RNA–Protein interactions for RNA: ENST00000488122.2

RPLP1-204, Transcript of ribosomal protein lateral stalk subunit P1, humanhuman

TSL 2

Gene RPLP1, Length 940 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP1-204ENST00000488122 NISCHQ9Y2I1 1504 aa50.77■■■■■ 5.72
RPLP1-204ENST00000488122 CCDC180Q9P1Z9 1646 aa45.19■■■■■ 4.82
RPLP1-204ENST00000488122 ABCC9O60706 1549 aa44.35■■■■■ 4.69
RPLP1-204ENST00000488122 RB1CC1Q8TDY2 1594 aa42.56■■■■■ 4.4
RPLP1-204ENST00000488122 DCAF8L2P0C7V8 631 aa42.55■■■■■ 4.4
RPLP1-204ENST00000488122 NACADO15069 1562 aa42.46■■■■■ 4.39
RPLP1-204ENST00000488122 ZCCHC6Q5VYS8 1495 aaKnown RBP42.29■■■■■ 4.36
RPLP1-204ENST00000488122 MYO15BQ96JP2 1530 aa42.1■■■■■ 4.33
RPLP1-204ENST00000488122 DCAF1Q9Y4B6 1507 aa41.93■■■■■ 4.3
RPLP1-204ENST00000488122 UNC13AQ9UPW8 1703 aa41.69■■■■■ 4.26
RPLP1-204ENST00000488122 PABPN1Q86U42 306 aaKnown RBP eCLIP41.42■■■■■ 4.22
RPLP1-204ENST00000488122 SCRIBQ14160 1630 aa41.34■■■■■ 4.21
RPLP1-204ENST00000488122 BICRAQ9NZM4 1560 aa41.29■■■■■ 4.2
RPLP1-204ENST00000488122 SHROOM4Q9ULL8 1493 aa40.75■■■■■ 4.11
RPLP1-204ENST00000488122 DNAJC5BQ9UF47 199 aa40.68■■■■■ 4.1
RPLP1-204ENST00000488122 EIF4G1Q04637 1599 aaKnown RBP40.22■■■■■ 4.03
RPLP1-204ENST00000488122 CC2D2AQ9P2K1 1620 aa40.09■■■■■ 4.01
RPLP1-204ENST00000488122 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
RPLP1-204ENST00000488122 SMARCA4P51532 1647 aa39.46■■■■□ 3.91
RPLP1-204ENST00000488122 BAZ1AQ9NRL2 1556 aaPredicted RBP39.37■■■■□ 3.89
RPLP1-204ENST00000488122 ATAD2BQ9ULI0 1458 aa39.21■■■■□ 3.87
RPLP1-204ENST00000488122 SMARCA2P51531 1590 aa39.16■■■■□ 3.86
RPLP1-204ENST00000488122 MROH2BQ7Z745 1585 aa39.16■■■■□ 3.86
RPLP1-204ENST00000488122 NCAPD3P42695 1498 aa39.14■■■■□ 3.86
RPLP1-204ENST00000488122 HMGXB3Q12766 1538 aa39■■■■□ 3.83
RPLP1-204ENST00000488122 PEG3Q9GZU2 1588 aa38.99■■■■□ 3.83
RPLP1-204ENST00000488122 BAZ1BQ9UIG0 1483 aaKnown RBP38.93■■■■□ 3.82
RPLP1-204ENST00000488122 WIZO95785 1651 aa38.79■■■■□ 3.8
RPLP1-204ENST00000488122 RSF1Q96T23 1441 aaPredicted RBP38.65■■■■□ 3.78
RPLP1-204ENST00000488122 NESP48681 1621 aa38.36■■■■□ 3.73
RPLP1-204ENST00000488122 TOP2AP11388 1531 aaKnown RBP38.33■■■■□ 3.73
RPLP1-204ENST00000488122 ERCC6Q03468 1493 aa38.24■■■■□ 3.71
RPLP1-204ENST00000488122 LAMC3Q9Y6N6 1575 aa38.19■■■■□ 3.7
RPLP1-204ENST00000488122 CADPSQ9ULU8 1353 aa38.03■■■■□ 3.68
RPLP1-204ENST00000488122 KIF21AQ7Z4S6 1674 aa37.94■■■■□ 3.66
RPLP1-204ENST00000488122 PDS5BQ9NTI5 1447 aa37.91■■■■□ 3.66
RPLP1-204ENST00000488122 CCDC88BA6NC98 1476 aa37.85■■■■□ 3.65
RPLP1-204ENST00000488122 CFTRP13569 1480 aa37.78■■■■□ 3.64
RPLP1-204ENST00000488122 THOC2Q8NI27 1593 aaKnown RBP37.78■■■■□ 3.64
RPLP1-204ENST00000488122 CUX2O14529 1486 aa37.76■■■■□ 3.63
RPLP1-204ENST00000488122 SUPT5HO00267 1087 aaKnown RBP37.73■■■■□ 3.63
RPLP1-204ENST00000488122 FANCD2Q9BXW9 1451 aa37.65■■■■□ 3.62
RPLP1-204ENST00000488122 CEP164Q9UPV0 1460 aa37.62■■■■□ 3.61
RPLP1-204ENST00000488122 PRDM2Q13029 1718 aa37.61■■■■□ 3.61
RPLP1-204ENST00000488122 MRC2Q9UBG0 1479 aa37.57■■■■□ 3.6
RPLP1-204ENST00000488122 WDR62O43379 1518 aa37.43■■■■□ 3.58
RPLP1-204ENST00000488122 URB2Q14146 1524 aaKnown RBP37.29■■■■□ 3.56
RPLP1-204ENST00000488122 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
RPLP1-204ENST00000488122 DNMBPQ6XZF7 1577 aa37■■■■□ 3.51
RPLP1-204ENST00000488122 ABCC8Q09428 1581 aa36.95■■■■□ 3.51
RPLP1-204ENST00000488122 IFT140Q96RY7 1462 aa36.8■■■■□ 3.48
RPLP1-204ENST00000488122 CUX1P39880 1505 aa36.75■■■■□ 3.47
RPLP1-204ENST00000488122 POLA1P09884 1462 aaPredicted RBP36.72■■■■□ 3.47
RPLP1-204ENST00000488122 ZNF608Q9ULD9 1512 aaPredicted RBP36.69■■■■□ 3.46
RPLP1-204ENST00000488122 FGD5Q6ZNL6 1462 aa36.65■■■■□ 3.46
RPLP1-204ENST00000488122 TARBP1Q13395 1621 aaKnown RBP36.64■■■■□ 3.46
RPLP1-204ENST00000488122 DNAJC5Q9H3Z4 198 aa36.64■■■■□ 3.46
RPLP1-204ENST00000488122 RAD54L2Q9Y4B4 1467 aa36.6■■■■□ 3.45
RPLP1-204ENST00000488122 EIF4G3O43432 1585 aaKnown RBP36.57■■■■□ 3.45
RPLP1-204ENST00000488122 SOGA1O94964 1423 aa36.55■■■■□ 3.44
RPLP1-204ENST00000488122 WRNQ14191 1432 aaPredicted RBP eCLIP36.48■■■■□ 3.43
RPLP1-204ENST00000488122 AQRO60306 1485 aaKnown RBP eCLIP36.46■■■■□ 3.434e-7■■■□□ 18.8
RPLP1-204ENST00000488122 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
RPLP1-204ENST00000488122 BIVM-ERCC5R4GMW8 1640 aa36.41■■■■□ 3.42
RPLP1-204ENST00000488122 TOP2BQ02880 1626 aa36.41■■■■□ 3.42
RPLP1-204ENST00000488122 TDRD9Q8NDG6 1382 aaKnown RBP36.39■■■■□ 3.42
RPLP1-204ENST00000488122 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
RPLP1-204ENST00000488122 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
RPLP1-204ENST00000488122 OSCARQ8IYS5 282 aa36.17■■■■□ 3.38
RPLP1-204ENST00000488122 CHD1O14646 1710 aa36.16■■■■□ 3.38
RPLP1-204ENST00000488122 PBRM1Q86U86 1689 aa36.16■■■■□ 3.38
RPLP1-204ENST00000488122 SNAPC4Q5SXM2 1469 aa36.15■■■■□ 3.38
RPLP1-204ENST00000488122 GAPVD1Q14C86 1478 aa36.14■■■■□ 3.38
RPLP1-204ENST00000488122 ABCA5Q8WWZ7 1642 aa36.14■■■■□ 3.38
RPLP1-204ENST00000488122 GRIN2BQ13224 1484 aa36.13■■■■□ 3.37
RPLP1-204ENST00000488122 FBLN2P98095 1184 aa36.09■■■■□ 3.37
RPLP1-204ENST00000488122 MAGI1Q96QZ7 1491 aaPredicted RBP36.04■■■■□ 3.36
RPLP1-204ENST00000488122 CHMP7Q8WUX9 453 aaPredicted RBP35.91■■■■□ 3.34
RPLP1-204ENST00000488122 SYNJ2O15056 1496 aa35.91■■■■□ 3.34
RPLP1-204ENST00000488122 ADAMTS12P58397 1594 aa35.83■■■■□ 3.33
RPLP1-204ENST00000488122 ERICH3Q5RHP9 1530 aa35.8■■■■□ 3.32
RPLP1-204ENST00000488122 RIMBP3CA6NJZ7 1639 aa35.7■■■■□ 3.31
RPLP1-204ENST00000488122 RIMBP3BA6NNM3 1639 aa35.7■■■■□ 3.31
RPLP1-204ENST00000488122 FHAD1B1AJZ9 1412 aa35.7■■■■□ 3.31
RPLP1-204ENST00000488122 KIF27Q86VH2 1401 aa35.7■■■■□ 3.31
RPLP1-204ENST00000488122 RIMBP3Q9UFD9 1639 aa35.7■■■■□ 3.31
RPLP1-204ENST00000488122 GRIN2AQ12879 1464 aa35.69■■■■□ 3.3
RPLP1-204ENST00000488122 CLASP1Q7Z460 1538 aa35.67■■■■□ 3.3
RPLP1-204ENST00000488122 ARHGEF11O15085 1522 aa35.66■■■■□ 3.3
RPLP1-204ENST00000488122 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
RPLP1-204ENST00000488122 CEP170Q5SW79 1584 aa35.55■■■■□ 3.28
RPLP1-204ENST00000488122 IGF1RP08069 1367 aa35.52■■■■□ 3.28
RPLP1-204ENST00000488122 CUL7Q14999 1698 aa35.51■■■■□ 3.28
RPLP1-204ENST00000488122 NUP160Q12769 1436 aa35.49■■■■□ 3.27
RPLP1-204ENST00000488122 RUSC2Q8N2Y8 1516 aa35.42■■■■□ 3.26
RPLP1-204ENST00000488122 ARAP1Q96P48 1450 aa35.37■■■■□ 3.25
RPLP1-204ENST00000488122 CARMIL1Q5VZK9 1371 aa35.35■■■■□ 3.25
RPLP1-204ENST00000488122 CYB5RLQ6IPT4 315 aa35.32■■■■□ 3.24
RPLP1-204ENST00000488122 SHROOM2Q13796 1616 aa35.26■■■■□ 3.24
RPLP1-204ENST00000488122 ERCC6L2Q5T890 1561 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms