RNA–Protein interactions for RNA: ENST00000488145.1

NPDC1-205, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-205ENST00000488145 NISCHQ9Y2I1 1504 aa44.08■■■■■ 4.65
NPDC1-205ENST00000488145 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
NPDC1-205ENST00000488145 ABCC9O60706 1549 aa38.38■■■■□ 3.74
NPDC1-205ENST00000488145 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
NPDC1-205ENST00000488145 NACADO15069 1562 aa36.88■■■■□ 3.49
NPDC1-205ENST00000488145 DCAF8L2P0C7V8 631 aa36.83■■■■□ 3.49
NPDC1-205ENST00000488145 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
NPDC1-205ENST00000488145 MYO15BQ96JP2 1530 aa36.63■■■■□ 3.45
NPDC1-205ENST00000488145 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
NPDC1-205ENST00000488145 UNC13AQ9UPW8 1703 aa36.19■■■■□ 3.38
NPDC1-205ENST00000488145 DNAJC5BQ9UF47 199 aa35.96■■■■□ 3.35
NPDC1-205ENST00000488145 PABPN1Q86U42 306 aaKnown RBP eCLIP35.83■■■■□ 3.33
NPDC1-205ENST00000488145 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
NPDC1-205ENST00000488145 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
NPDC1-205ENST00000488145 SHROOM4Q9ULL8 1493 aa35.43■■■■□ 3.26
NPDC1-205ENST00000488145 EIF4G1Q04637 1599 aaKnown RBP34.87■■■■□ 3.17
NPDC1-205ENST00000488145 CC2D2AQ9P2K1 1620 aa34.75■■■■□ 3.15
NPDC1-205ENST00000488145 CECR2Q9BXF3 1484 aa34.49■■■■□ 3.11
NPDC1-205ENST00000488145 SMARCA4P51532 1647 aa34.24■■■■□ 3.07
NPDC1-205ENST00000488145 BAZ1AQ9NRL2 1556 aaPredicted RBP34.19■■■■□ 3.06
NPDC1-205ENST00000488145 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
NPDC1-205ENST00000488145 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.04
NPDC1-205ENST00000488145 NCAPD3P42695 1498 aa33.99■■■■□ 3.03
NPDC1-205ENST00000488145 MROH2BQ7Z745 1585 aa33.97■■■■□ 3.03
NPDC1-205ENST00000488145 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
NPDC1-205ENST00000488145 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
NPDC1-205ENST00000488145 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■■□ 3
NPDC1-205ENST00000488145 WIZO95785 1651 aa33.64■■■□□ 2.98
NPDC1-205ENST00000488145 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
NPDC1-205ENST00000488145 TOP2AP11388 1531 aaKnown RBP33.27■■■□□ 2.92
NPDC1-205ENST00000488145 NESP48681 1621 aa33.2■■■□□ 2.91
NPDC1-205ENST00000488145 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
NPDC1-205ENST00000488145 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
NPDC1-205ENST00000488145 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
NPDC1-205ENST00000488145 DNAJC5Q9H3Z4 198 aa32.96■■■□□ 2.87
NPDC1-205ENST00000488145 PDS5BQ9NTI5 1447 aa32.9■■■□□ 2.86
NPDC1-205ENST00000488145 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
NPDC1-205ENST00000488145 CUX2O14529 1486 aa32.86■■■□□ 2.85
NPDC1-205ENST00000488145 CCDC88BA6NC98 1476 aa32.85■■■□□ 2.85
NPDC1-205ENST00000488145 CFTRP13569 1480 aa32.8■■■□□ 2.84
NPDC1-205ENST00000488145 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
NPDC1-205ENST00000488145 PRDM2Q13029 1718 aa32.71■■■□□ 2.83
NPDC1-205ENST00000488145 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
NPDC1-205ENST00000488145 FANCD2Q9BXW9 1451 aa32.65■■■□□ 2.82
NPDC1-205ENST00000488145 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
NPDC1-205ENST00000488145 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
NPDC1-205ENST00000488145 WDR62O43379 1518 aa32.47■■■□□ 2.79
NPDC1-205ENST00000488145 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
NPDC1-205ENST00000488145 ABCC8Q09428 1581 aa32.14■■■□□ 2.74
NPDC1-205ENST00000488145 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
NPDC1-205ENST00000488145 DNMBPQ6XZF7 1577 aa32.11■■■□□ 2.73
NPDC1-205ENST00000488145 IFT140Q96RY7 1462 aa31.93■■■□□ 2.7
NPDC1-205ENST00000488145 CUX1P39880 1505 aa31.88■■■□□ 2.69
NPDC1-205ENST00000488145 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
NPDC1-205ENST00000488145 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
NPDC1-205ENST00000488145 FGD5Q6ZNL6 1462 aa31.78■■■□□ 2.68
NPDC1-205ENST00000488145 ZNF608Q9ULD9 1512 aaPredicted RBP31.77■■■□□ 2.68
NPDC1-205ENST00000488145 SOGA1O94964 1423 aa31.71■■■□□ 2.67
NPDC1-205ENST00000488145 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
NPDC1-205ENST00000488145 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.66
NPDC1-205ENST00000488145 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
NPDC1-205ENST00000488145 BIVM-ERCC5R4GMW8 1640 aa31.64■■■□□ 2.65
NPDC1-205ENST00000488145 TOP2BQ02880 1626 aa31.62■■■□□ 2.65
NPDC1-205ENST00000488145 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
NPDC1-205ENST00000488145 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.651e-7■■■■□ 26.4
NPDC1-205ENST00000488145 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
NPDC1-205ENST00000488145 TDRD9Q8NDG6 1382 aaKnown RBP31.53■■■□□ 2.64
NPDC1-205ENST00000488145 ABCA10Q8WWZ4 1543 aa31.46■■■□□ 2.63
NPDC1-205ENST00000488145 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
NPDC1-205ENST00000488145 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
NPDC1-205ENST00000488145 ABCA5Q8WWZ7 1642 aa31.37■■■□□ 2.61
NPDC1-205ENST00000488145 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
NPDC1-205ENST00000488145 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
NPDC1-205ENST00000488145 CHD1O14646 1710 aa31.35■■■□□ 2.61
NPDC1-205ENST00000488145 GAPVD1Q14C86 1478 aa31.35■■■□□ 2.61
NPDC1-205ENST00000488145 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
NPDC1-205ENST00000488145 MAGI1Q96QZ7 1491 aaPredicted RBP31.28■■■□□ 2.6
NPDC1-205ENST00000488145 FBLN2P98095 1184 aa31.24■■■□□ 2.59
NPDC1-205ENST00000488145 SYNJ2O15056 1496 aa31.16■■■□□ 2.58
NPDC1-205ENST00000488145 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
NPDC1-205ENST00000488145 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
NPDC1-205ENST00000488145 ADAMTS12P58397 1594 aa31.08■■■□□ 2.57
NPDC1-205ENST00000488145 KIF27Q86VH2 1401 aa31■■■□□ 2.55
NPDC1-205ENST00000488145 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
NPDC1-205ENST00000488145 RIMBP3CA6NJZ7 1639 aa30.98■■■□□ 2.55
NPDC1-205ENST00000488145 RIMBP3BA6NNM3 1639 aa30.98■■■□□ 2.55
NPDC1-205ENST00000488145 RIMBP3Q9UFD9 1639 aa30.98■■■□□ 2.55
NPDC1-205ENST00000488145 GRIN2AQ12879 1464 aa30.95■■■□□ 2.55
NPDC1-205ENST00000488145 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
NPDC1-205ENST00000488145 ARHGEF11O15085 1522 aa30.89■■■□□ 2.54
NPDC1-205ENST00000488145 CUL7Q14999 1698 aa30.86■■■□□ 2.53
NPDC1-205ENST00000488145 IGF1RP08069 1367 aa30.84■■■□□ 2.53
NPDC1-205ENST00000488145 CEP170Q5SW79 1584 aa30.82■■■□□ 2.52
NPDC1-205ENST00000488145 NUP160Q12769 1436 aa30.8■■■□□ 2.52
NPDC1-205ENST00000488145 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
NPDC1-205ENST00000488145 CARMIL1Q5VZK9 1371 aa30.67■■■□□ 2.5
NPDC1-205ENST00000488145 CYB5RLQ6IPT4 315 aa30.64■■■□□ 2.5
NPDC1-205ENST00000488145 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
NPDC1-205ENST00000488145 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
NPDC1-205ENST00000488145 RAPGEF2Q9Y4G8 1499 aa30.51■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms