RNA–Protein interactions for RNA: ENST00000487995.1

NSL1-205, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

TSL 2

Gene NSL1, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-205ENST00000487995 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
NSL1-205ENST00000487995 CCDC180Q9P1Z9 1646 aa33.98■■■■□ 3.03
NSL1-205ENST00000487995 ABCC9O60706 1549 aa33.67■■■□□ 2.98
NSL1-205ENST00000487995 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
NSL1-205ENST00000487995 NACADO15069 1562 aa32.07■■■□□ 2.72
NSL1-205ENST00000487995 DNAJC5BQ9UF47 199 aa31.97■■■□□ 2.71
NSL1-205ENST00000487995 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.7
NSL1-205ENST00000487995 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
NSL1-205ENST00000487995 ZCCHC6Q5VYS8 1495 aaKnown RBP31.68■■■□□ 2.66
NSL1-205ENST00000487995 DCAF1Q9Y4B6 1507 aa31.67■■■□□ 2.66
NSL1-205ENST00000487995 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
NSL1-205ENST00000487995 PABPN1Q86U42 306 aaKnown RBP eCLIP31.21■■■□□ 2.59
NSL1-205ENST00000487995 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
NSL1-205ENST00000487995 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
NSL1-205ENST00000487995 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
NSL1-205ENST00000487995 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
NSL1-205ENST00000487995 CECR2Q9BXF3 1484 aa30.35■■■□□ 2.45
NSL1-205ENST00000487995 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
NSL1-205ENST00000487995 DNAJC5Q9H3Z4 198 aa29.65■■■□□ 2.34
NSL1-205ENST00000487995 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
NSL1-205ENST00000487995 BAZ1AQ9NRL2 1556 aaPredicted RBP29.57■■■□□ 2.32
NSL1-205ENST00000487995 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
NSL1-205ENST00000487995 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
NSL1-205ENST00000487995 SMARCA2P51531 1590 aa29.5■■■□□ 2.31
NSL1-205ENST00000487995 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
NSL1-205ENST00000487995 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
NSL1-205ENST00000487995 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
NSL1-205ENST00000487995 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
NSL1-205ENST00000487995 CUX2O14529 1486 aa29.19■■■□□ 2.26
NSL1-205ENST00000487995 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
NSL1-205ENST00000487995 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
NSL1-205ENST00000487995 WIZO95785 1651 aa28.88■■■□□ 2.21
NSL1-205ENST00000487995 NESP48681 1621 aa28.81■■■□□ 2.2
NSL1-205ENST00000487995 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
NSL1-205ENST00000487995 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
NSL1-205ENST00000487995 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
NSL1-205ENST00000487995 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
NSL1-205ENST00000487995 PDS5BQ9NTI5 1447 aa28.68■■■□□ 2.18
NSL1-205ENST00000487995 KIF21AQ7Z4S6 1674 aa28.55■■■□□ 2.16
NSL1-205ENST00000487995 CFTRP13569 1480 aa28.49■■■□□ 2.15
NSL1-205ENST00000487995 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
NSL1-205ENST00000487995 MRC2Q9UBG0 1479 aa28.3■■■□□ 2.12
NSL1-205ENST00000487995 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
NSL1-205ENST00000487995 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
NSL1-205ENST00000487995 WDR62O43379 1518 aa28.22■■■□□ 2.11
NSL1-205ENST00000487995 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
NSL1-205ENST00000487995 PRDM2Q13029 1718 aa28.11■■■□□ 2.09
NSL1-205ENST00000487995 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
NSL1-205ENST00000487995 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
NSL1-205ENST00000487995 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
NSL1-205ENST00000487995 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
NSL1-205ENST00000487995 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
NSL1-205ENST00000487995 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
NSL1-205ENST00000487995 OSCARQ8IYS5 282 aa27.7■■■□□ 2.02
NSL1-205ENST00000487995 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
NSL1-205ENST00000487995 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
NSL1-205ENST00000487995 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
NSL1-205ENST00000487995 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
NSL1-205ENST00000487995 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
NSL1-205ENST00000487995 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■■□□ 2
NSL1-205ENST00000487995 SOGA1O94964 1423 aa27.49■■□□□ 1.99
NSL1-205ENST00000487995 CUX1P39880 1505 aa27.48■■□□□ 1.99
NSL1-205ENST00000487995 WDR97A6NE52 1622 aa27.45■■□□□ 1.98
NSL1-205ENST00000487995 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
NSL1-205ENST00000487995 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.97
NSL1-205ENST00000487995 ARHGEF11O15085 1522 aa27.37■■□□□ 1.97
NSL1-205ENST00000487995 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.971e-7■■■□□ 16.7
NSL1-205ENST00000487995 RAD54L2Q9Y4B4 1467 aa27.37■■□□□ 1.97
NSL1-205ENST00000487995 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
NSL1-205ENST00000487995 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
NSL1-205ENST00000487995 CHD1O14646 1710 aa27.27■■□□□ 1.96
NSL1-205ENST00000487995 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
NSL1-205ENST00000487995 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
NSL1-205ENST00000487995 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
NSL1-205ENST00000487995 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
NSL1-205ENST00000487995 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
NSL1-205ENST00000487995 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
NSL1-205ENST00000487995 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
NSL1-205ENST00000487995 CYB5RLQ6IPT4 315 aa27.11■■□□□ 1.93
NSL1-205ENST00000487995 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
NSL1-205ENST00000487995 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
NSL1-205ENST00000487995 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
NSL1-205ENST00000487995 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
NSL1-205ENST00000487995 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
NSL1-205ENST00000487995 FBLN2P98095 1184 aa27.05■■□□□ 1.92
NSL1-205ENST00000487995 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
NSL1-205ENST00000487995 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
NSL1-205ENST00000487995 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
NSL1-205ENST00000487995 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
NSL1-205ENST00000487995 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
NSL1-205ENST00000487995 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
NSL1-205ENST00000487995 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
NSL1-205ENST00000487995 KIF27Q86VH2 1401 aa26.78■■□□□ 1.88
NSL1-205ENST00000487995 NUP160Q12769 1436 aa26.76■■□□□ 1.87
NSL1-205ENST00000487995 IGF1RP08069 1367 aa26.71■■□□□ 1.87
NSL1-205ENST00000487995 CEP170Q5SW79 1584 aa26.61■■□□□ 1.85
NSL1-205ENST00000487995 CUL7Q14999 1698 aa26.59■■□□□ 1.85
NSL1-205ENST00000487995 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
NSL1-205ENST00000487995 AEBP2Q6ZN18 517 aaPredicted RBP26.53■■□□□ 1.84
NSL1-205ENST00000487995 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms