RNA–Protein interactions for RNA: ENST00000487837.1

RGCC-202, Transcript of regulator of cell cycle, humanhuman

TSL 3

Gene RGCC, Length 243 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGCC-202ENST00000487837 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
RGCC-202ENST00000487837 ABCC9O60706 1549 aa32.21■■■□□ 2.75
RGCC-202ENST00000487837 CCDC180Q9P1Z9 1646 aa32.07■■■□□ 2.72
RGCC-202ENST00000487837 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
RGCC-202ENST00000487837 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
RGCC-202ENST00000487837 NACADO15069 1562 aa30.38■■■□□ 2.45
RGCC-202ENST00000487837 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
RGCC-202ENST00000487837 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
RGCC-202ENST00000487837 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
RGCC-202ENST00000487837 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
RGCC-202ENST00000487837 BICRAQ9NZM4 1560 aa29.75■■■□□ 2.35
RGCC-202ENST00000487837 ZCCHC6Q5VYS8 1495 aaKnown RBP29.69■■■□□ 2.34
RGCC-202ENST00000487837 DCAF1Q9Y4B6 1507 aa29.59■■■□□ 2.33
RGCC-202ENST00000487837 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
RGCC-202ENST00000487837 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
RGCC-202ENST00000487837 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
RGCC-202ENST00000487837 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
RGCC-202ENST00000487837 EIF4G1Q04637 1599 aaKnown RBP28.97■■■□□ 2.23
RGCC-202ENST00000487837 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
RGCC-202ENST00000487837 ATAD2BQ9ULI0 1458 aa28.03■■■□□ 2.08
RGCC-202ENST00000487837 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
RGCC-202ENST00000487837 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
RGCC-202ENST00000487837 DNAJC5Q9H3Z4 198 aa27.81■■■□□ 2.04
RGCC-202ENST00000487837 HMGXB3Q12766 1538 aa27.81■■■□□ 2.04
RGCC-202ENST00000487837 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
RGCC-202ENST00000487837 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
RGCC-202ENST00000487837 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
RGCC-202ENST00000487837 NESP48681 1621 aa27.69■■■□□ 2.02
RGCC-202ENST00000487837 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
RGCC-202ENST00000487837 CUX2O14529 1486 aa27.67■■■□□ 2.02
RGCC-202ENST00000487837 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
RGCC-202ENST00000487837 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
RGCC-202ENST00000487837 WIZO95785 1651 aa27.31■■□□□ 1.96
RGCC-202ENST00000487837 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
RGCC-202ENST00000487837 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
RGCC-202ENST00000487837 CADPSQ9ULU8 1353 aa27.28■■□□□ 1.96
RGCC-202ENST00000487837 KIF21AQ7Z4S6 1674 aa27.24■■□□□ 1.95
RGCC-202ENST00000487837 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
RGCC-202ENST00000487837 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
RGCC-202ENST00000487837 WDR62O43379 1518 aa26.95■■□□□ 1.9
RGCC-202ENST00000487837 CFTRP13569 1480 aa26.94■■□□□ 1.9
RGCC-202ENST00000487837 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
RGCC-202ENST00000487837 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
RGCC-202ENST00000487837 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
RGCC-202ENST00000487837 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
RGCC-202ENST00000487837 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
RGCC-202ENST00000487837 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
RGCC-202ENST00000487837 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
RGCC-202ENST00000487837 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
RGCC-202ENST00000487837 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
RGCC-202ENST00000487837 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
RGCC-202ENST00000487837 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
RGCC-202ENST00000487837 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
RGCC-202ENST00000487837 DNMBPQ6XZF7 1577 aa26.27■■□□□ 1.8
RGCC-202ENST00000487837 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
RGCC-202ENST00000487837 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
RGCC-202ENST00000487837 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
RGCC-202ENST00000487837 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
RGCC-202ENST00000487837 RAD54L2Q9Y4B4 1467 aa26.11■■□□□ 1.77
RGCC-202ENST00000487837 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
RGCC-202ENST00000487837 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
RGCC-202ENST00000487837 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
RGCC-202ENST00000487837 SOGA1O94964 1423 aa26.08■■□□□ 1.77
RGCC-202ENST00000487837 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
RGCC-202ENST00000487837 FBLN2P98095 1184 aa26.04■■□□□ 1.76
RGCC-202ENST00000487837 ARHGEF11O15085 1522 aa26.02■■□□□ 1.76
RGCC-202ENST00000487837 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
RGCC-202ENST00000487837 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
RGCC-202ENST00000487837 CUX1P39880 1505 aa25.98■■□□□ 1.75
RGCC-202ENST00000487837 CHD1O14646 1710 aa25.97■■□□□ 1.75
RGCC-202ENST00000487837 CYB5RLQ6IPT4 315 aa25.95■■□□□ 1.74
RGCC-202ENST00000487837 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
RGCC-202ENST00000487837 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
RGCC-202ENST00000487837 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
RGCC-202ENST00000487837 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
RGCC-202ENST00000487837 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
RGCC-202ENST00000487837 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
RGCC-202ENST00000487837 GAPVD1Q14C86 1478 aa25.72■■□□□ 1.71
RGCC-202ENST00000487837 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
RGCC-202ENST00000487837 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
RGCC-202ENST00000487837 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
RGCC-202ENST00000487837 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
RGCC-202ENST00000487837 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
RGCC-202ENST00000487837 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
RGCC-202ENST00000487837 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
RGCC-202ENST00000487837 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
RGCC-202ENST00000487837 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
RGCC-202ENST00000487837 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
RGCC-202ENST00000487837 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
RGCC-202ENST00000487837 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
RGCC-202ENST00000487837 NUP160Q12769 1436 aa25.39■■□□□ 1.66
RGCC-202ENST00000487837 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
RGCC-202ENST00000487837 ERCC6L2Q5T890 1561 aa25.37■■□□□ 1.65
RGCC-202ENST00000487837 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
RGCC-202ENST00000487837 ERICH3Q5RHP9 1530 aa25.33■■□□□ 1.65
RGCC-202ENST00000487837 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
RGCC-202ENST00000487837 JPH4Q96JJ6 628 aa25.23■■□□□ 1.63
RGCC-202ENST00000487837 PRG4Q92954 1404 aaPredicted RBP25.18■■□□□ 1.62
RGCC-202ENST00000487837 IGF1RP08069 1367 aa25.15■■□□□ 1.62
RGCC-202ENST00000487837 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms