RNA–Protein interactions for RNA: ENST00000488060.1

SPATA13-211, Transcript of spermatogenesis associated 13, humanhuman

TSL 2

Gene SPATA13, Length 605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-211ENST00000488060 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
SPATA13-211ENST00000488060 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
SPATA13-211ENST00000488060 ABCC9O60706 1549 aa34.94■■■■□ 3.18
SPATA13-211ENST00000488060 DCAF8L2P0C7V8 631 aa33.63■■■□□ 2.97
SPATA13-211ENST00000488060 RB1CC1Q8TDY2 1594 aa33.59■■■□□ 2.97
SPATA13-211ENST00000488060 NACADO15069 1562 aa33.52■■■□□ 2.96
SPATA13-211ENST00000488060 ZCCHC6Q5VYS8 1495 aaKnown RBP33.35■■■□□ 2.93
SPATA13-211ENST00000488060 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
SPATA13-211ENST00000488060 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
SPATA13-211ENST00000488060 UNC13AQ9UPW8 1703 aa32.73■■■□□ 2.83
SPATA13-211ENST00000488060 PABPN1Q86U42 306 aaKnown RBP eCLIP32.68■■■□□ 2.82
SPATA13-211ENST00000488060 DNAJC5BQ9UF47 199 aa32.54■■■□□ 2.8
SPATA13-211ENST00000488060 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
SPATA13-211ENST00000488060 BICRAQ9NZM4 1560 aa32.51■■■□□ 2.79
SPATA13-211ENST00000488060 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
SPATA13-211ENST00000488060 EIF4G1Q04637 1599 aaKnown RBP31.69■■■□□ 2.66
SPATA13-211ENST00000488060 CC2D2AQ9P2K1 1620 aa31.59■■■□□ 2.65
SPATA13-211ENST00000488060 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
SPATA13-211ENST00000488060 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
SPATA13-211ENST00000488060 BAZ1AQ9NRL2 1556 aaPredicted RBP31.08■■■□□ 2.57
SPATA13-211ENST00000488060 ATAD2BQ9ULI0 1458 aa30.94■■■□□ 2.54
SPATA13-211ENST00000488060 NCAPD3P42695 1498 aa30.93■■■□□ 2.54
SPATA13-211ENST00000488060 SMARCA2P51531 1590 aa30.92■■■□□ 2.54
SPATA13-211ENST00000488060 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
SPATA13-211ENST00000488060 HMGXB3Q12766 1538 aa30.76■■■□□ 2.51
SPATA13-211ENST00000488060 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
SPATA13-211ENST00000488060 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
SPATA13-211ENST00000488060 WIZO95785 1651 aa30.53■■■□□ 2.48
SPATA13-211ENST00000488060 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
SPATA13-211ENST00000488060 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
SPATA13-211ENST00000488060 NESP48681 1621 aa30.19■■■□□ 2.42
SPATA13-211ENST00000488060 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
SPATA13-211ENST00000488060 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
SPATA13-211ENST00000488060 CADPSQ9ULU8 1353 aa30.05■■■□□ 2.4
SPATA13-211ENST00000488060 CUX2O14529 1486 aa29.99■■■□□ 2.39
SPATA13-211ENST00000488060 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
SPATA13-211ENST00000488060 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
SPATA13-211ENST00000488060 CFTRP13569 1480 aa29.84■■■□□ 2.37
SPATA13-211ENST00000488060 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
SPATA13-211ENST00000488060 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
SPATA13-211ENST00000488060 THOC2Q8NI27 1593 aaKnown RBP29.8■■■□□ 2.36
SPATA13-211ENST00000488060 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
SPATA13-211ENST00000488060 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
SPATA13-211ENST00000488060 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
SPATA13-211ENST00000488060 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
SPATA13-211ENST00000488060 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
SPATA13-211ENST00000488060 WDR62O43379 1518 aa29.5■■■□□ 2.31
SPATA13-211ENST00000488060 URB2Q14146 1524 aaKnown RBP29.38■■■□□ 2.29
SPATA13-211ENST00000488060 ABCC8Q09428 1581 aa29.24■■■□□ 2.27
SPATA13-211ENST00000488060 TOPBP1Q92547 1522 aa29.2■■■□□ 2.27
SPATA13-211ENST00000488060 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
SPATA13-211ENST00000488060 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
SPATA13-211ENST00000488060 CUX1P39880 1505 aa28.96■■■□□ 2.23
SPATA13-211ENST00000488060 POLA1P09884 1462 aaPredicted RBP28.96■■■□□ 2.23
SPATA13-211ENST00000488060 ZNF608Q9ULD9 1512 aaPredicted RBP28.9■■■□□ 2.22
SPATA13-211ENST00000488060 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
SPATA13-211ENST00000488060 SOGA1O94964 1423 aa28.88■■■□□ 2.21
SPATA13-211ENST00000488060 TARBP1Q13395 1621 aaKnown RBP28.86■■■□□ 2.21
SPATA13-211ENST00000488060 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
SPATA13-211ENST00000488060 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
SPATA13-211ENST00000488060 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
SPATA13-211ENST00000488060 AQRO60306 1485 aaKnown RBP eCLIP28.76■■■□□ 2.19
SPATA13-211ENST00000488060 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
SPATA13-211ENST00000488060 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
SPATA13-211ENST00000488060 SYNJ1O43426 1573 aa28.69■■■□□ 2.18
SPATA13-211ENST00000488060 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
SPATA13-211ENST00000488060 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
SPATA13-211ENST00000488060 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
SPATA13-211ENST00000488060 ABCA10Q8WWZ4 1543 aa28.6■■■□□ 2.17
SPATA13-211ENST00000488060 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
SPATA13-211ENST00000488060 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
SPATA13-211ENST00000488060 FBLN2P98095 1184 aa28.52■■■□□ 2.16
SPATA13-211ENST00000488060 SNAPC4Q5SXM2 1469 aa28.5■■■□□ 2.15
SPATA13-211ENST00000488060 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
SPATA13-211ENST00000488060 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
SPATA13-211ENST00000488060 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
SPATA13-211ENST00000488060 CHD1O14646 1710 aa28.41■■■□□ 2.14
SPATA13-211ENST00000488060 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
SPATA13-211ENST00000488060 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
SPATA13-211ENST00000488060 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
SPATA13-211ENST00000488060 RIMBP3CA6NJZ7 1639 aa28.26■■■□□ 2.11
SPATA13-211ENST00000488060 RIMBP3BA6NNM3 1639 aa28.26■■■□□ 2.11
SPATA13-211ENST00000488060 RIMBP3Q9UFD9 1639 aa28.26■■■□□ 2.11
SPATA13-211ENST00000488060 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
SPATA13-211ENST00000488060 KIF27Q86VH2 1401 aa28.23■■■□□ 2.11
SPATA13-211ENST00000488060 ADAMTS12P58397 1594 aa28.21■■■□□ 2.11
SPATA13-211ENST00000488060 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
SPATA13-211ENST00000488060 FHAD1B1AJZ9 1412 aa28.2■■■□□ 2.11
SPATA13-211ENST00000488060 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
SPATA13-211ENST00000488060 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
SPATA13-211ENST00000488060 IGF1RP08069 1367 aa28.08■■■□□ 2.09
SPATA13-211ENST00000488060 NUP160Q12769 1436 aa28.01■■■□□ 2.07
SPATA13-211ENST00000488060 CUL7Q14999 1698 aa28■■■□□ 2.07
SPATA13-211ENST00000488060 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
SPATA13-211ENST00000488060 ARAP1Q96P48 1450 aa27.98■■■□□ 2.07
SPATA13-211ENST00000488060 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
SPATA13-211ENST00000488060 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
SPATA13-211ENST00000488060 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
SPATA13-211ENST00000488060 JPH4Q96JJ6 628 aa27.78■■■□□ 2.04
SPATA13-211ENST00000488060 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms