RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 NISCHQ9Y2I1 1504 aa30.48■■■□□ 2.47
OPTN-212ENST00000487935 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
OPTN-212ENST00000487935 ABCC9O60706 1549 aa27.35■■□□□ 1.97
OPTN-212ENST00000487935 RB1CC1Q8TDY2 1594 aa26.06■■□□□ 1.76
OPTN-212ENST00000487935 NACADO15069 1562 aa25.87■■□□□ 1.73
OPTN-212ENST00000487935 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
OPTN-212ENST00000487935 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
OPTN-212ENST00000487935 MYO15BQ96JP2 1530 aa25.52■■□□□ 1.68
OPTN-212ENST00000487935 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
OPTN-212ENST00000487935 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
OPTN-212ENST00000487935 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
OPTN-212ENST00000487935 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
OPTN-212ENST00000487935 DCAF1Q9Y4B6 1507 aa25.19■■□□□ 1.62
OPTN-212ENST00000487935 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
OPTN-212ENST00000487935 SCRIBQ14160 1630 aa24.93■■□□□ 1.58
OPTN-212ENST00000487935 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
OPTN-212ENST00000487935 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
OPTN-212ENST00000487935 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
OPTN-212ENST00000487935 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
OPTN-212ENST00000487935 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
OPTN-212ENST00000487935 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
OPTN-212ENST00000487935 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
OPTN-212ENST00000487935 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
OPTN-212ENST00000487935 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
OPTN-212ENST00000487935 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
OPTN-212ENST00000487935 CUX2O14529 1486 aa23.59■■□□□ 1.37
OPTN-212ENST00000487935 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
OPTN-212ENST00000487935 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
OPTN-212ENST00000487935 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
OPTN-212ENST00000487935 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
OPTN-212ENST00000487935 NESP48681 1621 aa23.48■■□□□ 1.35
OPTN-212ENST00000487935 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
OPTN-212ENST00000487935 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
OPTN-212ENST00000487935 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
OPTN-212ENST00000487935 WIZO95785 1651 aa23.21■■□□□ 1.31
OPTN-212ENST00000487935 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
OPTN-212ENST00000487935 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
OPTN-212ENST00000487935 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
OPTN-212ENST00000487935 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
OPTN-212ENST00000487935 WDR62O43379 1518 aa22.94■■□□□ 1.26
OPTN-212ENST00000487935 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
OPTN-212ENST00000487935 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
OPTN-212ENST00000487935 CFTRP13569 1480 aa22.89■■□□□ 1.25
OPTN-212ENST00000487935 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.25
OPTN-212ENST00000487935 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
OPTN-212ENST00000487935 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
OPTN-212ENST00000487935 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
OPTN-212ENST00000487935 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
OPTN-212ENST00000487935 OSCARQ8IYS5 282 aa22.52■■□□□ 1.2
OPTN-212ENST00000487935 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
OPTN-212ENST00000487935 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
OPTN-212ENST00000487935 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
OPTN-212ENST00000487935 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
OPTN-212ENST00000487935 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
OPTN-212ENST00000487935 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
OPTN-212ENST00000487935 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
OPTN-212ENST00000487935 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
OPTN-212ENST00000487935 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
OPTN-212ENST00000487935 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.15
OPTN-212ENST00000487935 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.15
OPTN-212ENST00000487935 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.15
OPTN-212ENST00000487935 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
OPTN-212ENST00000487935 RAD54L2Q9Y4B4 1467 aa22.14■■□□□ 1.13
OPTN-212ENST00000487935 CHD1O14646 1710 aa22.14■■□□□ 1.13
OPTN-212ENST00000487935 SOGA1O94964 1423 aa22.14■■□□□ 1.13
OPTN-212ENST00000487935 FBLN2P98095 1184 aa22.09■■□□□ 1.13
OPTN-212ENST00000487935 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
OPTN-212ENST00000487935 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
OPTN-212ENST00000487935 CUX1P39880 1505 aa22.06■■□□□ 1.12
OPTN-212ENST00000487935 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
OPTN-212ENST00000487935 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
OPTN-212ENST00000487935 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
OPTN-212ENST00000487935 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
OPTN-212ENST00000487935 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
OPTN-212ENST00000487935 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.1
OPTN-212ENST00000487935 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
OPTN-212ENST00000487935 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
OPTN-212ENST00000487935 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
OPTN-212ENST00000487935 CLASP1Q7Z460 1538 aa21.87■■□□□ 1.09
OPTN-212ENST00000487935 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
OPTN-212ENST00000487935 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
OPTN-212ENST00000487935 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
OPTN-212ENST00000487935 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
OPTN-212ENST00000487935 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
OPTN-212ENST00000487935 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
OPTN-212ENST00000487935 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
OPTN-212ENST00000487935 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
OPTN-212ENST00000487935 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
OPTN-212ENST00000487935 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
OPTN-212ENST00000487935 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
OPTN-212ENST00000487935 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
OPTN-212ENST00000487935 NUP160Q12769 1436 aa21.58■■□□□ 1.05
OPTN-212ENST00000487935 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
OPTN-212ENST00000487935 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
OPTN-212ENST00000487935 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
OPTN-212ENST00000487935 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
OPTN-212ENST00000487935 JPH4Q96JJ6 628 aa21.38■■□□□ 1.01
OPTN-212ENST00000487935 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
OPTN-212ENST00000487935 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
OPTN-212ENST00000487935 KIF27Q86VH2 1401 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms