RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 NISCHQ9Y2I1 1504 aa50.5■■■■■ 5.67
TRIM8-204ENST00000487927 CCDC180Q9P1Z9 1646 aa45.23■■■■■ 4.83
TRIM8-204ENST00000487927 ABCC9O60706 1549 aa44.91■■■■■ 4.78
TRIM8-204ENST00000487927 RB1CC1Q8TDY2 1594 aa42.88■■■■■ 4.45
TRIM8-204ENST00000487927 NACADO15069 1562 aa42.65■■■■■ 4.42
TRIM8-204ENST00000487927 DCAF8L2P0C7V8 631 aa42.39■■■■■ 4.38
TRIM8-204ENST00000487927 MYO15BQ96JP2 1530 aa42.18■■■■■ 4.34
TRIM8-204ENST00000487927 UNC13AQ9UPW8 1703 aa42.03■■■■■ 4.32
TRIM8-204ENST00000487927 ZCCHC6Q5VYS8 1495 aaKnown RBP41.92■■■■■ 4.3
TRIM8-204ENST00000487927 DNAJC5BQ9UF47 199 aa41.91■■■■■ 4.3
TRIM8-204ENST00000487927 PABPN1Q86U42 306 aaKnown RBP eCLIP41.83■■■■■ 4.29
TRIM8-204ENST00000487927 DCAF1Q9Y4B6 1507 aa41.74■■■■■ 4.27
TRIM8-204ENST00000487927 BICRAQ9NZM4 1560 aa41.69■■■■■ 4.26
TRIM8-204ENST00000487927 SCRIBQ14160 1630 aa41.22■■■■■ 4.19
TRIM8-204ENST00000487927 SHROOM4Q9ULL8 1493 aa41.09■■■■■ 4.17
TRIM8-204ENST00000487927 CC2D2AQ9P2K1 1620 aa40.63■■■■■ 4.09
TRIM8-204ENST00000487927 EIF4G1Q04637 1599 aaKnown RBP40.61■■■■■ 4.09
TRIM8-204ENST00000487927 CECR2Q9BXF3 1484 aa40.43■■■■■ 4.06
TRIM8-204ENST00000487927 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
TRIM8-204ENST00000487927 SMARCA4P51532 1647 aa39.36■■■■□ 3.89
TRIM8-204ENST00000487927 ATAD2BQ9ULI0 1458 aa39.3■■■■□ 3.88
TRIM8-204ENST00000487927 SMARCA2P51531 1590 aa39.19■■■■□ 3.86
TRIM8-204ENST00000487927 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
TRIM8-204ENST00000487927 HMGXB3Q12766 1538 aa39.13■■■■□ 3.85
TRIM8-204ENST00000487927 PEG3Q9GZU2 1588 aa38.98■■■■□ 3.83
TRIM8-204ENST00000487927 MROH2BQ7Z745 1585 aa38.94■■■■□ 3.82
TRIM8-204ENST00000487927 BAZ1BQ9UIG0 1483 aaKnown RBP38.92■■■■□ 3.82
TRIM8-204ENST00000487927 ERCC6Q03468 1493 aa38.72■■■■□ 3.79
TRIM8-204ENST00000487927 NESP48681 1621 aa38.7■■■■□ 3.79
TRIM8-204ENST00000487927 CUX2O14529 1486 aa38.6■■■■□ 3.77
TRIM8-204ENST00000487927 WIZO95785 1651 aa38.5■■■■□ 3.75
TRIM8-204ENST00000487927 LAMC3Q9Y6N6 1575 aa38.45■■■■□ 3.75
TRIM8-204ENST00000487927 THOC2Q8NI27 1593 aaKnown RBP38.28■■■■□ 3.72
TRIM8-204ENST00000487927 KIF21AQ7Z4S6 1674 aa38.25■■■■□ 3.71
TRIM8-204ENST00000487927 DNAJC5Q9H3Z4 198 aa38.24■■■■□ 3.71
TRIM8-204ENST00000487927 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
TRIM8-204ENST00000487927 PDS5BQ9NTI5 1447 aa38.17■■■■□ 3.7
TRIM8-204ENST00000487927 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
TRIM8-204ENST00000487927 TOP2AP11388 1531 aaKnown RBP38.01■■■■□ 3.67
TRIM8-204ENST00000487927 MRC2Q9UBG0 1479 aa37.86■■■■□ 3.65
TRIM8-204ENST00000487927 CFTRP13569 1480 aa37.82■■■■□ 3.64
TRIM8-204ENST00000487927 WDR62O43379 1518 aa37.79■■■■□ 3.64
TRIM8-204ENST00000487927 CEP164Q9UPV0 1460 aa37.76■■■■□ 3.63
TRIM8-204ENST00000487927 FANCD2Q9BXW9 1451 aa37.75■■■■□ 3.63
TRIM8-204ENST00000487927 CCDC88BA6NC98 1476 aa37.56■■■■□ 3.6
TRIM8-204ENST00000487927 PRDM2Q13029 1718 aa37.55■■■■□ 3.6
TRIM8-204ENST00000487927 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
TRIM8-204ENST00000487927 TOPBP1Q92547 1522 aa37.08■■■■□ 3.53
TRIM8-204ENST00000487927 IFT140Q96RY7 1462 aa37■■■■□ 3.51
TRIM8-204ENST00000487927 DNMBPQ6XZF7 1577 aa36.98■■■■□ 3.51
TRIM8-204ENST00000487927 ABCC8Q09428 1581 aa36.97■■■■□ 3.51
TRIM8-204ENST00000487927 ZNF608Q9ULD9 1512 aaPredicted RBP36.95■■■■□ 3.5
TRIM8-204ENST00000487927 OSCARQ8IYS5 282 aa36.82■■■■□ 3.48
TRIM8-204ENST00000487927 TARBP1Q13395 1621 aaKnown RBP36.77■■■■□ 3.48
TRIM8-204ENST00000487927 EIF4G3O43432 1585 aaKnown RBP36.77■■■■□ 3.48
TRIM8-204ENST00000487927 POLA1P09884 1462 aaPredicted RBP36.72■■■■□ 3.47
TRIM8-204ENST00000487927 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
TRIM8-204ENST00000487927 TRIM41Q8WV44 630 aa36.64■■■■□ 3.46
TRIM8-204ENST00000487927 AQRO60306 1485 aaKnown RBP eCLIP36.62■■■■□ 3.455e-7■■■■■ 33.8
TRIM8-204ENST00000487927 RAD54L2Q9Y4B4 1467 aa36.58■■■■□ 3.45
TRIM8-204ENST00000487927 CUX1P39880 1505 aa36.56■■■■□ 3.44
TRIM8-204ENST00000487927 FGD5Q6ZNL6 1462 aa36.53■■■■□ 3.44
TRIM8-204ENST00000487927 SOGA1O94964 1423 aa36.51■■■■□ 3.44
TRIM8-204ENST00000487927 CHD1O14646 1710 aa36.48■■■■□ 3.43
TRIM8-204ENST00000487927 TDRD9Q8NDG6 1382 aaKnown RBP36.42■■■■□ 3.42
TRIM8-204ENST00000487927 RIMBP3CA6NJZ7 1639 aa36.42■■■■□ 3.42
TRIM8-204ENST00000487927 RIMBP3BA6NNM3 1639 aa36.42■■■■□ 3.42
TRIM8-204ENST00000487927 RIMBP3Q9UFD9 1639 aa36.42■■■■□ 3.42
TRIM8-204ENST00000487927 WDR97A6NE52 1622 aa36.38■■■■□ 3.41
TRIM8-204ENST00000487927 ARHGEF11O15085 1522 aa36.3■■■■□ 3.4
TRIM8-204ENST00000487927 SNAPC4Q5SXM2 1469 aa36.26■■■■□ 3.4
TRIM8-204ENST00000487927 FBLN2P98095 1184 aa36.24■■■■□ 3.39
TRIM8-204ENST00000487927 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
TRIM8-204ENST00000487927 MAGI1Q96QZ7 1491 aaPredicted RBP36.17■■■■□ 3.38
TRIM8-204ENST00000487927 PBRM1Q86U86 1689 aa36.14■■■■□ 3.38
TRIM8-204ENST00000487927 ABCA10Q8WWZ4 1543 aa36.13■■■■□ 3.37
TRIM8-204ENST00000487927 GAPVD1Q14C86 1478 aa36.1■■■■□ 3.37
TRIM8-204ENST00000487927 ABCA5Q8WWZ7 1642 aa36.09■■■■□ 3.37
TRIM8-204ENST00000487927 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
TRIM8-204ENST00000487927 TOP2BQ02880 1626 aa36.05■■■■□ 3.36
TRIM8-204ENST00000487927 CLASP1Q7Z460 1538 aa36.04■■■■□ 3.36
TRIM8-204ENST00000487927 SYNJ2O15056 1496 aa36.04■■■■□ 3.36
TRIM8-204ENST00000487927 SYNJ1O43426 1573 aa36.03■■■■□ 3.36
TRIM8-204ENST00000487927 CHMP7Q8WUX9 453 aaPredicted RBP36.03■■■■□ 3.36
TRIM8-204ENST00000487927 WRNQ14191 1432 aaPredicted RBP eCLIP36.01■■■■□ 3.36
TRIM8-204ENST00000487927 ARAP1Q96P48 1450 aa35.98■■■■□ 3.35
TRIM8-204ENST00000487927 CYB5RLQ6IPT4 315 aa35.95■■■■□ 3.35
TRIM8-204ENST00000487927 ADAMTS12P58397 1594 aa35.79■■■■□ 3.32
TRIM8-204ENST00000487927 GRIN2AQ12879 1464 aa35.73■■■■□ 3.31
TRIM8-204ENST00000487927 ERICH3Q5RHP9 1530 aa35.68■■■■□ 3.3
TRIM8-204ENST00000487927 FHAD1B1AJZ9 1412 aa35.65■■■■□ 3.3
TRIM8-204ENST00000487927 CEP170Q5SW79 1584 aa35.64■■■■□ 3.3
TRIM8-204ENST00000487927 NUP160Q12769 1436 aa35.62■■■■□ 3.29
TRIM8-204ENST00000487927 ERCC6L2Q5T890 1561 aa35.51■■■■□ 3.28
TRIM8-204ENST00000487927 SHROOM2Q13796 1616 aa35.47■■■■□ 3.27
TRIM8-204ENST00000487927 TRHP20396 242 aaPredicted RBP35.43■■■■□ 3.26
TRIM8-204ENST00000487927 KIF27Q86VH2 1401 aa35.29■■■■□ 3.24
TRIM8-204ENST00000487927 RUSC2Q8N2Y8 1516 aa35.28■■■■□ 3.24
TRIM8-204ENST00000487927 IGF1RP08069 1367 aa35.26■■■■□ 3.24
TRIM8-204ENST00000487927 CUL7Q14999 1698 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms