RNA–Protein interactions for RNA: ENST00000488269.5

ARHGAP4-221, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 3

Gene ARHGAP4, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-221ENST00000488269 NISCHQ9Y2I1 1504 aa50.57■■■■■ 5.69
ARHGAP4-221ENST00000488269 CCDC180Q9P1Z9 1646 aa45.34■■■■■ 4.85
ARHGAP4-221ENST00000488269 ABCC9O60706 1549 aa44.98■■■■■ 4.79
ARHGAP4-221ENST00000488269 RB1CC1Q8TDY2 1594 aa42.99■■■■■ 4.47
ARHGAP4-221ENST00000488269 NACADO15069 1562 aa42.76■■■■■ 4.44
ARHGAP4-221ENST00000488269 DCAF8L2P0C7V8 631 aa42.45■■■■■ 4.39
ARHGAP4-221ENST00000488269 MYO15BQ96JP2 1530 aa42.26■■■■■ 4.36
ARHGAP4-221ENST00000488269 UNC13AQ9UPW8 1703 aa42.09■■■■■ 4.33
ARHGAP4-221ENST00000488269 ZCCHC6Q5VYS8 1495 aaKnown RBP41.98■■■■■ 4.31
ARHGAP4-221ENST00000488269 DNAJC5BQ9UF47 199 aa41.91■■■■■ 4.3
ARHGAP4-221ENST00000488269 PABPN1Q86U42 306 aaKnown RBP eCLIP41.87■■■■■ 4.29
ARHGAP4-221ENST00000488269 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
ARHGAP4-221ENST00000488269 BICRAQ9NZM4 1560 aa41.72■■■■■ 4.27
ARHGAP4-221ENST00000488269 SCRIBQ14160 1630 aa41.27■■■■■ 4.2
ARHGAP4-221ENST00000488269 SHROOM4Q9ULL8 1493 aa41.21■■■■■ 4.19
ARHGAP4-221ENST00000488269 CC2D2AQ9P2K1 1620 aa40.7■■■■■ 4.11
ARHGAP4-221ENST00000488269 EIF4G1Q04637 1599 aaKnown RBP40.67■■■■■ 4.1
ARHGAP4-221ENST00000488269 CECR2Q9BXF3 1484 aa40.51■■■■■ 4.07
ARHGAP4-221ENST00000488269 NCAPD3P42695 1498 aa39.43■■■■□ 3.9
ARHGAP4-221ENST00000488269 SMARCA4P51532 1647 aa39.42■■■■□ 3.9
ARHGAP4-221ENST00000488269 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
ARHGAP4-221ENST00000488269 SMARCA2P51531 1590 aa39.29■■■■□ 3.88
ARHGAP4-221ENST00000488269 BAZ1AQ9NRL2 1556 aaPredicted RBP39.25■■■■□ 3.87
ARHGAP4-221ENST00000488269 HMGXB3Q12766 1538 aa39.21■■■■□ 3.87
ARHGAP4-221ENST00000488269 PEG3Q9GZU2 1588 aa39.05■■■■□ 3.84
ARHGAP4-221ENST00000488269 BAZ1BQ9UIG0 1483 aaKnown RBP38.99■■■■□ 3.83
ARHGAP4-221ENST00000488269 MROH2BQ7Z745 1585 aa38.95■■■■□ 3.83
ARHGAP4-221ENST00000488269 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
ARHGAP4-221ENST00000488269 NESP48681 1621 aa38.72■■■■□ 3.79
ARHGAP4-221ENST00000488269 CUX2O14529 1486 aa38.7■■■■□ 3.79
ARHGAP4-221ENST00000488269 LAMC3Q9Y6N6 1575 aa38.54■■■■□ 3.76
ARHGAP4-221ENST00000488269 WIZO95785 1651 aa38.53■■■■□ 3.76
ARHGAP4-221ENST00000488269 THOC2Q8NI27 1593 aaKnown RBP38.34■■■■□ 3.73
ARHGAP4-221ENST00000488269 DNAJC5Q9H3Z4 198 aa38.32■■■■□ 3.72
ARHGAP4-221ENST00000488269 KIF21AQ7Z4S6 1674 aa38.31■■■■□ 3.72
ARHGAP4-221ENST00000488269 PDS5BQ9NTI5 1447 aa38.27■■■■□ 3.72
ARHGAP4-221ENST00000488269 CADPSQ9ULU8 1353 aa38.23■■■■□ 3.71
ARHGAP4-221ENST00000488269 RSF1Q96T23 1441 aaPredicted RBP38.22■■■■□ 3.71
ARHGAP4-221ENST00000488269 TOP2AP11388 1531 aaKnown RBP38.07■■■■□ 3.68
ARHGAP4-221ENST00000488269 MRC2Q9UBG0 1479 aa37.94■■■■□ 3.66
ARHGAP4-221ENST00000488269 CFTRP13569 1480 aa37.87■■■■□ 3.65
ARHGAP4-221ENST00000488269 WDR62O43379 1518 aa37.87■■■■□ 3.65
ARHGAP4-221ENST00000488269 CEP164Q9UPV0 1460 aa37.84■■■■□ 3.65
ARHGAP4-221ENST00000488269 FANCD2Q9BXW9 1451 aa37.82■■■■□ 3.64
ARHGAP4-221ENST00000488269 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
ARHGAP4-221ENST00000488269 CCDC88BA6NC98 1476 aa37.58■■■■□ 3.61
ARHGAP4-221ENST00000488269 URB2Q14146 1524 aaKnown RBP37.49■■■■□ 3.59
ARHGAP4-221ENST00000488269 TOPBP1Q92547 1522 aa37.14■■■■□ 3.54
ARHGAP4-221ENST00000488269 ABCC8Q09428 1581 aa37.08■■■■□ 3.53
ARHGAP4-221ENST00000488269 IFT140Q96RY7 1462 aa37.07■■■■□ 3.53
ARHGAP4-221ENST00000488269 DNMBPQ6XZF7 1577 aa37.05■■■■□ 3.52
ARHGAP4-221ENST00000488269 ZNF608Q9ULD9 1512 aaPredicted RBP36.97■■■■□ 3.51
ARHGAP4-221ENST00000488269 OSCARQ8IYS5 282 aa36.91■■■■□ 3.5
ARHGAP4-221ENST00000488269 EIF4G3O43432 1585 aaKnown RBP36.83■■■■□ 3.49
ARHGAP4-221ENST00000488269 TARBP1Q13395 1621 aaKnown RBP36.81■■■■□ 3.48
ARHGAP4-221ENST00000488269 POLA1P09884 1462 aaPredicted RBP36.77■■■■□ 3.48
ARHGAP4-221ENST00000488269 TRIM41Q8WV44 630 aa36.72■■■■□ 3.47
ARHGAP4-221ENST00000488269 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
ARHGAP4-221ENST00000488269 AQRO60306 1485 aaKnown RBP eCLIP36.65■■■■□ 3.468e-7■■■■□ 23
ARHGAP4-221ENST00000488269 RAD54L2Q9Y4B4 1467 aa36.61■■■■□ 3.45
ARHGAP4-221ENST00000488269 CUX1P39880 1505 aa36.59■■■■□ 3.45
ARHGAP4-221ENST00000488269 FGD5Q6ZNL6 1462 aa36.58■■■■□ 3.45
ARHGAP4-221ENST00000488269 SOGA1O94964 1423 aa36.58■■■■□ 3.45
ARHGAP4-221ENST00000488269 CHD1O14646 1710 aa36.54■■■■□ 3.44
ARHGAP4-221ENST00000488269 WDR97A6NE52 1622 aa36.49■■■■□ 3.43
ARHGAP4-221ENST00000488269 RIMBP3CA6NJZ7 1639 aa36.48■■■■□ 3.43
ARHGAP4-221ENST00000488269 RIMBP3BA6NNM3 1639 aa36.48■■■■□ 3.43
ARHGAP4-221ENST00000488269 RIMBP3Q9UFD9 1639 aa36.48■■■■□ 3.43
ARHGAP4-221ENST00000488269 TDRD9Q8NDG6 1382 aaKnown RBP36.45■■■■□ 3.43
ARHGAP4-221ENST00000488269 ARHGEF11O15085 1522 aa36.38■■■■□ 3.41
ARHGAP4-221ENST00000488269 FBLN2P98095 1184 aa36.32■■■■□ 3.4
ARHGAP4-221ENST00000488269 SNAPC4Q5SXM2 1469 aa36.31■■■■□ 3.4
ARHGAP4-221ENST00000488269 GRIN2BQ13224 1484 aa36.25■■■■□ 3.39
ARHGAP4-221ENST00000488269 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
ARHGAP4-221ENST00000488269 PBRM1Q86U86 1689 aa36.21■■■■□ 3.39
ARHGAP4-221ENST00000488269 ABCA10Q8WWZ4 1543 aa36.19■■■■□ 3.38
ARHGAP4-221ENST00000488269 GAPVD1Q14C86 1478 aa36.16■■■■□ 3.38
ARHGAP4-221ENST00000488269 ABCA5Q8WWZ7 1642 aa36.15■■■■□ 3.38
ARHGAP4-221ENST00000488269 BIVM-ERCC5R4GMW8 1640 aa36.12■■■■□ 3.37
ARHGAP4-221ENST00000488269 CHMP7Q8WUX9 453 aaPredicted RBP36.12■■■■□ 3.37
ARHGAP4-221ENST00000488269 SYNJ2O15056 1496 aa36.11■■■■□ 3.37
ARHGAP4-221ENST00000488269 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
ARHGAP4-221ENST00000488269 SYNJ1O43426 1573 aa36.1■■■■□ 3.37
ARHGAP4-221ENST00000488269 CLASP1Q7Z460 1538 aa36.09■■■■□ 3.37
ARHGAP4-221ENST00000488269 WRNQ14191 1432 aaPredicted RBP eCLIP36.07■■■■□ 3.36
ARHGAP4-221ENST00000488269 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
ARHGAP4-221ENST00000488269 CYB5RLQ6IPT4 315 aa36.02■■■■□ 3.36
ARHGAP4-221ENST00000488269 ADAMTS12P58397 1594 aa35.85■■■■□ 3.33
ARHGAP4-221ENST00000488269 GRIN2AQ12879 1464 aa35.8■■■■□ 3.32
ARHGAP4-221ENST00000488269 ERICH3Q5RHP9 1530 aa35.75■■■■□ 3.31
ARHGAP4-221ENST00000488269 FHAD1B1AJZ9 1412 aa35.71■■■■□ 3.31
ARHGAP4-221ENST00000488269 CEP170Q5SW79 1584 aa35.68■■■■□ 3.3
ARHGAP4-221ENST00000488269 NUP160Q12769 1436 aa35.67■■■■□ 3.3
ARHGAP4-221ENST00000488269 SHROOM2Q13796 1616 aa35.53■■■■□ 3.28
ARHGAP4-221ENST00000488269 ERCC6L2Q5T890 1561 aa35.52■■■■□ 3.28
ARHGAP4-221ENST00000488269 TRHP20396 242 aaPredicted RBP35.52■■■■□ 3.28
ARHGAP4-221ENST00000488269 KIF27Q86VH2 1401 aa35.36■■■■□ 3.25
ARHGAP4-221ENST00000488269 RUSC2Q8N2Y8 1516 aa35.34■■■■□ 3.25
ARHGAP4-221ENST00000488269 CUL7Q14999 1698 aa35.31■■■■□ 3.24
ARHGAP4-221ENST00000488269 IGF1RP08069 1367 aa35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms