGAT1-203ENST00000488600 NUP160Q12769 1436 aa35.23■■■■□ 3.23
LPGAT1-203ENST00000488600 CEP170Q5SW79 1584 aa35.15■■■■□ 3.22
LPGAT1-203ENST00000488600 ERCC6L2Q5T890 1561 aa35.05■■■■□ 3.2
LPGAT1-203ENST00000488600 JPH4Q96JJ6 628 aa35.02■■■■□ 3.2
LPGAT1-203ENST00000488600 KIF27Q86VH2 1401 aa34.95■■■■□ 3.19
LPGAT1-203ENST00000488600 IGF1RP08069 1367 aa34.94■■■■□ 3.18
LPGAT1-203ENST00000488600 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
LPGAT1-203ENST00000488600 SHROOM2Q13796 1616 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms