RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
TFAP2A-215ENST00000488193 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
TFAP2A-215ENST00000488193 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
TFAP2A-215ENST00000488193 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
TFAP2A-215ENST00000488193 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
TFAP2A-215ENST00000488193 ABCC9O60706 1549 aa27.01■■□□□ 1.91
TFAP2A-215ENST00000488193 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
TFAP2A-215ENST00000488193 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
TFAP2A-215ENST00000488193 NACADO15069 1562 aa26.59■■□□□ 1.85
TFAP2A-215ENST00000488193 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
TFAP2A-215ENST00000488193 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
TFAP2A-215ENST00000488193 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
TFAP2A-215ENST00000488193 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
TFAP2A-215ENST00000488193 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
TFAP2A-215ENST00000488193 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
TFAP2A-215ENST00000488193 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
TFAP2A-215ENST00000488193 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
TFAP2A-215ENST00000488193 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
TFAP2A-215ENST00000488193 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
TFAP2A-215ENST00000488193 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
TFAP2A-215ENST00000488193 WIZO95785 1651 aa25.19■■□□□ 1.62
TFAP2A-215ENST00000488193 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
TFAP2A-215ENST00000488193 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
TFAP2A-215ENST00000488193 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
TFAP2A-215ENST00000488193 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
TFAP2A-215ENST00000488193 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
TFAP2A-215ENST00000488193 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
TFAP2A-215ENST00000488193 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
TFAP2A-215ENST00000488193 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
TFAP2A-215ENST00000488193 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
TFAP2A-215ENST00000488193 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
TFAP2A-215ENST00000488193 CC2D2AQ9P2K1 1620 aa24.45■■□□□ 1.5
TFAP2A-215ENST00000488193 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
TFAP2A-215ENST00000488193 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
TFAP2A-215ENST00000488193 CFTRP13569 1480 aa24.05■■□□□ 1.44
TFAP2A-215ENST00000488193 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
TFAP2A-215ENST00000488193 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
TFAP2A-215ENST00000488193 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
TFAP2A-215ENST00000488193 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
TFAP2A-215ENST00000488193 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
TFAP2A-215ENST00000488193 LOC105371045A0A1W2PR82 267 aa23.85■■□□□ 1.41
TFAP2A-215ENST00000488193 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
TFAP2A-215ENST00000488193 TOP2BQ02880 1626 aa23.78■■□□□ 1.4
TFAP2A-215ENST00000488193 NESP48681 1621 aa23.77■■□□□ 1.4
TFAP2A-215ENST00000488193 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
TFAP2A-215ENST00000488193 SOGA1O94964 1423 aa23.74■■□□□ 1.39
TFAP2A-215ENST00000488193 CUX1P39880 1505 aa23.74■■□□□ 1.39
TFAP2A-215ENST00000488193 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
TFAP2A-215ENST00000488193 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
TFAP2A-215ENST00000488193 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
TFAP2A-215ENST00000488193 EEA1Q15075 1411 aa23.58■■□□□ 1.37
TFAP2A-215ENST00000488193 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
TFAP2A-215ENST00000488193 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
TFAP2A-215ENST00000488193 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
TFAP2A-215ENST00000488193 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
TFAP2A-215ENST00000488193 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
TFAP2A-215ENST00000488193 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
TFAP2A-215ENST00000488193 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
TFAP2A-215ENST00000488193 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
TFAP2A-215ENST00000488193 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
TFAP2A-215ENST00000488193 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
TFAP2A-215ENST00000488193 KIF21BO75037 1637 aa23.33■■□□□ 1.33
TFAP2A-215ENST00000488193 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
TFAP2A-215ENST00000488193 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
TFAP2A-215ENST00000488193 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
TFAP2A-215ENST00000488193 CUX2O14529 1486 aa23.28■■□□□ 1.32
TFAP2A-215ENST00000488193 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
TFAP2A-215ENST00000488193 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
TFAP2A-215ENST00000488193 ABCA10Q8WWZ4 1543 aa23.24■■□□□ 1.31
TFAP2A-215ENST00000488193 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
TFAP2A-215ENST00000488193 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
TFAP2A-215ENST00000488193 IGF1RP08069 1367 aa23.19■■□□□ 1.3
TFAP2A-215ENST00000488193 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
TFAP2A-215ENST00000488193 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
TFAP2A-215ENST00000488193 ERICH3Q5RHP9 1530 aa23.16■■□□□ 1.3
TFAP2A-215ENST00000488193 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
TFAP2A-215ENST00000488193 WDR62O43379 1518 aa23.12■■□□□ 1.29
TFAP2A-215ENST00000488193 TARBP1Q13395 1621 aaKnown RBP23.12■■□□□ 1.29
TFAP2A-215ENST00000488193 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
TFAP2A-215ENST00000488193 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
TFAP2A-215ENST00000488193 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
TFAP2A-215ENST00000488193 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
TFAP2A-215ENST00000488193 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
TFAP2A-215ENST00000488193 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
TFAP2A-215ENST00000488193 CLIP1P30622 1438 aa22.94■■□□□ 1.26
TFAP2A-215ENST00000488193 CUL7Q14999 1698 aa22.93■■□□□ 1.26
TFAP2A-215ENST00000488193 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
TFAP2A-215ENST00000488193 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.25
TFAP2A-215ENST00000488193 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
TFAP2A-215ENST00000488193 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
TFAP2A-215ENST00000488193 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
TFAP2A-215ENST00000488193 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
TFAP2A-215ENST00000488193 ARAP1Q96P48 1450 aa22.77■■□□□ 1.23
TFAP2A-215ENST00000488193 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
TFAP2A-215ENST00000488193 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
TFAP2A-215ENST00000488193 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
TFAP2A-215ENST00000488193 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
TFAP2A-215ENST00000488193 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
TFAP2A-215ENST00000488193 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
TFAP2A-215ENST00000488193 CTTNBP2Q8WZ74 1663 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms