RNA–Protein interactions for RNA: ENST00000488180.1

SP100-216, Transcript of SP100 nuclear antigen, humanhuman

TSL 2

Gene SP100, Length 3,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-216ENST00000488180 NISCHQ9Y2I1 1504 aa9.16□□□□□ -0.94
SP100-216ENST00000488180 CCDC180Q9P1Z9 1646 aa8.74□□□□□ -1.01
SP100-216ENST00000488180 MYO15BQ96JP2 1530 aa8.25□□□□□ -1.09
SP100-216ENST00000488180 DCAF1Q9Y4B6 1507 aa8.09□□□□□ -1.11
SP100-216ENST00000488180 CHIC1Q5VXU3 224 aa8.06□□□□□ -1.12
SP100-216ENST00000488180 AEBP2Q6ZN18 517 aaPredicted RBP8.05□□□□□ -1.12
SP100-216ENST00000488180 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
SP100-216ENST00000488180 POTEDQ86YR6 584 aa7.96□□□□□ -1.14
SP100-216ENST00000488180 NACADO15069 1562 aa7.92□□□□□ -1.14
SP100-216ENST00000488180 UNC13AQ9UPW8 1703 aa7.9□□□□□ -1.14
SP100-216ENST00000488180 RB1CC1Q8TDY2 1594 aa7.81□□□□□ -1.16
SP100-216ENST00000488180 ZCCHC6Q5VYS8 1495 aaKnown RBP7.76□□□□□ -1.17
SP100-216ENST00000488180 BICRAQ9NZM4 1560 aa7.66□□□□□ -1.18
SP100-216ENST00000488180 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
SP100-216ENST00000488180 PEG3Q9GZU2 1588 aa7.51□□□□□ -1.21
SP100-216ENST00000488180 ABCC9O60706 1549 aa7.43□□□□□ -1.22
SP100-216ENST00000488180 SMARCA2P51531 1590 aa7.41□□□□□ -1.22
SP100-216ENST00000488180 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
SP100-216ENST00000488180 HMGXB3Q12766 1538 aa7.34□□□□□ -1.23
SP100-216ENST00000488180 EIF4G1Q04637 1599 aaKnown RBP7.29□□□□□ -1.24
SP100-216ENST00000488180 SMARCA4P51532 1647 aa7.21□□□□□ -1.25
SP100-216ENST00000488180 CC2D2AQ9P2K1 1620 aa7.21□□□□□ -1.25
SP100-216ENST00000488180 WDR97A6NE52 1622 aa7.15□□□□□ -1.26
SP100-216ENST00000488180 NCAPD3P42695 1498 aa7.15□□□□□ -1.26
SP100-216ENST00000488180 SCRIBQ14160 1630 aa7.15□□□□□ -1.26
SP100-216ENST00000488180 BAZ1AQ9NRL2 1556 aaPredicted RBP7.14□□□□□ -1.27
SP100-216ENST00000488180 MSH5O43196 834 aa7.14□□□□□ -1.27
SP100-216ENST00000488180 LAMC3Q9Y6N6 1575 aa7.09□□□□□ -1.27
SP100-216ENST00000488180 THOC2Q8NI27 1593 aaKnown RBP7.09□□□□□ -1.27
SP100-216ENST00000488180 CUX2O14529 1486 aa7.01□□□□□ -1.29
SP100-216ENST00000488180 TOP2AP11388 1531 aaKnown RBP6.99□□□□□ -1.29
SP100-216ENST00000488180 PHF23Q9BUL5 403 aaPredicted RBP6.99□□□□□ -1.29
SP100-216ENST00000488180 ATAD2BQ9ULI0 1458 aa6.99□□□□□ -1.29
SP100-216ENST00000488180 WDR62O43379 1518 aa6.97□□□□□ -1.29
SP100-216ENST00000488180 KIF21AQ7Z4S6 1674 aa6.92□□□□□ -1.3
SP100-216ENST00000488180 CECR2Q9BXF3 1484 aa6.91□□□□□ -1.3
SP100-216ENST00000488180 BAZ1BQ9UIG0 1483 aaKnown RBP6.9□□□□□ -1.3
SP100-216ENST00000488180 MROH2BQ7Z745 1585 aa6.86□□□□□ -1.31
SP100-216ENST00000488180 BIVM-ERCC5R4GMW8 1640 aa6.85□□□□□ -1.31
SP100-216ENST00000488180 WIZO95785 1651 aa6.83□□□□□ -1.32
SP100-216ENST00000488180 CFTRP13569 1480 aa6.83□□□□□ -1.32
SP100-216ENST00000488180 TARBP1Q13395 1621 aaKnown RBP6.79□□□□□ -1.32
SP100-216ENST00000488180 ABCC8Q09428 1581 aa6.78□□□□□ -1.32
SP100-216ENST00000488180 DNMBPQ6XZF7 1577 aa6.76□□□□□ -1.33
SP100-216ENST00000488180 DNAJC5BQ9UF47 199 aa6.74□□□□□ -1.33
SP100-216ENST00000488180 ABCA5Q8WWZ7 1642 aa6.74□□□□□ -1.33
SP100-216ENST00000488180 FOXD1Q16676 465 aa6.74□□□□□ -1.33
SP100-216ENST00000488180 MRC2Q9UBG0 1479 aa6.74□□□□□ -1.33
SP100-216ENST00000488180 RSF1Q96T23 1441 aaPredicted RBP6.72□□□□□ -1.33
SP100-216ENST00000488180 SHROOM2Q13796 1616 aa6.72□□□□□ -1.33
SP100-216ENST00000488180 PBRM1Q86U86 1689 aa6.71□□□□□ -1.34
SP100-216ENST00000488180 CLASP1Q7Z460 1538 aa6.66□□□□□ -1.34
SP100-216ENST00000488180 TOP2BQ02880 1626 aa6.66□□□□□ -1.34
SP100-216ENST00000488180 PDS5BQ9NTI5 1447 aa6.65□□□□□ -1.35
SP100-216ENST00000488180 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.35
SP100-216ENST00000488180 NESP48681 1621 aa6.64□□□□□ -1.35
SP100-216ENST00000488180 EIF4G3O43432 1585 aaKnown RBP6.63□□□□□ -1.35
SP100-216ENST00000488180 URB2Q14146 1524 aaKnown RBP6.63□□□□□ -1.35
SP100-216ENST00000488180 IFT140Q96RY7 1462 aa6.62□□□□□ -1.35
SP100-216ENST00000488180 CEP164Q9UPV0 1460 aa6.61□□□□□ -1.35
SP100-216ENST00000488180 CUL7Q14999 1698 aa6.6□□□□□ -1.35
SP100-216ENST00000488180 CCDC88BA6NC98 1476 aa6.59□□□□□ -1.35
SP100-216ENST00000488180 CHD1O14646 1710 aa6.59□□□□□ -1.35
SP100-216ENST00000488180 TOPBP1Q92547 1522 aa6.58□□□□□ -1.36
SP100-216ENST00000488180 ERICH3Q5RHP9 1530 aa6.57□□□□□ -1.36
SP100-216ENST00000488180 FANCD2Q9BXW9 1451 aa6.57□□□□□ -1.36
SP100-216ENST00000488180 ABCA10Q8WWZ4 1543 aa6.57□□□□□ -1.36
SP100-216ENST00000488180 ADAMTS12P58397 1594 aa6.57□□□□□ -1.36
SP100-216ENST00000488180 MAGI1Q96QZ7 1491 aaPredicted RBP6.54□□□□□ -1.36
SP100-216ENST00000488180 PABPN1Q86U42 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
SP100-216ENST00000488180 CUX1P39880 1505 aa6.52□□□□□ -1.37
SP100-216ENST00000488180 RUSC2Q8N2Y8 1516 aa6.5□□□□□ -1.37
SP100-216ENST00000488180 CTTNBP2Q8WZ74 1663 aa6.48□□□□□ -1.37
SP100-216ENST00000488180 POLA1P09884 1462 aaPredicted RBP6.46□□□□□ -1.38
SP100-216ENST00000488180 SYNJ1O43426 1573 aa6.46□□□□□ -1.38
SP100-216ENST00000488180 RIMBP3CA6NJZ7 1639 aa6.45□□□□□ -1.38
SP100-216ENST00000488180 RIMBP3BA6NNM3 1639 aa6.45□□□□□ -1.38
SP100-216ENST00000488180 RIMBP3Q9UFD9 1639 aa6.45□□□□□ -1.38
SP100-216ENST00000488180 NUP160Q12769 1436 aa6.44□□□□□ -1.38
SP100-216ENST00000488180 DNAJC5Q9H3Z4 198 aa6.43□□□□□ -1.38
SP100-216ENST00000488180 GLI2P10070 1586 aa6.41□□□□□ -1.38
SP100-216ENST00000488180 ERCC6Q03468 1493 aa6.41□□□□□ -1.38
SP100-216ENST00000488180 SYNJ2O15056 1496 aa6.4□□□□□ -1.39
SP100-216ENST00000488180 MAPKBP1O60336 1514 aa6.39□□□□□ -1.39
SP100-216ENST00000488180 KIF13AQ9H1H9 1805 aa6.39□□□□□ -1.39
SP100-216ENST00000488180 CEP170Q5SW79 1584 aa6.39□□□□□ -1.39
SP100-216ENST00000488180 SAMD9Q5K651 1589 aa6.39□□□□□ -1.39
SP100-216ENST00000488180 GRIN2BQ13224 1484 aa6.38□□□□□ -1.39
SP100-216ENST00000488180 FGD5Q6ZNL6 1462 aa6.37□□□□□ -1.39
SP100-216ENST00000488180 UHRF1BP1LA0JNW5 1464 aa6.37□□□□□ -1.39
SP100-216ENST00000488180 UGGT2Q9NYU1 1516 aa6.36□□□□□ -1.39
SP100-216ENST00000488180 KDM5BQ9UGL1 1544 aa6.36□□□□□ -1.39
SP100-216ENST00000488180 KIF21BO75037 1637 aa6.36□□□□□ -1.39
SP100-216ENST00000488180 PPRC1Q5VV67 1664 aaKnown RBP6.35□□□□□ -1.39
SP100-216ENST00000488180 MAP3K4Q9Y6R4 1608 aa6.34□□□□□ -1.4
SP100-216ENST00000488180 GRIN2AQ12879 1464 aa6.31□□□□□ -1.4
SP100-216ENST00000488180 ADCY10Q96PN6 1610 aa6.31□□□□□ -1.4
SP100-216ENST00000488180 BCORL1Q5H9F3 1711 aa6.3□□□□□ -1.4
SP100-216ENST00000488180 ARHGEF11O15085 1522 aa6.3□□□□□ -1.4
SP100-216ENST00000488180 FHAD1B1AJZ9 1412 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms