RNA–Protein interactions for RNA: ENST00000488419.1

CDK15-208, Transcript of cyclin dependent kinase 15, humanhuman

TSL 2

Gene CDK15, Length 1,828 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK15-208ENST00000488419 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
CDK15-208ENST00000488419 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
CDK15-208ENST00000488419 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
CDK15-208ENST00000488419 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
CDK15-208ENST00000488419 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
CDK15-208ENST00000488419 ABCC9O60706 1549 aa18.55■□□□□ 0.56
CDK15-208ENST00000488419 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
CDK15-208ENST00000488419 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
CDK15-208ENST00000488419 NACADO15069 1562 aa18.26■□□□□ 0.51
CDK15-208ENST00000488419 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
CDK15-208ENST00000488419 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
CDK15-208ENST00000488419 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
CDK15-208ENST00000488419 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
CDK15-208ENST00000488419 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
CDK15-208ENST00000488419 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDK15-208ENST00000488419 CECR2Q9BXF3 1484 aa17.46■□□□□ 0.39
CDK15-208ENST00000488419 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
CDK15-208ENST00000488419 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
CDK15-208ENST00000488419 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
CDK15-208ENST00000488419 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
CDK15-208ENST00000488419 WIZO95785 1651 aa17.24■□□□□ 0.35
CDK15-208ENST00000488419 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
CDK15-208ENST00000488419 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
CDK15-208ENST00000488419 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
CDK15-208ENST00000488419 SMARCA2P51531 1590 aa17■□□□□ 0.31
CDK15-208ENST00000488419 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
CDK15-208ENST00000488419 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
CDK15-208ENST00000488419 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
CDK15-208ENST00000488419 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
CDK15-208ENST00000488419 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
CDK15-208ENST00000488419 HMGXB3Q12766 1538 aa16.83■□□□□ 0.29
CDK15-208ENST00000488419 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
CDK15-208ENST00000488419 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
CDK15-208ENST00000488419 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
CDK15-208ENST00000488419 CFTRP13569 1480 aa16.47■□□□□ 0.23
CDK15-208ENST00000488419 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
CDK15-208ENST00000488419 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
CDK15-208ENST00000488419 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
CDK15-208ENST00000488419 SYNJ1O43426 1573 aa16.36■□□□□ 0.21
CDK15-208ENST00000488419 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
CDK15-208ENST00000488419 FAM9AQ8IZU1 332 aaPredicted RBP16.29■□□□□ 0.2
CDK15-208ENST00000488419 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
CDK15-208ENST00000488419 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
CDK15-208ENST00000488419 NESP48681 1621 aa16.28■□□□□ 0.2
CDK15-208ENST00000488419 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
CDK15-208ENST00000488419 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
CDK15-208ENST00000488419 CUX1P39880 1505 aa16.24■□□□□ 0.19
CDK15-208ENST00000488419 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
CDK15-208ENST00000488419 SOGA1O94964 1423 aa16.21■□□□□ 0.19
CDK15-208ENST00000488419 EEA1Q15075 1411 aa16.18■□□□□ 0.18
CDK15-208ENST00000488419 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
CDK15-208ENST00000488419 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
CDK15-208ENST00000488419 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
CDK15-208ENST00000488419 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
CDK15-208ENST00000488419 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
CDK15-208ENST00000488419 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
CDK15-208ENST00000488419 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
CDK15-208ENST00000488419 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
CDK15-208ENST00000488419 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
CDK15-208ENST00000488419 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
CDK15-208ENST00000488419 KIF27Q86VH2 1401 aa16■□□□□ 0.15
CDK15-208ENST00000488419 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
CDK15-208ENST00000488419 KIF21BO75037 1637 aa15.98■□□□□ 0.15
CDK15-208ENST00000488419 CUX2O14529 1486 aa15.96■□□□□ 0.15
CDK15-208ENST00000488419 GOLGA3Q08378 1498 aa15.96■□□□□ 0.15
CDK15-208ENST00000488419 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.14
CDK15-208ENST00000488419 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
CDK15-208ENST00000488419 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
CDK15-208ENST00000488419 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
CDK15-208ENST00000488419 TNIKQ9UKE5 1360 aa15.9■□□□□ 0.14
CDK15-208ENST00000488419 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
CDK15-208ENST00000488419 UBTFP17480 764 aaKnown RBP15.89■□□□□ 0.13
CDK15-208ENST00000488419 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
CDK15-208ENST00000488419 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
CDK15-208ENST00000488419 WDR62O43379 1518 aa15.86■□□□□ 0.13
CDK15-208ENST00000488419 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
CDK15-208ENST00000488419 IGF1RP08069 1367 aa15.85■□□□□ 0.13
CDK15-208ENST00000488419 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
CDK15-208ENST00000488419 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
CDK15-208ENST00000488419 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
CDK15-208ENST00000488419 ABCA5Q8WWZ7 1642 aa15.8■□□□□ 0.12
CDK15-208ENST00000488419 TDRD9Q8NDG6 1382 aaKnown RBP15.78■□□□□ 0.12
CDK15-208ENST00000488419 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
CDK15-208ENST00000488419 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
CDK15-208ENST00000488419 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
CDK15-208ENST00000488419 CUL7Q14999 1698 aa15.75■□□□□ 0.11
CDK15-208ENST00000488419 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
CDK15-208ENST00000488419 CLIP1P30622 1438 aa15.7■□□□□ 0.1
CDK15-208ENST00000488419 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDK15-208ENST00000488419 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
CDK15-208ENST00000488419 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
CDK15-208ENST00000488419 RANGAP1P46060 587 aaPredicted RBP15.64■□□□□ 0.09
CDK15-208ENST00000488419 EIF4G3O43432 1585 aaKnown RBP15.63■□□□□ 0.09
CDK15-208ENST00000488419 ADAMTS12P58397 1594 aa15.6■□□□□ 0.09
CDK15-208ENST00000488419 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
CDK15-208ENST00000488419 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
CDK15-208ENST00000488419 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
CDK15-208ENST00000488419 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
CDK15-208ENST00000488419 ARHGAP35Q9NRY4 1499 aa15.54■□□□□ 0.08
CDK15-208ENST00000488419 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms