RNA–Protein interactions for RNA: ENST00000488428.1

TRAF5-206, Transcript of TNF receptor associated factor 5, humanhuman

TSL 5

Gene TRAF5, Length 905 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-206ENST00000488428 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
TRAF5-206ENST00000488428 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
TRAF5-206ENST00000488428 ABCC9O60706 1549 aa37.37■■■■□ 3.57
TRAF5-206ENST00000488428 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
TRAF5-206ENST00000488428 DCAF8L2P0C7V8 631 aa35.54■■■■□ 3.28
TRAF5-206ENST00000488428 NACADO15069 1562 aa35.47■■■■□ 3.27
TRAF5-206ENST00000488428 MYO15BQ96JP2 1530 aa35.03■■■■□ 3.2
TRAF5-206ENST00000488428 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
TRAF5-206ENST00000488428 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
TRAF5-206ENST00000488428 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
TRAF5-206ENST00000488428 DNAJC5BQ9UF47 199 aa34.76■■■■□ 3.16
TRAF5-206ENST00000488428 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.15
TRAF5-206ENST00000488428 BICRAQ9NZM4 1560 aa34.64■■■■□ 3.14
TRAF5-206ENST00000488428 SCRIBQ14160 1630 aa34.41■■■■□ 3.1
TRAF5-206ENST00000488428 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
TRAF5-206ENST00000488428 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
TRAF5-206ENST00000488428 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
TRAF5-206ENST00000488428 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
TRAF5-206ENST00000488428 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
TRAF5-206ENST00000488428 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
TRAF5-206ENST00000488428 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
TRAF5-206ENST00000488428 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
TRAF5-206ENST00000488428 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
TRAF5-206ENST00000488428 HMGXB3Q12766 1538 aa32.52■■■□□ 2.8
TRAF5-206ENST00000488428 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
TRAF5-206ENST00000488428 BAZ1BQ9UIG0 1483 aaKnown RBP32.44■■■□□ 2.78
TRAF5-206ENST00000488428 PEG3Q9GZU2 1588 aa32.42■■■□□ 2.78
TRAF5-206ENST00000488428 NESP48681 1621 aa32.22■■■□□ 2.75
TRAF5-206ENST00000488428 ERCC6Q03468 1493 aa32.2■■■□□ 2.75
TRAF5-206ENST00000488428 WIZO95785 1651 aa32.18■■■□□ 2.74
TRAF5-206ENST00000488428 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
TRAF5-206ENST00000488428 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
TRAF5-206ENST00000488428 CUX2O14529 1486 aa31.94■■■□□ 2.7
TRAF5-206ENST00000488428 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
TRAF5-206ENST00000488428 CADPSQ9ULU8 1353 aa31.8■■■□□ 2.68
TRAF5-206ENST00000488428 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.67
TRAF5-206ENST00000488428 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
TRAF5-206ENST00000488428 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
TRAF5-206ENST00000488428 DNAJC5Q9H3Z4 198 aa31.56■■■□□ 2.64
TRAF5-206ENST00000488428 CFTRP13569 1480 aa31.5■■■□□ 2.63
TRAF5-206ENST00000488428 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
TRAF5-206ENST00000488428 FANCD2Q9BXW9 1451 aa31.46■■■□□ 2.63
TRAF5-206ENST00000488428 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
TRAF5-206ENST00000488428 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
TRAF5-206ENST00000488428 WDR62O43379 1518 aa31.38■■■□□ 2.61
TRAF5-206ENST00000488428 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
TRAF5-206ENST00000488428 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
TRAF5-206ENST00000488428 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
TRAF5-206ENST00000488428 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
TRAF5-206ENST00000488428 DNMBPQ6XZF7 1577 aa30.8■■■□□ 2.52
TRAF5-206ENST00000488428 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
TRAF5-206ENST00000488428 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
TRAF5-206ENST00000488428 ZNF608Q9ULD9 1512 aaPredicted RBP30.77■■■□□ 2.52
TRAF5-206ENST00000488428 POLA1P09884 1462 aaPredicted RBP30.61■■■□□ 2.49
TRAF5-206ENST00000488428 TARBP1Q13395 1621 aaKnown RBP30.6■■■□□ 2.49
TRAF5-206ENST00000488428 OSCARQ8IYS5 282 aa30.6■■■□□ 2.49
TRAF5-206ENST00000488428 EIF4G3O43432 1585 aaKnown RBP30.58■■■□□ 2.49
TRAF5-206ENST00000488428 RAD54L2Q9Y4B4 1467 aa30.55■■■□□ 2.48
TRAF5-206ENST00000488428 AQRO60306 1485 aaKnown RBP eCLIP30.54■■■□□ 2.48
TRAF5-206ENST00000488428 CUX1P39880 1505 aa30.53■■■□□ 2.48
TRAF5-206ENST00000488428 SOGA1O94964 1423 aa30.49■■■□□ 2.47
TRAF5-206ENST00000488428 FGD5Q6ZNL6 1462 aa30.49■■■□□ 2.47
TRAF5-206ENST00000488428 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
TRAF5-206ENST00000488428 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
TRAF5-206ENST00000488428 CHD1O14646 1710 aa30.32■■■□□ 2.44
TRAF5-206ENST00000488428 FBLN2P98095 1184 aa30.3■■■□□ 2.44
TRAF5-206ENST00000488428 WDR97A6NE52 1622 aa30.23■■■□□ 2.43
TRAF5-206ENST00000488428 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
TRAF5-206ENST00000488428 RIMBP3CA6NJZ7 1639 aa30.19■■■□□ 2.42
TRAF5-206ENST00000488428 RIMBP3BA6NNM3 1639 aa30.19■■■□□ 2.42
TRAF5-206ENST00000488428 RIMBP3Q9UFD9 1639 aa30.19■■■□□ 2.42
TRAF5-206ENST00000488428 GRIN2BQ13224 1484 aa30.14■■■□□ 2.42
TRAF5-206ENST00000488428 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
TRAF5-206ENST00000488428 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
TRAF5-206ENST00000488428 ABCA10Q8WWZ4 1543 aa30.12■■■□□ 2.41
TRAF5-206ENST00000488428 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
TRAF5-206ENST00000488428 GAPVD1Q14C86 1478 aa30.11■■■□□ 2.41
TRAF5-206ENST00000488428 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
TRAF5-206ENST00000488428 BIVM-ERCC5R4GMW8 1640 aa30.1■■■□□ 2.41
TRAF5-206ENST00000488428 PBRM1Q86U86 1689 aa30.1■■■□□ 2.41
TRAF5-206ENST00000488428 MAGI1Q96QZ7 1491 aaPredicted RBP30.09■■■□□ 2.41
TRAF5-206ENST00000488428 CHMP7Q8WUX9 453 aaPredicted RBP30.08■■■□□ 2.41
TRAF5-206ENST00000488428 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
TRAF5-206ENST00000488428 SYNJ2O15056 1496 aa30■■■□□ 2.39
TRAF5-206ENST00000488428 CLASP1Q7Z460 1538 aa29.93■■■□□ 2.38
TRAF5-206ENST00000488428 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
TRAF5-206ENST00000488428 ARAP1Q96P48 1450 aa29.86■■■□□ 2.37
TRAF5-206ENST00000488428 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
TRAF5-206ENST00000488428 GRIN2AQ12879 1464 aa29.77■■■□□ 2.36
TRAF5-206ENST00000488428 ERICH3Q5RHP9 1530 aa29.74■■■□□ 2.35
TRAF5-206ENST00000488428 FHAD1B1AJZ9 1412 aa29.72■■■□□ 2.35
TRAF5-206ENST00000488428 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
TRAF5-206ENST00000488428 NUP160Q12769 1436 aa29.64■■■□□ 2.34
TRAF5-206ENST00000488428 ERCC6L2Q5T890 1561 aa29.57■■■□□ 2.32
TRAF5-206ENST00000488428 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
TRAF5-206ENST00000488428 IGF1RP08069 1367 aa29.5■■■□□ 2.31
TRAF5-206ENST00000488428 TRHP20396 242 aaPredicted RBP29.48■■■□□ 2.31
TRAF5-206ENST00000488428 SHROOM2Q13796 1616 aa29.47■■■□□ 2.31
TRAF5-206ENST00000488428 JPH4Q96JJ6 628 aa29.39■■■□□ 2.3
TRAF5-206ENST00000488428 CUL7Q14999 1698 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms