RNA–Protein interactions for RNA: ENST00000488113.5

ZNF542P-205, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 1 (best)

Gene ZNF542P, Length 1,989 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-205ENST00000488113 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
ZNF542P-205ENST00000488113 ABCC9O60706 1549 aa24.73■■□□□ 1.55
ZNF542P-205ENST00000488113 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
ZNF542P-205ENST00000488113 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
ZNF542P-205ENST00000488113 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
ZNF542P-205ENST00000488113 NACADO15069 1562 aa23.19■■□□□ 1.3
ZNF542P-205ENST00000488113 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
ZNF542P-205ENST00000488113 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
ZNF542P-205ENST00000488113 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
ZNF542P-205ENST00000488113 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
ZNF542P-205ENST00000488113 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
ZNF542P-205ENST00000488113 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
ZNF542P-205ENST00000488113 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
ZNF542P-205ENST00000488113 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
ZNF542P-205ENST00000488113 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
ZNF542P-205ENST00000488113 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
ZNF542P-205ENST00000488113 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
ZNF542P-205ENST00000488113 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
ZNF542P-205ENST00000488113 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
ZNF542P-205ENST00000488113 CUX2O14529 1486 aa21.54■■□□□ 1.04
ZNF542P-205ENST00000488113 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
ZNF542P-205ENST00000488113 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
ZNF542P-205ENST00000488113 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
ZNF542P-205ENST00000488113 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
ZNF542P-205ENST00000488113 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
ZNF542P-205ENST00000488113 SMARCA4P51532 1647 aa21.14■□□□□ 0.98
ZNF542P-205ENST00000488113 NESP48681 1621 aa21.13■□□□□ 0.97
ZNF542P-205ENST00000488113 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
ZNF542P-205ENST00000488113 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
ZNF542P-205ENST00000488113 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
ZNF542P-205ENST00000488113 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
ZNF542P-205ENST00000488113 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
ZNF542P-205ENST00000488113 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
ZNF542P-205ENST00000488113 KIF21AQ7Z4S6 1674 aa20.82■□□□□ 0.92
ZNF542P-205ENST00000488113 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
ZNF542P-205ENST00000488113 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
ZNF542P-205ENST00000488113 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
ZNF542P-205ENST00000488113 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
ZNF542P-205ENST00000488113 WDR62O43379 1518 aa20.69■□□□□ 0.9
ZNF542P-205ENST00000488113 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
ZNF542P-205ENST00000488113 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
ZNF542P-205ENST00000488113 WIZO95785 1651 aa20.48■□□□□ 0.87
ZNF542P-205ENST00000488113 CFTRP13569 1480 aa20.44■□□□□ 0.86
ZNF542P-205ENST00000488113 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
ZNF542P-205ENST00000488113 URB2Q14146 1524 aaKnown RBP20.34■□□□□ 0.85
ZNF542P-205ENST00000488113 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
ZNF542P-205ENST00000488113 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
ZNF542P-205ENST00000488113 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
ZNF542P-205ENST00000488113 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
ZNF542P-205ENST00000488113 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
ZNF542P-205ENST00000488113 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
ZNF542P-205ENST00000488113 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
ZNF542P-205ENST00000488113 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
ZNF542P-205ENST00000488113 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
ZNF542P-205ENST00000488113 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
ZNF542P-205ENST00000488113 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
ZNF542P-205ENST00000488113 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.79
ZNF542P-205ENST00000488113 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
ZNF542P-205ENST00000488113 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
ZNF542P-205ENST00000488113 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
ZNF542P-205ENST00000488113 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
ZNF542P-205ENST00000488113 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
ZNF542P-205ENST00000488113 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.77
ZNF542P-205ENST00000488113 CHD1O14646 1710 aa19.87■□□□□ 0.77
ZNF542P-205ENST00000488113 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
ZNF542P-205ENST00000488113 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
ZNF542P-205ENST00000488113 FBLN2P98095 1184 aa19.79■□□□□ 0.76
ZNF542P-205ENST00000488113 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
ZNF542P-205ENST00000488113 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
ZNF542P-205ENST00000488113 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
ZNF542P-205ENST00000488113 SOGA1O94964 1423 aa19.72■□□□□ 0.75
ZNF542P-205ENST00000488113 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
ZNF542P-205ENST00000488113 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
ZNF542P-205ENST00000488113 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
ZNF542P-205ENST00000488113 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
ZNF542P-205ENST00000488113 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.74
ZNF542P-205ENST00000488113 CHMP7Q8WUX9 453 aaPredicted RBP19.63■□□□□ 0.73
ZNF542P-205ENST00000488113 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
ZNF542P-205ENST00000488113 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
ZNF542P-205ENST00000488113 CUX1P39880 1505 aa19.57■□□□□ 0.72
ZNF542P-205ENST00000488113 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
ZNF542P-205ENST00000488113 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
ZNF542P-205ENST00000488113 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
ZNF542P-205ENST00000488113 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
ZNF542P-205ENST00000488113 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
ZNF542P-205ENST00000488113 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
ZNF542P-205ENST00000488113 NUP160Q12769 1436 aa19.34■□□□□ 0.69
ZNF542P-205ENST00000488113 ERCC6L2Q5T890 1561 aa19.33■□□□□ 0.68
ZNF542P-205ENST00000488113 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
ZNF542P-205ENST00000488113 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
ZNF542P-205ENST00000488113 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
ZNF542P-205ENST00000488113 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
ZNF542P-205ENST00000488113 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
ZNF542P-205ENST00000488113 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
ZNF542P-205ENST00000488113 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
ZNF542P-205ENST00000488113 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
ZNF542P-205ENST00000488113 KIF13AQ9H1H9 1805 aa19.14■□□□□ 0.65
ZNF542P-205ENST00000488113 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
ZNF542P-205ENST00000488113 ABCC10Q5T3U5 1492 aa19.08■□□□□ 0.65
ZNF542P-205ENST00000488113 JPH4Q96JJ6 628 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms