RNA–Protein interactions for RNA: ENST00000488449.1

TMCO4-204, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 3

Gene TMCO4, Length 647 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-204ENST00000488449 NISCHQ9Y2I1 1504 aa40.81■■■■■ 4.12
TMCO4-204ENST00000488449 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
TMCO4-204ENST00000488449 ABCC9O60706 1549 aa35.72■■■■□ 3.31
TMCO4-204ENST00000488449 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
TMCO4-204ENST00000488449 NACADO15069 1562 aa34.34■■■■□ 3.09
TMCO4-204ENST00000488449 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
TMCO4-204ENST00000488449 ZCCHC6Q5VYS8 1495 aaKnown RBP33.98■■■■□ 3.03
TMCO4-204ENST00000488449 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
TMCO4-204ENST00000488449 DCAF8L2P0C7V8 631 aa33.78■■■■□ 3
TMCO4-204ENST00000488449 UNC13AQ9UPW8 1703 aa33.69■■■□□ 2.98
TMCO4-204ENST00000488449 BICRAQ9NZM4 1560 aa33.41■■■□□ 2.94
TMCO4-204ENST00000488449 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
TMCO4-204ENST00000488449 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
TMCO4-204ENST00000488449 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
TMCO4-204ENST00000488449 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
TMCO4-204ENST00000488449 EIF4G1Q04637 1599 aaKnown RBP32.5■■■□□ 2.79
TMCO4-204ENST00000488449 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
TMCO4-204ENST00000488449 CECR2Q9BXF3 1484 aa32.18■■■□□ 2.74
TMCO4-204ENST00000488449 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
TMCO4-204ENST00000488449 NCAPD3P42695 1498 aa31.66■■■□□ 2.66
TMCO4-204ENST00000488449 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
TMCO4-204ENST00000488449 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
TMCO4-204ENST00000488449 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
TMCO4-204ENST00000488449 PEG3Q9GZU2 1588 aa31.55■■■□□ 2.64
TMCO4-204ENST00000488449 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
TMCO4-204ENST00000488449 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.61
TMCO4-204ENST00000488449 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
TMCO4-204ENST00000488449 WIZO95785 1651 aa31.03■■■□□ 2.56
TMCO4-204ENST00000488449 RSF1Q96T23 1441 aaPredicted RBP30.93■■■□□ 2.54
TMCO4-204ENST00000488449 LAMC3Q9Y6N6 1575 aa30.89■■■□□ 2.54
TMCO4-204ENST00000488449 NESP48681 1621 aa30.86■■■□□ 2.53
TMCO4-204ENST00000488449 ERCC6Q03468 1493 aa30.81■■■□□ 2.52
TMCO4-204ENST00000488449 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
TMCO4-204ENST00000488449 CUX2O14529 1486 aa30.75■■■□□ 2.51
TMCO4-204ENST00000488449 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
TMCO4-204ENST00000488449 THOC2Q8NI27 1593 aaKnown RBP30.61■■■□□ 2.49
TMCO4-204ENST00000488449 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
TMCO4-204ENST00000488449 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
TMCO4-204ENST00000488449 CFTRP13569 1480 aa30.47■■■□□ 2.47
TMCO4-204ENST00000488449 PRDM2Q13029 1718 aa30.35■■■□□ 2.45
TMCO4-204ENST00000488449 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
TMCO4-204ENST00000488449 WDR62O43379 1518 aa30.31■■■□□ 2.44
TMCO4-204ENST00000488449 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
TMCO4-204ENST00000488449 FANCD2Q9BXW9 1451 aa30.3■■■□□ 2.44
TMCO4-204ENST00000488449 CEP164Q9UPV0 1460 aa30.3■■■□□ 2.44
TMCO4-204ENST00000488449 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
TMCO4-204ENST00000488449 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
TMCO4-204ENST00000488449 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
TMCO4-204ENST00000488449 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
TMCO4-204ENST00000488449 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
TMCO4-204ENST00000488449 IFT140Q96RY7 1462 aa29.69■■■□□ 2.34
TMCO4-204ENST00000488449 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
TMCO4-204ENST00000488449 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
TMCO4-204ENST00000488449 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
TMCO4-204ENST00000488449 ZNF608Q9ULD9 1512 aaPredicted RBP29.52■■■□□ 2.32
TMCO4-204ENST00000488449 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
TMCO4-204ENST00000488449 CUX1P39880 1505 aa29.48■■■□□ 2.31
TMCO4-204ENST00000488449 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
TMCO4-204ENST00000488449 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
TMCO4-204ENST00000488449 SOGA1O94964 1423 aa29.33■■■□□ 2.29
TMCO4-204ENST00000488449 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
TMCO4-204ENST00000488449 AQRO60306 1485 aaKnown RBP eCLIP29.27■■■□□ 2.28
TMCO4-204ENST00000488449 BIVM-ERCC5R4GMW8 1640 aa29.24■■■□□ 2.27
TMCO4-204ENST00000488449 OSCARQ8IYS5 282 aa29.24■■■□□ 2.27
TMCO4-204ENST00000488449 TOP2BQ02880 1626 aa29.21■■■□□ 2.27
TMCO4-204ENST00000488449 ABCA10Q8WWZ4 1543 aa29.17■■■□□ 2.26
TMCO4-204ENST00000488449 CHD1O14646 1710 aa29.16■■■□□ 2.26
TMCO4-204ENST00000488449 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
TMCO4-204ENST00000488449 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
TMCO4-204ENST00000488449 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
TMCO4-204ENST00000488449 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
TMCO4-204ENST00000488449 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
TMCO4-204ENST00000488449 GRIN2BQ13224 1484 aa29.09■■■□□ 2.25
TMCO4-204ENST00000488449 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
TMCO4-204ENST00000488449 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
TMCO4-204ENST00000488449 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
TMCO4-204ENST00000488449 SYNJ2O15056 1496 aa28.96■■■□□ 2.23
TMCO4-204ENST00000488449 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
TMCO4-204ENST00000488449 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
TMCO4-204ENST00000488449 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
TMCO4-204ENST00000488449 ARHGEF11O15085 1522 aa28.89■■■□□ 2.21
TMCO4-204ENST00000488449 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.21
TMCO4-204ENST00000488449 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
TMCO4-204ENST00000488449 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
TMCO4-204ENST00000488449 FBLN2P98095 1184 aa28.8■■■□□ 2.2
TMCO4-204ENST00000488449 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
TMCO4-204ENST00000488449 GRIN2AQ12879 1464 aa28.73■■■□□ 2.19
TMCO4-204ENST00000488449 FHAD1B1AJZ9 1412 aa28.71■■■□□ 2.19
TMCO4-204ENST00000488449 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
TMCO4-204ENST00000488449 NUP160Q12769 1436 aa28.65■■■□□ 2.18
TMCO4-204ENST00000488449 ARAP1Q96P48 1450 aa28.63■■■□□ 2.17
TMCO4-204ENST00000488449 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
TMCO4-204ENST00000488449 KIF27Q86VH2 1401 aa28.56■■■□□ 2.16
TMCO4-204ENST00000488449 CUL7Q14999 1698 aa28.54■■■□□ 2.16
TMCO4-204ENST00000488449 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
TMCO4-204ENST00000488449 IGF1RP08069 1367 aa28.47■■■□□ 2.15
TMCO4-204ENST00000488449 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
TMCO4-204ENST00000488449 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
TMCO4-204ENST00000488449 ERCC6L2Q5T890 1561 aa28.35■■■□□ 2.13
TMCO4-204ENST00000488449 KIAA0586Q9BVV6 1533 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms