RNA–Protein interactions for RNA: ENST00000487965.1

PODXL-207, Transcript of podocalyxin like, humanhuman

TSL 2

Gene PODXL, Length 809 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-207ENST00000487965 NISCHQ9Y2I1 1504 aa31.97■■■□□ 2.71
PODXL-207ENST00000487965 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
PODXL-207ENST00000487965 ABCC9O60706 1549 aa28■■■□□ 2.07
PODXL-207ENST00000487965 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
PODXL-207ENST00000487965 NACADO15069 1562 aa26.97■■□□□ 1.91
PODXL-207ENST00000487965 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
PODXL-207ENST00000487965 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
PODXL-207ENST00000487965 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
PODXL-207ENST00000487965 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
PODXL-207ENST00000487965 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
PODXL-207ENST00000487965 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
PODXL-207ENST00000487965 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
PODXL-207ENST00000487965 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
PODXL-207ENST00000487965 DNAJC5BQ9UF47 199 aa25.89■■□□□ 1.74
PODXL-207ENST00000487965 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
PODXL-207ENST00000487965 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
PODXL-207ENST00000487965 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
PODXL-207ENST00000487965 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
PODXL-207ENST00000487965 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
PODXL-207ENST00000487965 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
PODXL-207ENST00000487965 SMARCA4P51532 1647 aa24.83■■□□□ 1.56
PODXL-207ENST00000487965 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
PODXL-207ENST00000487965 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
PODXL-207ENST00000487965 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
PODXL-207ENST00000487965 PEG3Q9GZU2 1588 aa24.7■■□□□ 1.54
PODXL-207ENST00000487965 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
PODXL-207ENST00000487965 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
PODXL-207ENST00000487965 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
PODXL-207ENST00000487965 WIZO95785 1651 aa24.24■■□□□ 1.47
PODXL-207ENST00000487965 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
PODXL-207ENST00000487965 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
PODXL-207ENST00000487965 CUX2O14529 1486 aa24.18■■□□□ 1.46
PODXL-207ENST00000487965 NESP48681 1621 aa24.14■■□□□ 1.46
PODXL-207ENST00000487965 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
PODXL-207ENST00000487965 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
PODXL-207ENST00000487965 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
PODXL-207ENST00000487965 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
PODXL-207ENST00000487965 CFTRP13569 1480 aa23.91■■□□□ 1.42
PODXL-207ENST00000487965 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
PODXL-207ENST00000487965 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
PODXL-207ENST00000487965 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
PODXL-207ENST00000487965 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
PODXL-207ENST00000487965 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
PODXL-207ENST00000487965 WDR62O43379 1518 aa23.74■■□□□ 1.39
PODXL-207ENST00000487965 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
PODXL-207ENST00000487965 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
PODXL-207ENST00000487965 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
PODXL-207ENST00000487965 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
PODXL-207ENST00000487965 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
PODXL-207ENST00000487965 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
PODXL-207ENST00000487965 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
PODXL-207ENST00000487965 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
PODXL-207ENST00000487965 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.29
PODXL-207ENST00000487965 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
PODXL-207ENST00000487965 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
PODXL-207ENST00000487965 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
PODXL-207ENST00000487965 OSCARQ8IYS5 282 aa23.09■■□□□ 1.29
PODXL-207ENST00000487965 SOGA1O94964 1423 aa23.06■■□□□ 1.28
PODXL-207ENST00000487965 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
PODXL-207ENST00000487965 CUX1P39880 1505 aa23.05■■□□□ 1.28
PODXL-207ENST00000487965 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
PODXL-207ENST00000487965 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.27
PODXL-207ENST00000487965 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
PODXL-207ENST00000487965 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
PODXL-207ENST00000487965 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
PODXL-207ENST00000487965 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
PODXL-207ENST00000487965 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
PODXL-207ENST00000487965 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
PODXL-207ENST00000487965 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PODXL-207ENST00000487965 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
PODXL-207ENST00000487965 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
PODXL-207ENST00000487965 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
PODXL-207ENST00000487965 CHD1O14646 1710 aa22.77■■□□□ 1.23
PODXL-207ENST00000487965 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
PODXL-207ENST00000487965 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
PODXL-207ENST00000487965 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
PODXL-207ENST00000487965 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
PODXL-207ENST00000487965 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
PODXL-207ENST00000487965 FBLN2P98095 1184 aa22.69■■□□□ 1.22
PODXL-207ENST00000487965 RIMBP3CA6NJZ7 1639 aa22.65■■□□□ 1.22
PODXL-207ENST00000487965 RIMBP3BA6NNM3 1639 aa22.65■■□□□ 1.22
PODXL-207ENST00000487965 RIMBP3Q9UFD9 1639 aa22.65■■□□□ 1.22
PODXL-207ENST00000487965 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
PODXL-207ENST00000487965 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
PODXL-207ENST00000487965 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
PODXL-207ENST00000487965 TRIM41Q8WV44 630 aa22.58■■□□□ 1.21
PODXL-207ENST00000487965 FHAD1B1AJZ9 1412 aa22.56■■□□□ 1.2
PODXL-207ENST00000487965 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
PODXL-207ENST00000487965 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
PODXL-207ENST00000487965 NUP160Q12769 1436 aa22.48■■□□□ 1.19
PODXL-207ENST00000487965 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
PODXL-207ENST00000487965 ARAP1Q96P48 1450 aa22.43■■□□□ 1.18
PODXL-207ENST00000487965 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
PODXL-207ENST00000487965 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
PODXL-207ENST00000487965 IGF1RP08069 1367 aa22.36■■□□□ 1.17
PODXL-207ENST00000487965 CUL7Q14999 1698 aa22.35■■□□□ 1.17
PODXL-207ENST00000487965 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
PODXL-207ENST00000487965 CARMIL1Q5VZK9 1371 aa22.22■■□□□ 1.15
PODXL-207ENST00000487965 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
PODXL-207ENST00000487965 KIAA0586Q9BVV6 1533 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms