RNA–Protein interactions for RNA: ENST00000488154.5

EPHB1-209, Transcript of EPH receptor B1, humanhuman

TSL 1 (best)

Gene EPHB1, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB1-209ENST00000488154 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
EPHB1-209ENST00000488154 ABCC9O60706 1549 aa18.37■□□□□ 0.53
EPHB1-209ENST00000488154 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
EPHB1-209ENST00000488154 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
EPHB1-209ENST00000488154 NACADO15069 1562 aa17.37■□□□□ 0.37
EPHB1-209ENST00000488154 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
EPHB1-209ENST00000488154 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
EPHB1-209ENST00000488154 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
EPHB1-209ENST00000488154 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
EPHB1-209ENST00000488154 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
EPHB1-209ENST00000488154 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
EPHB1-209ENST00000488154 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
EPHB1-209ENST00000488154 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
EPHB1-209ENST00000488154 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
EPHB1-209ENST00000488154 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
EPHB1-209ENST00000488154 CC2D2AQ9P2K1 1620 aa16.6■□□□□ 0.25
EPHB1-209ENST00000488154 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
EPHB1-209ENST00000488154 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
EPHB1-209ENST00000488154 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
EPHB1-209ENST00000488154 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.14
EPHB1-209ENST00000488154 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
EPHB1-209ENST00000488154 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
EPHB1-209ENST00000488154 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
EPHB1-209ENST00000488154 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
EPHB1-209ENST00000488154 CUX2O14529 1486 aa15.91■□□□□ 0.14
EPHB1-209ENST00000488154 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
EPHB1-209ENST00000488154 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
EPHB1-209ENST00000488154 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
EPHB1-209ENST00000488154 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
EPHB1-209ENST00000488154 NESP48681 1621 aa15.75■□□□□ 0.11
EPHB1-209ENST00000488154 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
EPHB1-209ENST00000488154 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
EPHB1-209ENST00000488154 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
EPHB1-209ENST00000488154 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
EPHB1-209ENST00000488154 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
EPHB1-209ENST00000488154 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
EPHB1-209ENST00000488154 WIZO95785 1651 aa15.5■□□□□ 0.07
EPHB1-209ENST00000488154 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
EPHB1-209ENST00000488154 WDR62O43379 1518 aa15.41■□□□□ 0.06
EPHB1-209ENST00000488154 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
EPHB1-209ENST00000488154 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
EPHB1-209ENST00000488154 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
EPHB1-209ENST00000488154 CFTRP13569 1480 aa15.34■□□□□ 0.05
EPHB1-209ENST00000488154 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
EPHB1-209ENST00000488154 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
EPHB1-209ENST00000488154 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
EPHB1-209ENST00000488154 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
EPHB1-209ENST00000488154 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
EPHB1-209ENST00000488154 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
EPHB1-209ENST00000488154 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
EPHB1-209ENST00000488154 ABCC8Q09428 1581 aa15.07■□□□□ 0
EPHB1-209ENST00000488154 TOPBP1Q92547 1522 aa15.05■□□□□ -0
EPHB1-209ENST00000488154 ZNF608Q9ULD9 1512 aaPredicted RBP15.02■□□□□ -0
EPHB1-209ENST00000488154 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
EPHB1-209ENST00000488154 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
EPHB1-209ENST00000488154 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
EPHB1-209ENST00000488154 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
EPHB1-209ENST00000488154 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
EPHB1-209ENST00000488154 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
EPHB1-209ENST00000488154 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
EPHB1-209ENST00000488154 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
EPHB1-209ENST00000488154 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
EPHB1-209ENST00000488154 CHD1O14646 1710 aa14.85□□□□□ -0.03
EPHB1-209ENST00000488154 FBLN2P98095 1184 aa14.84□□□□□ -0.03
EPHB1-209ENST00000488154 SOGA1O94964 1423 aa14.83□□□□□ -0.03
EPHB1-209ENST00000488154 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
EPHB1-209ENST00000488154 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
EPHB1-209ENST00000488154 CYB5RLQ6IPT4 315 aa14.81□□□□□ -0.04
EPHB1-209ENST00000488154 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
EPHB1-209ENST00000488154 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
EPHB1-209ENST00000488154 CUX1P39880 1505 aa14.75□□□□□ -0.05
EPHB1-209ENST00000488154 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
EPHB1-209ENST00000488154 CHMP7Q8WUX9 453 aaPredicted RBP14.74□□□□□ -0.05
EPHB1-209ENST00000488154 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
EPHB1-209ENST00000488154 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
EPHB1-209ENST00000488154 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
EPHB1-209ENST00000488154 SYNJ1O43426 1573 aa14.71□□□□□ -0.05
EPHB1-209ENST00000488154 CLASP1Q7Z460 1538 aa14.68□□□□□ -0.06
EPHB1-209ENST00000488154 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
EPHB1-209ENST00000488154 SYNJ2O15056 1496 aa14.68□□□□□ -0.06
EPHB1-209ENST00000488154 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
EPHB1-209ENST00000488154 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
EPHB1-209ENST00000488154 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
EPHB1-209ENST00000488154 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
EPHB1-209ENST00000488154 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
EPHB1-209ENST00000488154 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.07
EPHB1-209ENST00000488154 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
EPHB1-209ENST00000488154 TOP2BQ02880 1626 aa14.52□□□□□ -0.09
EPHB1-209ENST00000488154 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
EPHB1-209ENST00000488154 ADAMTS12P58397 1594 aa14.5□□□□□ -0.09
EPHB1-209ENST00000488154 FHAD1B1AJZ9 1412 aa14.48□□□□□ -0.09
EPHB1-209ENST00000488154 NUP160Q12769 1436 aa14.48□□□□□ -0.09
EPHB1-209ENST00000488154 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
EPHB1-209ENST00000488154 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
EPHB1-209ENST00000488154 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
EPHB1-209ENST00000488154 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
EPHB1-209ENST00000488154 PRG4Q92954 1404 aaPredicted RBP14.34□□□□□ -0.11
EPHB1-209ENST00000488154 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
EPHB1-209ENST00000488154 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
EPHB1-209ENST00000488154 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms