RNA–Protein interactions for RNA: ENST00000488229.1

RPSAP4-201, Transcript of ribosomal protein SA pseudogene 4, humanhuman

BASIC

Gene RPSAP4, Length 888 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP4-201ENST00000488229 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
RPSAP4-201ENST00000488229 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
RPSAP4-201ENST00000488229 ABCC9O60706 1549 aa24.97■■□□□ 1.59
RPSAP4-201ENST00000488229 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
RPSAP4-201ENST00000488229 NACADO15069 1562 aa23.81■■□□□ 1.4
RPSAP4-201ENST00000488229 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
RPSAP4-201ENST00000488229 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
RPSAP4-201ENST00000488229 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
RPSAP4-201ENST00000488229 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
RPSAP4-201ENST00000488229 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
RPSAP4-201ENST00000488229 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
RPSAP4-201ENST00000488229 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
RPSAP4-201ENST00000488229 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
RPSAP4-201ENST00000488229 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
RPSAP4-201ENST00000488229 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
RPSAP4-201ENST00000488229 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
RPSAP4-201ENST00000488229 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
RPSAP4-201ENST00000488229 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
RPSAP4-201ENST00000488229 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
RPSAP4-201ENST00000488229 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
RPSAP4-201ENST00000488229 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
RPSAP4-201ENST00000488229 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
RPSAP4-201ENST00000488229 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
RPSAP4-201ENST00000488229 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
RPSAP4-201ENST00000488229 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
RPSAP4-201ENST00000488229 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
RPSAP4-201ENST00000488229 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
RPSAP4-201ENST00000488229 WIZO95785 1651 aa21.67■■□□□ 1.06
RPSAP4-201ENST00000488229 NESP48681 1621 aa21.62■■□□□ 1.05
RPSAP4-201ENST00000488229 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
RPSAP4-201ENST00000488229 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
RPSAP4-201ENST00000488229 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
RPSAP4-201ENST00000488229 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
RPSAP4-201ENST00000488229 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
RPSAP4-201ENST00000488229 CUX2O14529 1486 aa21.32■■□□□ 1
RPSAP4-201ENST00000488229 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
RPSAP4-201ENST00000488229 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
RPSAP4-201ENST00000488229 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
RPSAP4-201ENST00000488229 CFTRP13569 1480 aa21.2■□□□□ 0.98
RPSAP4-201ENST00000488229 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
RPSAP4-201ENST00000488229 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
RPSAP4-201ENST00000488229 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.97
RPSAP4-201ENST00000488229 WDR62O43379 1518 aa21.06■□□□□ 0.96
RPSAP4-201ENST00000488229 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
RPSAP4-201ENST00000488229 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
RPSAP4-201ENST00000488229 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
RPSAP4-201ENST00000488229 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
RPSAP4-201ENST00000488229 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
RPSAP4-201ENST00000488229 TOPBP1Q92547 1522 aa20.77■□□□□ 0.92
RPSAP4-201ENST00000488229 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
RPSAP4-201ENST00000488229 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
RPSAP4-201ENST00000488229 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
RPSAP4-201ENST00000488229 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
RPSAP4-201ENST00000488229 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
RPSAP4-201ENST00000488229 CUX1P39880 1505 aa20.58■□□□□ 0.88
RPSAP4-201ENST00000488229 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
RPSAP4-201ENST00000488229 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
RPSAP4-201ENST00000488229 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
RPSAP4-201ENST00000488229 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.87
RPSAP4-201ENST00000488229 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
RPSAP4-201ENST00000488229 SOGA1O94964 1423 aa20.45■□□□□ 0.86
RPSAP4-201ENST00000488229 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
RPSAP4-201ENST00000488229 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
RPSAP4-201ENST00000488229 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
RPSAP4-201ENST00000488229 SYNJ1O43426 1573 aa20.33■□□□□ 0.84
RPSAP4-201ENST00000488229 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
RPSAP4-201ENST00000488229 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
RPSAP4-201ENST00000488229 CHD1O14646 1710 aa20.29■□□□□ 0.84
RPSAP4-201ENST00000488229 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
RPSAP4-201ENST00000488229 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
RPSAP4-201ENST00000488229 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
RPSAP4-201ENST00000488229 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
RPSAP4-201ENST00000488229 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
RPSAP4-201ENST00000488229 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
RPSAP4-201ENST00000488229 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
RPSAP4-201ENST00000488229 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
RPSAP4-201ENST00000488229 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
RPSAP4-201ENST00000488229 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
RPSAP4-201ENST00000488229 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
RPSAP4-201ENST00000488229 FBLN2P98095 1184 aa20.16■□□□□ 0.82
RPSAP4-201ENST00000488229 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
RPSAP4-201ENST00000488229 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
RPSAP4-201ENST00000488229 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
RPSAP4-201ENST00000488229 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
RPSAP4-201ENST00000488229 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
RPSAP4-201ENST00000488229 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
RPSAP4-201ENST00000488229 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
RPSAP4-201ENST00000488229 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
RPSAP4-201ENST00000488229 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
RPSAP4-201ENST00000488229 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
RPSAP4-201ENST00000488229 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
RPSAP4-201ENST00000488229 NUP160Q12769 1436 aa19.93■□□□□ 0.78
RPSAP4-201ENST00000488229 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
RPSAP4-201ENST00000488229 IGF1RP08069 1367 aa19.89■□□□□ 0.77
RPSAP4-201ENST00000488229 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
RPSAP4-201ENST00000488229 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
RPSAP4-201ENST00000488229 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
RPSAP4-201ENST00000488229 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
RPSAP4-201ENST00000488229 CUL7Q14999 1698 aa19.75■□□□□ 0.75
RPSAP4-201ENST00000488229 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms