RNA–Protein interactions for RNA: ENST00000488061.5

PDE6B-211, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-211ENST00000488061 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.63
PDE6B-211ENST00000488061 CCDC180Q9P1Z9 1646 aa39.26■■■■□ 3.88
PDE6B-211ENST00000488061 ABCC9O60706 1549 aa39.25■■■■□ 3.87
PDE6B-211ENST00000488061 DNAJC5BQ9UF47 199 aa37.42■■■■□ 3.58
PDE6B-211ENST00000488061 RB1CC1Q8TDY2 1594 aa37.06■■■■□ 3.52
PDE6B-211ENST00000488061 NACADO15069 1562 aa36.93■■■■□ 3.5
PDE6B-211ENST00000488061 MYO15BQ96JP2 1530 aa36.76■■■■□ 3.48
PDE6B-211ENST00000488061 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
PDE6B-211ENST00000488061 DCAF8L2P0C7V8 631 aa36.53■■■■□ 3.44
PDE6B-211ENST00000488061 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
PDE6B-211ENST00000488061 PABPN1Q86U42 306 aaKnown RBP eCLIP36.45■■■■□ 3.43
PDE6B-211ENST00000488061 UNC13AQ9UPW8 1703 aa36.3■■■■□ 3.4
PDE6B-211ENST00000488061 BICRAQ9NZM4 1560 aa36.09■■■■□ 3.37
PDE6B-211ENST00000488061 SHROOM4Q9ULL8 1493 aa35.63■■■■□ 3.29
PDE6B-211ENST00000488061 SCRIBQ14160 1630 aa35.58■■■■□ 3.29
PDE6B-211ENST00000488061 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
PDE6B-211ENST00000488061 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
PDE6B-211ENST00000488061 EIF4G1Q04637 1599 aaKnown RBP35.21■■■■□ 3.23
PDE6B-211ENST00000488061 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
PDE6B-211ENST00000488061 SMARCA4P51532 1647 aa34.13■■■■□ 3.05
PDE6B-211ENST00000488061 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
PDE6B-211ENST00000488061 CUX2O14529 1486 aa34.07■■■■□ 3.04
PDE6B-211ENST00000488061 NCAPD3P42695 1498 aa34.05■■■■□ 3.04
PDE6B-211ENST00000488061 SMARCA2P51531 1590 aa34■■■■□ 3.03
PDE6B-211ENST00000488061 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
PDE6B-211ENST00000488061 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
PDE6B-211ENST00000488061 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
PDE6B-211ENST00000488061 ERCC6Q03468 1493 aa33.89■■■■□ 3.02
PDE6B-211ENST00000488061 MROH2BQ7Z745 1585 aa33.79■■■■□ 3
PDE6B-211ENST00000488061 BAZ1BQ9UIG0 1483 aaKnown RBP33.68■■■□□ 2.98
PDE6B-211ENST00000488061 NESP48681 1621 aa33.58■■■□□ 2.97
PDE6B-211ENST00000488061 WIZO95785 1651 aa33.4■■■□□ 2.94
PDE6B-211ENST00000488061 THOC2Q8NI27 1593 aaKnown RBP33.36■■■□□ 2.93
PDE6B-211ENST00000488061 RSF1Q96T23 1441 aaPredicted RBP33.36■■■□□ 2.93
PDE6B-211ENST00000488061 LAMC3Q9Y6N6 1575 aa33.2■■■□□ 2.91
PDE6B-211ENST00000488061 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
PDE6B-211ENST00000488061 KIF21AQ7Z4S6 1674 aa33.11■■■□□ 2.89
PDE6B-211ENST00000488061 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
PDE6B-211ENST00000488061 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
PDE6B-211ENST00000488061 TRIM41Q8WV44 630 aa32.95■■■□□ 2.87
PDE6B-211ENST00000488061 CFTRP13569 1480 aa32.79■■■□□ 2.84
PDE6B-211ENST00000488061 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
PDE6B-211ENST00000488061 WDR62O43379 1518 aa32.74■■■□□ 2.83
PDE6B-211ENST00000488061 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
PDE6B-211ENST00000488061 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
PDE6B-211ENST00000488061 FANCD2Q9BXW9 1451 aa32.59■■■□□ 2.81
PDE6B-211ENST00000488061 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
PDE6B-211ENST00000488061 OSCARQ8IYS5 282 aa32.37■■■□□ 2.77
PDE6B-211ENST00000488061 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
PDE6B-211ENST00000488061 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
PDE6B-211ENST00000488061 ABCC8Q09428 1581 aa32.18■■■□□ 2.74
PDE6B-211ENST00000488061 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
PDE6B-211ENST00000488061 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
PDE6B-211ENST00000488061 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
PDE6B-211ENST00000488061 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
PDE6B-211ENST00000488061 DNMBPQ6XZF7 1577 aa32.04■■■□□ 2.72
PDE6B-211ENST00000488061 ZNF608Q9ULD9 1512 aaPredicted RBP31.95■■■□□ 2.71
PDE6B-211ENST00000488061 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
PDE6B-211ENST00000488061 ARHGEF11O15085 1522 aa31.91■■■□□ 2.7
PDE6B-211ENST00000488061 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
PDE6B-211ENST00000488061 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
PDE6B-211ENST00000488061 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
PDE6B-211ENST00000488061 CUX1P39880 1505 aa31.71■■■□□ 2.67
PDE6B-211ENST00000488061 CYB5RLQ6IPT4 315 aa31.67■■■□□ 2.66
PDE6B-211ENST00000488061 WDR97A6NE52 1622 aa31.65■■■□□ 2.66
PDE6B-211ENST00000488061 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
PDE6B-211ENST00000488061 CHD1O14646 1710 aa31.62■■■□□ 2.65
PDE6B-211ENST00000488061 SOGA1O94964 1423 aa31.62■■■□□ 2.65
PDE6B-211ENST00000488061 ARAP1Q96P48 1450 aa31.58■■■□□ 2.65
PDE6B-211ENST00000488061 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.64
PDE6B-211ENST00000488061 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
PDE6B-211ENST00000488061 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
PDE6B-211ENST00000488061 TRHP20396 242 aaPredicted RBP31.49■■■□□ 2.63
PDE6B-211ENST00000488061 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
PDE6B-211ENST00000488061 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
PDE6B-211ENST00000488061 FBLN2P98095 1184 aa31.41■■■□□ 2.62
PDE6B-211ENST00000488061 ABCA10Q8WWZ4 1543 aa31.4■■■□□ 2.62
PDE6B-211ENST00000488061 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
PDE6B-211ENST00000488061 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
PDE6B-211ENST00000488061 GRIN2BQ13224 1484 aa31.32■■■□□ 2.6
PDE6B-211ENST00000488061 MAGI1Q96QZ7 1491 aaPredicted RBP31.29■■■□□ 2.6
PDE6B-211ENST00000488061 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
PDE6B-211ENST00000488061 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
PDE6B-211ENST00000488061 CLASP1Q7Z460 1538 aa31.25■■■□□ 2.59
PDE6B-211ENST00000488061 PBRM1Q86U86 1689 aa31.23■■■□□ 2.59
PDE6B-211ENST00000488061 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
PDE6B-211ENST00000488061 SYNJ2O15056 1496 aa31.14■■■□□ 2.57
PDE6B-211ENST00000488061 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
PDE6B-211ENST00000488061 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
PDE6B-211ENST00000488061 AEBP2Q6ZN18 517 aaPredicted RBP30.99■■■□□ 2.55
PDE6B-211ENST00000488061 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
PDE6B-211ENST00000488061 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
PDE6B-211ENST00000488061 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
PDE6B-211ENST00000488061 KIF27Q86VH2 1401 aa30.86■■■□□ 2.53
PDE6B-211ENST00000488061 NUP160Q12769 1436 aa30.8■■■□□ 2.52
PDE6B-211ENST00000488061 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
PDE6B-211ENST00000488061 CUL7Q14999 1698 aa30.74■■■□□ 2.51
PDE6B-211ENST00000488061 CEP170Q5SW79 1584 aa30.72■■■□□ 2.51
PDE6B-211ENST00000488061 IGF1RP08069 1367 aa30.71■■■□□ 2.51
PDE6B-211ENST00000488061 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms