RNA–Protein interactions for RNA: ENST00000487820.1

CTTNBP2-212, Transcript of cortactin binding protein 2, humanhuman

TSL 3

Gene CTTNBP2, Length 379 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-212ENST00000487820 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
CTTNBP2-212ENST00000487820 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
CTTNBP2-212ENST00000487820 ABCC9O60706 1549 aa25.54■■□□□ 1.68
CTTNBP2-212ENST00000487820 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
CTTNBP2-212ENST00000487820 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
CTTNBP2-212ENST00000487820 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
CTTNBP2-212ENST00000487820 NACADO15069 1562 aa24.43■■□□□ 1.5
CTTNBP2-212ENST00000487820 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
CTTNBP2-212ENST00000487820 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
CTTNBP2-212ENST00000487820 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
CTTNBP2-212ENST00000487820 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
CTTNBP2-212ENST00000487820 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
CTTNBP2-212ENST00000487820 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
CTTNBP2-212ENST00000487820 DNAJC5BQ9UF47 199 aa23.43■■□□□ 1.34
CTTNBP2-212ENST00000487820 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
CTTNBP2-212ENST00000487820 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.3
CTTNBP2-212ENST00000487820 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
CTTNBP2-212ENST00000487820 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
CTTNBP2-212ENST00000487820 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
CTTNBP2-212ENST00000487820 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
CTTNBP2-212ENST00000487820 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
CTTNBP2-212ENST00000487820 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
CTTNBP2-212ENST00000487820 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
CTTNBP2-212ENST00000487820 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
CTTNBP2-212ENST00000487820 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
CTTNBP2-212ENST00000487820 WIZO95785 1651 aa22.47■■□□□ 1.19
CTTNBP2-212ENST00000487820 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
CTTNBP2-212ENST00000487820 HMGXB3Q12766 1538 aa22.45■■□□□ 1.18
CTTNBP2-212ENST00000487820 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
CTTNBP2-212ENST00000487820 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
CTTNBP2-212ENST00000487820 NESP48681 1621 aa22.14■■□□□ 1.14
CTTNBP2-212ENST00000487820 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
CTTNBP2-212ENST00000487820 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
CTTNBP2-212ENST00000487820 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.11
CTTNBP2-212ENST00000487820 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
CTTNBP2-212ENST00000487820 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
CTTNBP2-212ENST00000487820 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
CTTNBP2-212ENST00000487820 CFTRP13569 1480 aa21.81■■□□□ 1.08
CTTNBP2-212ENST00000487820 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
CTTNBP2-212ENST00000487820 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
CTTNBP2-212ENST00000487820 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
CTTNBP2-212ENST00000487820 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
CTTNBP2-212ENST00000487820 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
CTTNBP2-212ENST00000487820 CUX2O14529 1486 aa21.63■■□□□ 1.05
CTTNBP2-212ENST00000487820 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
CTTNBP2-212ENST00000487820 WDR62O43379 1518 aa21.54■■□□□ 1.04
CTTNBP2-212ENST00000487820 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
CTTNBP2-212ENST00000487820 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
CTTNBP2-212ENST00000487820 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
CTTNBP2-212ENST00000487820 CUX1P39880 1505 aa21.27■■□□□ 1
CTTNBP2-212ENST00000487820 ABCC8Q09428 1581 aa21.27■□□□□ 0.99
CTTNBP2-212ENST00000487820 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
CTTNBP2-212ENST00000487820 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
CTTNBP2-212ENST00000487820 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
CTTNBP2-212ENST00000487820 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
CTTNBP2-212ENST00000487820 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
CTTNBP2-212ENST00000487820 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.97
CTTNBP2-212ENST00000487820 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
CTTNBP2-212ENST00000487820 SOGA1O94964 1423 aa21.12■□□□□ 0.97
CTTNBP2-212ENST00000487820 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
CTTNBP2-212ENST00000487820 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
CTTNBP2-212ENST00000487820 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
CTTNBP2-212ENST00000487820 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
CTTNBP2-212ENST00000487820 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
CTTNBP2-212ENST00000487820 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
CTTNBP2-212ENST00000487820 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
CTTNBP2-212ENST00000487820 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
CTTNBP2-212ENST00000487820 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
CTTNBP2-212ENST00000487820 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
CTTNBP2-212ENST00000487820 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
CTTNBP2-212ENST00000487820 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
CTTNBP2-212ENST00000487820 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
CTTNBP2-212ENST00000487820 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
CTTNBP2-212ENST00000487820 FBLN2P98095 1184 aa20.81■□□□□ 0.92
CTTNBP2-212ENST00000487820 CHD1O14646 1710 aa20.81■□□□□ 0.92
CTTNBP2-212ENST00000487820 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
CTTNBP2-212ENST00000487820 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
CTTNBP2-212ENST00000487820 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
CTTNBP2-212ENST00000487820 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
CTTNBP2-212ENST00000487820 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
CTTNBP2-212ENST00000487820 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
CTTNBP2-212ENST00000487820 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
CTTNBP2-212ENST00000487820 KIF27Q86VH2 1401 aa20.64■□□□□ 0.89
CTTNBP2-212ENST00000487820 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
CTTNBP2-212ENST00000487820 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
CTTNBP2-212ENST00000487820 IGF1RP08069 1367 aa20.59■□□□□ 0.89
CTTNBP2-212ENST00000487820 GRIN2AQ12879 1464 aa20.58■□□□□ 0.89
CTTNBP2-212ENST00000487820 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
CTTNBP2-212ENST00000487820 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
CTTNBP2-212ENST00000487820 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
CTTNBP2-212ENST00000487820 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
CTTNBP2-212ENST00000487820 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
CTTNBP2-212ENST00000487820 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
CTTNBP2-212ENST00000487820 CUL7Q14999 1698 aa20.48■□□□□ 0.87
CTTNBP2-212ENST00000487820 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
CTTNBP2-212ENST00000487820 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
CTTNBP2-212ENST00000487820 NUP160Q12769 1436 aa20.47■□□□□ 0.87
CTTNBP2-212ENST00000487820 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.85
CTTNBP2-212ENST00000487820 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
CTTNBP2-212ENST00000487820 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms