RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
SUPT20H-218ENST00000488590 ABCC9O60706 1549 aa23.23■■□□□ 1.31
SUPT20H-218ENST00000488590 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
SUPT20H-218ENST00000488590 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
SUPT20H-218ENST00000488590 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
SUPT20H-218ENST00000488590 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
SUPT20H-218ENST00000488590 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
SUPT20H-218ENST00000488590 NACADO15069 1562 aa21.35■■□□□ 1.01
SUPT20H-218ENST00000488590 UNC13AQ9UPW8 1703 aa21.22■□□□□ 0.99
SUPT20H-218ENST00000488590 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
SUPT20H-218ENST00000488590 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
SUPT20H-218ENST00000488590 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
SUPT20H-218ENST00000488590 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
SUPT20H-218ENST00000488590 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
SUPT20H-218ENST00000488590 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
SUPT20H-218ENST00000488590 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
SUPT20H-218ENST00000488590 CUX2O14529 1486 aa20.37■□□□□ 0.85
SUPT20H-218ENST00000488590 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
SUPT20H-218ENST00000488590 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
SUPT20H-218ENST00000488590 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
SUPT20H-218ENST00000488590 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
SUPT20H-218ENST00000488590 TRIM41Q8WV44 630 aa20■□□□□ 0.79
SUPT20H-218ENST00000488590 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
SUPT20H-218ENST00000488590 NESP48681 1621 aa19.75■□□□□ 0.75
SUPT20H-218ENST00000488590 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
SUPT20H-218ENST00000488590 ATAD2BQ9ULI0 1458 aa19.59■□□□□ 0.73
SUPT20H-218ENST00000488590 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
SUPT20H-218ENST00000488590 SMARCA2P51531 1590 aa19.45■□□□□ 0.7
SUPT20H-218ENST00000488590 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
SUPT20H-218ENST00000488590 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
SUPT20H-218ENST00000488590 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
SUPT20H-218ENST00000488590 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
SUPT20H-218ENST00000488590 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
SUPT20H-218ENST00000488590 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
SUPT20H-218ENST00000488590 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
SUPT20H-218ENST00000488590 WDR62O43379 1518 aa19.23■□□□□ 0.67
SUPT20H-218ENST00000488590 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
SUPT20H-218ENST00000488590 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
SUPT20H-218ENST00000488590 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
SUPT20H-218ENST00000488590 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
SUPT20H-218ENST00000488590 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
SUPT20H-218ENST00000488590 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
SUPT20H-218ENST00000488590 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
SUPT20H-218ENST00000488590 ARHGEF11O15085 1522 aa19■□□□□ 0.63
SUPT20H-218ENST00000488590 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
SUPT20H-218ENST00000488590 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
SUPT20H-218ENST00000488590 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
SUPT20H-218ENST00000488590 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
SUPT20H-218ENST00000488590 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
SUPT20H-218ENST00000488590 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
SUPT20H-218ENST00000488590 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
SUPT20H-218ENST00000488590 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
SUPT20H-218ENST00000488590 CFTRP13569 1480 aa18.73■□□□□ 0.59
SUPT20H-218ENST00000488590 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
SUPT20H-218ENST00000488590 WIZO95785 1651 aa18.62■□□□□ 0.57
SUPT20H-218ENST00000488590 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
SUPT20H-218ENST00000488590 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
SUPT20H-218ENST00000488590 CHD1O14646 1710 aa18.52■□□□□ 0.56
SUPT20H-218ENST00000488590 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.54
SUPT20H-218ENST00000488590 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
SUPT20H-218ENST00000488590 ILDR1Q86SU0 546 aaPredicted RBP18.4■□□□□ 0.54
SUPT20H-218ENST00000488590 FBLN2P98095 1184 aa18.38■□□□□ 0.53
SUPT20H-218ENST00000488590 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
SUPT20H-218ENST00000488590 TARBP1Q13395 1621 aaKnown RBP18.36■□□□□ 0.53
SUPT20H-218ENST00000488590 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
SUPT20H-218ENST00000488590 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
SUPT20H-218ENST00000488590 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
SUPT20H-218ENST00000488590 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
SUPT20H-218ENST00000488590 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
SUPT20H-218ENST00000488590 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
SUPT20H-218ENST00000488590 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
SUPT20H-218ENST00000488590 SYNJ1O43426 1573 aa18.18■□□□□ 0.5
SUPT20H-218ENST00000488590 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
SUPT20H-218ENST00000488590 RAD54L2Q9Y4B4 1467 aa18.16■□□□□ 0.5
SUPT20H-218ENST00000488590 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
SUPT20H-218ENST00000488590 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
SUPT20H-218ENST00000488590 KDM4FA0A1W2PPD8 638 aa18.11■□□□□ 0.49
SUPT20H-218ENST00000488590 MAGI1Q96QZ7 1491 aaPredicted RBP18.09■□□□□ 0.49
SUPT20H-218ENST00000488590 SOGA1O94964 1423 aa18.07■□□□□ 0.48
SUPT20H-218ENST00000488590 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
SUPT20H-218ENST00000488590 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
SUPT20H-218ENST00000488590 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
SUPT20H-218ENST00000488590 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
SUPT20H-218ENST00000488590 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
SUPT20H-218ENST00000488590 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
SUPT20H-218ENST00000488590 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
SUPT20H-218ENST00000488590 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
SUPT20H-218ENST00000488590 PBRM1Q86U86 1689 aa17.83■□□□□ 0.44
SUPT20H-218ENST00000488590 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
SUPT20H-218ENST00000488590 CUX1P39880 1505 aa17.82■□□□□ 0.44
SUPT20H-218ENST00000488590 SHROOM2Q13796 1616 aa17.81■□□□□ 0.44
SUPT20H-218ENST00000488590 NUP160Q12769 1436 aa17.81■□□□□ 0.44
SUPT20H-218ENST00000488590 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
SUPT20H-218ENST00000488590 KDM6BO15054 1643 aa17.78■□□□□ 0.44
SUPT20H-218ENST00000488590 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
SUPT20H-218ENST00000488590 ABCA5Q8WWZ7 1642 aa17.75■□□□□ 0.43
SUPT20H-218ENST00000488590 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
SUPT20H-218ENST00000488590 HECW2Q9P2P5 1572 aa17.72■□□□□ 0.43
SUPT20H-218ENST00000488590 ABCA10Q8WWZ4 1543 aa17.7■□□□□ 0.42
SUPT20H-218ENST00000488590 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms