RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
HLA-DPB1-216ENST00000488575 ABCC9O60706 1549 aa30.72■■■□□ 2.51
HLA-DPB1-216ENST00000488575 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
HLA-DPB1-216ENST00000488575 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
HLA-DPB1-216ENST00000488575 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
HLA-DPB1-216ENST00000488575 NACADO15069 1562 aa28.54■■■□□ 2.16
HLA-DPB1-216ENST00000488575 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
HLA-DPB1-216ENST00000488575 UNC13AQ9UPW8 1703 aa28.33■■■□□ 2.13
HLA-DPB1-216ENST00000488575 BICRAQ9NZM4 1560 aa28.14■■■□□ 2.1
HLA-DPB1-216ENST00000488575 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
HLA-DPB1-216ENST00000488575 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
HLA-DPB1-216ENST00000488575 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
HLA-DPB1-216ENST00000488575 CECR2Q9BXF3 1484 aa27.82■■■□□ 2.04
HLA-DPB1-216ENST00000488575 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
HLA-DPB1-216ENST00000488575 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
HLA-DPB1-216ENST00000488575 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
HLA-DPB1-216ENST00000488575 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
HLA-DPB1-216ENST00000488575 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
HLA-DPB1-216ENST00000488575 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
HLA-DPB1-216ENST00000488575 CUX2O14529 1486 aa26.98■■□□□ 1.91
HLA-DPB1-216ENST00000488575 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
HLA-DPB1-216ENST00000488575 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
HLA-DPB1-216ENST00000488575 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
HLA-DPB1-216ENST00000488575 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
HLA-DPB1-216ENST00000488575 NESP48681 1621 aa26.14■■□□□ 1.77
HLA-DPB1-216ENST00000488575 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
HLA-DPB1-216ENST00000488575 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
HLA-DPB1-216ENST00000488575 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
HLA-DPB1-216ENST00000488575 LAMC3Q9Y6N6 1575 aa25.92■■□□□ 1.74
HLA-DPB1-216ENST00000488575 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
HLA-DPB1-216ENST00000488575 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
HLA-DPB1-216ENST00000488575 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
HLA-DPB1-216ENST00000488575 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
HLA-DPB1-216ENST00000488575 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
HLA-DPB1-216ENST00000488575 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
HLA-DPB1-216ENST00000488575 WDR62O43379 1518 aa25.6■■□□□ 1.69
HLA-DPB1-216ENST00000488575 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
HLA-DPB1-216ENST00000488575 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
HLA-DPB1-216ENST00000488575 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
HLA-DPB1-216ENST00000488575 RIMBP3CA6NJZ7 1639 aa25.33■■□□□ 1.65
HLA-DPB1-216ENST00000488575 RIMBP3BA6NNM3 1639 aa25.33■■□□□ 1.65
HLA-DPB1-216ENST00000488575 RIMBP3Q9UFD9 1639 aa25.33■■□□□ 1.65
HLA-DPB1-216ENST00000488575 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
HLA-DPB1-216ENST00000488575 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
HLA-DPB1-216ENST00000488575 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
HLA-DPB1-216ENST00000488575 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
HLA-DPB1-216ENST00000488575 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
HLA-DPB1-216ENST00000488575 CFTRP13569 1480 aa25■■□□□ 1.59
HLA-DPB1-216ENST00000488575 WIZO95785 1651 aa24.94■■□□□ 1.58
HLA-DPB1-216ENST00000488575 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
HLA-DPB1-216ENST00000488575 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
HLA-DPB1-216ENST00000488575 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
HLA-DPB1-216ENST00000488575 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
HLA-DPB1-216ENST00000488575 ARAP1Q96P48 1450 aa24.83■■□□□ 1.56
HLA-DPB1-216ENST00000488575 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
HLA-DPB1-216ENST00000488575 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
HLA-DPB1-216ENST00000488575 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
HLA-DPB1-216ENST00000488575 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
HLA-DPB1-216ENST00000488575 CHD1O14646 1710 aa24.71■■□□□ 1.55
HLA-DPB1-216ENST00000488575 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
HLA-DPB1-216ENST00000488575 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
HLA-DPB1-216ENST00000488575 ABCC8Q09428 1581 aa24.51■■□□□ 1.51
HLA-DPB1-216ENST00000488575 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
HLA-DPB1-216ENST00000488575 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.51
HLA-DPB1-216ENST00000488575 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
HLA-DPB1-216ENST00000488575 CLASP1Q7Z460 1538 aa24.42■■□□□ 1.5
HLA-DPB1-216ENST00000488575 FBLN2P98095 1184 aa24.39■■□□□ 1.49
HLA-DPB1-216ENST00000488575 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
HLA-DPB1-216ENST00000488575 POLA1P09884 1462 aaPredicted RBP24.28■■□□□ 1.48
HLA-DPB1-216ENST00000488575 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
HLA-DPB1-216ENST00000488575 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
HLA-DPB1-216ENST00000488575 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
HLA-DPB1-216ENST00000488575 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
HLA-DPB1-216ENST00000488575 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
HLA-DPB1-216ENST00000488575 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
HLA-DPB1-216ENST00000488575 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
HLA-DPB1-216ENST00000488575 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
HLA-DPB1-216ENST00000488575 SOGA1O94964 1423 aa24.1■■□□□ 1.45
HLA-DPB1-216ENST00000488575 SYNJ2O15056 1496 aa24.1■■□□□ 1.45
HLA-DPB1-216ENST00000488575 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
HLA-DPB1-216ENST00000488575 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
HLA-DPB1-216ENST00000488575 KIF13AQ9H1H9 1805 aa23.97■■□□□ 1.43
HLA-DPB1-216ENST00000488575 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.42
HLA-DPB1-216ENST00000488575 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
HLA-DPB1-216ENST00000488575 ERCC6L2Q5T890 1561 aa23.9■■□□□ 1.42
HLA-DPB1-216ENST00000488575 CUX1P39880 1505 aa23.81■■□□□ 1.4
HLA-DPB1-216ENST00000488575 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
HLA-DPB1-216ENST00000488575 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
HLA-DPB1-216ENST00000488575 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
HLA-DPB1-216ENST00000488575 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
HLA-DPB1-216ENST00000488575 KDM4FA0A1W2PPD8 638 aa23.73■■□□□ 1.39
HLA-DPB1-216ENST00000488575 NUP160Q12769 1436 aa23.72■■□□□ 1.39
HLA-DPB1-216ENST00000488575 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
HLA-DPB1-216ENST00000488575 ABCC10Q5T3U5 1492 aa23.68■■□□□ 1.38
HLA-DPB1-216ENST00000488575 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
HLA-DPB1-216ENST00000488575 KDM6BO15054 1643 aa23.63■■□□□ 1.37
HLA-DPB1-216ENST00000488575 MAPKBP1O60336 1514 aa23.62■■□□□ 1.37
HLA-DPB1-216ENST00000488575 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
HLA-DPB1-216ENST00000488575 FAM69CQ0P6D2 419 aa23.58■■□□□ 1.37
HLA-DPB1-216ENST00000488575 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms