RNA–Protein interactions for RNA: ENST00000487902.5

PDE6B-210, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-210ENST00000487902 NISCHQ9Y2I1 1504 aa42.92■■■■■ 4.46
PDE6B-210ENST00000487902 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
PDE6B-210ENST00000487902 ABCC9O60706 1549 aa37.39■■■■□ 3.58
PDE6B-210ENST00000487902 RB1CC1Q8TDY2 1594 aa36.06■■■■□ 3.36
PDE6B-210ENST00000487902 NACADO15069 1562 aa36■■■■□ 3.35
PDE6B-210ENST00000487902 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
PDE6B-210ENST00000487902 MYO15BQ96JP2 1530 aa35.79■■■■□ 3.32
PDE6B-210ENST00000487902 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
PDE6B-210ENST00000487902 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
PDE6B-210ENST00000487902 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
PDE6B-210ENST00000487902 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
PDE6B-210ENST00000487902 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
PDE6B-210ENST00000487902 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
PDE6B-210ENST00000487902 SHROOM4Q9ULL8 1493 aa34.68■■■■□ 3.14
PDE6B-210ENST00000487902 DNAJC5BQ9UF47 199 aa34.27■■■■□ 3.08
PDE6B-210ENST00000487902 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
PDE6B-210ENST00000487902 CC2D2AQ9P2K1 1620 aa33.85■■■■□ 3.01
PDE6B-210ENST00000487902 CECR2Q9BXF3 1484 aa33.66■■■□□ 2.98
PDE6B-210ENST00000487902 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
PDE6B-210ENST00000487902 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
PDE6B-210ENST00000487902 SMARCA2P51531 1590 aa33.19■■■□□ 2.9
PDE6B-210ENST00000487902 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
PDE6B-210ENST00000487902 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
PDE6B-210ENST00000487902 HMGXB3Q12766 1538 aa33.03■■■□□ 2.88
PDE6B-210ENST00000487902 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
PDE6B-210ENST00000487902 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
PDE6B-210ENST00000487902 BAZ1BQ9UIG0 1483 aaKnown RBP32.92■■■□□ 2.86
PDE6B-210ENST00000487902 WIZO95785 1651 aa32.66■■■□□ 2.82
PDE6B-210ENST00000487902 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
PDE6B-210ENST00000487902 TOP2AP11388 1531 aaKnown RBP32.38■■■□□ 2.77
PDE6B-210ENST00000487902 LAMC3Q9Y6N6 1575 aa32.36■■■□□ 2.77
PDE6B-210ENST00000487902 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
PDE6B-210ENST00000487902 NESP48681 1621 aa32.29■■■□□ 2.76
PDE6B-210ENST00000487902 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
PDE6B-210ENST00000487902 PDS5BQ9NTI5 1447 aa32.17■■■□□ 2.74
PDE6B-210ENST00000487902 CUX2O14529 1486 aa32.04■■■□□ 2.72
PDE6B-210ENST00000487902 CFTRP13569 1480 aa31.98■■■□□ 2.71
PDE6B-210ENST00000487902 KIF21AQ7Z4S6 1674 aa31.96■■■□□ 2.71
PDE6B-210ENST00000487902 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
PDE6B-210ENST00000487902 THOC2Q8NI27 1593 aaKnown RBP31.87■■■□□ 2.69
PDE6B-210ENST00000487902 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
PDE6B-210ENST00000487902 CEP164Q9UPV0 1460 aa31.83■■■□□ 2.69
PDE6B-210ENST00000487902 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
PDE6B-210ENST00000487902 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
PDE6B-210ENST00000487902 SUPT5HO00267 1087 aaKnown RBP31.74■■■□□ 2.67
PDE6B-210ENST00000487902 WDR62O43379 1518 aa31.66■■■□□ 2.66
PDE6B-210ENST00000487902 URB2Q14146 1524 aaKnown RBP31.45■■■□□ 2.63
PDE6B-210ENST00000487902 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
PDE6B-210ENST00000487902 TOPBP1Q92547 1522 aa31.29■■■□□ 2.6
PDE6B-210ENST00000487902 DNMBPQ6XZF7 1577 aa31.28■■■□□ 2.6
PDE6B-210ENST00000487902 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
PDE6B-210ENST00000487902 DNAJC5Q9H3Z4 198 aa31.08■■■□□ 2.57
PDE6B-210ENST00000487902 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.55
PDE6B-210ENST00000487902 CUX1P39880 1505 aa30.98■■■□□ 2.55
PDE6B-210ENST00000487902 TARBP1Q13395 1621 aaKnown RBP30.94■■■□□ 2.54
PDE6B-210ENST00000487902 FGD5Q6ZNL6 1462 aa30.93■■■□□ 2.54
PDE6B-210ENST00000487902 SOGA1O94964 1423 aa30.91■■■□□ 2.54
PDE6B-210ENST00000487902 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
PDE6B-210ENST00000487902 EIF4G3O43432 1585 aaKnown RBP30.85■■■□□ 2.53
PDE6B-210ENST00000487902 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
PDE6B-210ENST00000487902 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
PDE6B-210ENST00000487902 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.53
PDE6B-210ENST00000487902 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
PDE6B-210ENST00000487902 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
PDE6B-210ENST00000487902 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.51
PDE6B-210ENST00000487902 OSCARQ8IYS5 282 aa30.7■■■□□ 2.51
PDE6B-210ENST00000487902 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
PDE6B-210ENST00000487902 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
PDE6B-210ENST00000487902 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
PDE6B-210ENST00000487902 GRIN2BQ13224 1484 aa30.59■■■□□ 2.49
PDE6B-210ENST00000487902 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
PDE6B-210ENST00000487902 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
PDE6B-210ENST00000487902 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.48
PDE6B-210ENST00000487902 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
PDE6B-210ENST00000487902 PBRM1Q86U86 1689 aa30.49■■■□□ 2.47
PDE6B-210ENST00000487902 CHD1O14646 1710 aa30.47■■■□□ 2.47
PDE6B-210ENST00000487902 FBLN2P98095 1184 aa30.47■■■□□ 2.47
PDE6B-210ENST00000487902 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
PDE6B-210ENST00000487902 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
PDE6B-210ENST00000487902 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
PDE6B-210ENST00000487902 ADAMTS12P58397 1594 aa30.24■■■□□ 2.43
PDE6B-210ENST00000487902 FHAD1B1AJZ9 1412 aa30.23■■■□□ 2.43
PDE6B-210ENST00000487902 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
PDE6B-210ENST00000487902 GRIN2AQ12879 1464 aa30.17■■■□□ 2.42
PDE6B-210ENST00000487902 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
PDE6B-210ENST00000487902 ARHGEF11O15085 1522 aa30.13■■■□□ 2.41
PDE6B-210ENST00000487902 RIMBP3CA6NJZ7 1639 aa30.13■■■□□ 2.41
PDE6B-210ENST00000487902 RIMBP3BA6NNM3 1639 aa30.13■■■□□ 2.41
PDE6B-210ENST00000487902 RIMBP3Q9UFD9 1639 aa30.13■■■□□ 2.41
PDE6B-210ENST00000487902 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
PDE6B-210ENST00000487902 CUL7Q14999 1698 aa30.06■■■□□ 2.4
PDE6B-210ENST00000487902 IGF1RP08069 1367 aa30.03■■■□□ 2.4
PDE6B-210ENST00000487902 NUP160Q12769 1436 aa30.03■■■□□ 2.4
PDE6B-210ENST00000487902 CEP170Q5SW79 1584 aa29.97■■■□□ 2.39
PDE6B-210ENST00000487902 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
PDE6B-210ENST00000487902 CYB5RLQ6IPT4 315 aa29.86■■■□□ 2.37
PDE6B-210ENST00000487902 ARAP1Q96P48 1450 aa29.84■■■□□ 2.37
PDE6B-210ENST00000487902 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
PDE6B-210ENST00000487902 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
PDE6B-210ENST00000487902 KIAA0586Q9BVV6 1533 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms