RNA–Protein interactions for RNA: ENST00000488545.1

LINC00877-207, long intergenic non-protein coding RNA 877, humanhuman

TSL 3 BASIC

Gene LINC00877, Length 1,561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-207ENST00000488545 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
LINC00877-207ENST00000488545 ABCC9O60706 1549 aa27.03■■□□□ 1.92
LINC00877-207ENST00000488545 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
LINC00877-207ENST00000488545 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
LINC00877-207ENST00000488545 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
LINC00877-207ENST00000488545 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
LINC00877-207ENST00000488545 NACADO15069 1562 aa25.29■■□□□ 1.64
LINC00877-207ENST00000488545 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
LINC00877-207ENST00000488545 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
LINC00877-207ENST00000488545 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
LINC00877-207ENST00000488545 BICRAQ9NZM4 1560 aa24.75■■□□□ 1.55
LINC00877-207ENST00000488545 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
LINC00877-207ENST00000488545 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
LINC00877-207ENST00000488545 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
LINC00877-207ENST00000488545 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
LINC00877-207ENST00000488545 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
LINC00877-207ENST00000488545 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
LINC00877-207ENST00000488545 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
LINC00877-207ENST00000488545 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
LINC00877-207ENST00000488545 CUX2O14529 1486 aa23.44■■□□□ 1.34
LINC00877-207ENST00000488545 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
LINC00877-207ENST00000488545 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
LINC00877-207ENST00000488545 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
LINC00877-207ENST00000488545 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
LINC00877-207ENST00000488545 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
LINC00877-207ENST00000488545 NESP48681 1621 aa23.09■■□□□ 1.29
LINC00877-207ENST00000488545 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
LINC00877-207ENST00000488545 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
LINC00877-207ENST00000488545 BAZ1AQ9NRL2 1556 aaPredicted RBP22.94■■□□□ 1.26
LINC00877-207ENST00000488545 LAMC3Q9Y6N6 1575 aa22.87■■□□□ 1.25
LINC00877-207ENST00000488545 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
LINC00877-207ENST00000488545 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
LINC00877-207ENST00000488545 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.24
LINC00877-207ENST00000488545 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
LINC00877-207ENST00000488545 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
LINC00877-207ENST00000488545 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
LINC00877-207ENST00000488545 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
LINC00877-207ENST00000488545 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
LINC00877-207ENST00000488545 WDR62O43379 1518 aa22.5■■□□□ 1.19
LINC00877-207ENST00000488545 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
LINC00877-207ENST00000488545 OSCARQ8IYS5 282 aa22.43■■□□□ 1.18
LINC00877-207ENST00000488545 WIZO95785 1651 aa22.42■■□□□ 1.18
LINC00877-207ENST00000488545 FANCD2Q9BXW9 1451 aa22.39■■□□□ 1.18
LINC00877-207ENST00000488545 CFTRP13569 1480 aa22.29■■□□□ 1.16
LINC00877-207ENST00000488545 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
LINC00877-207ENST00000488545 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
LINC00877-207ENST00000488545 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
LINC00877-207ENST00000488545 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
LINC00877-207ENST00000488545 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
LINC00877-207ENST00000488545 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
LINC00877-207ENST00000488545 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
LINC00877-207ENST00000488545 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
LINC00877-207ENST00000488545 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
LINC00877-207ENST00000488545 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
LINC00877-207ENST00000488545 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
LINC00877-207ENST00000488545 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
LINC00877-207ENST00000488545 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
LINC00877-207ENST00000488545 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
LINC00877-207ENST00000488545 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
LINC00877-207ENST00000488545 FBLN2P98095 1184 aa21.84■■□□□ 1.09
LINC00877-207ENST00000488545 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
LINC00877-207ENST00000488545 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
LINC00877-207ENST00000488545 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
LINC00877-207ENST00000488545 CHD1O14646 1710 aa21.7■■□□□ 1.06
LINC00877-207ENST00000488545 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
LINC00877-207ENST00000488545 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
LINC00877-207ENST00000488545 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
LINC00877-207ENST00000488545 SOGA1O94964 1423 aa21.62■■□□□ 1.05
LINC00877-207ENST00000488545 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
LINC00877-207ENST00000488545 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
LINC00877-207ENST00000488545 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
LINC00877-207ENST00000488545 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
LINC00877-207ENST00000488545 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
LINC00877-207ENST00000488545 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
LINC00877-207ENST00000488545 FGD5Q6ZNL6 1462 aa21.47■■□□□ 1.03
LINC00877-207ENST00000488545 MAGI1Q96QZ7 1491 aaPredicted RBP21.46■■□□□ 1.03
LINC00877-207ENST00000488545 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
LINC00877-207ENST00000488545 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
LINC00877-207ENST00000488545 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
LINC00877-207ENST00000488545 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
LINC00877-207ENST00000488545 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
LINC00877-207ENST00000488545 CUX1P39880 1505 aa21.37■■□□□ 1.01
LINC00877-207ENST00000488545 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
LINC00877-207ENST00000488545 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
LINC00877-207ENST00000488545 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.99
LINC00877-207ENST00000488545 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.98
LINC00877-207ENST00000488545 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
LINC00877-207ENST00000488545 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
LINC00877-207ENST00000488545 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
LINC00877-207ENST00000488545 NUP160Q12769 1436 aa21.07■□□□□ 0.96
LINC00877-207ENST00000488545 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
LINC00877-207ENST00000488545 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
LINC00877-207ENST00000488545 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
LINC00877-207ENST00000488545 JPH4Q96JJ6 628 aa20.97■□□□□ 0.95
LINC00877-207ENST00000488545 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
LINC00877-207ENST00000488545 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
LINC00877-207ENST00000488545 NPM1P06748 294 aaKnown RBP eCLIP20.96■□□□□ 0.95
LINC00877-207ENST00000488545 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
LINC00877-207ENST00000488545 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
LINC00877-207ENST00000488545 FAM69CQ0P6D2 419 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms