RNA–Protein interactions for RNA: ENST00000487760.1

PACSIN1-204, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 2

Gene PACSIN1, Length 668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-204ENST00000487760 NISCHQ9Y2I1 1504 aa28.83■■■□□ 2.21
PACSIN1-204ENST00000487760 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
PACSIN1-204ENST00000487760 ABCC9O60706 1549 aa25.62■■□□□ 1.69
PACSIN1-204ENST00000487760 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
PACSIN1-204ENST00000487760 NACADO15069 1562 aa24.29■■□□□ 1.48
PACSIN1-204ENST00000487760 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
PACSIN1-204ENST00000487760 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
PACSIN1-204ENST00000487760 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
PACSIN1-204ENST00000487760 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
PACSIN1-204ENST00000487760 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
PACSIN1-204ENST00000487760 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
PACSIN1-204ENST00000487760 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
PACSIN1-204ENST00000487760 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
PACSIN1-204ENST00000487760 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
PACSIN1-204ENST00000487760 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
PACSIN1-204ENST00000487760 CC2D2AQ9P2K1 1620 aa23.14■■□□□ 1.29
PACSIN1-204ENST00000487760 EIF4G1Q04637 1599 aaKnown RBP23.13■■□□□ 1.29
PACSIN1-204ENST00000487760 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
PACSIN1-204ENST00000487760 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
PACSIN1-204ENST00000487760 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
PACSIN1-204ENST00000487760 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
PACSIN1-204ENST00000487760 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
PACSIN1-204ENST00000487760 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
PACSIN1-204ENST00000487760 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
PACSIN1-204ENST00000487760 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
PACSIN1-204ENST00000487760 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
PACSIN1-204ENST00000487760 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
PACSIN1-204ENST00000487760 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
PACSIN1-204ENST00000487760 NESP48681 1621 aa22.07■■□□□ 1.12
PACSIN1-204ENST00000487760 WIZO95785 1651 aa22.01■■□□□ 1.11
PACSIN1-204ENST00000487760 CUX2O14529 1486 aa21.93■■□□□ 1.1
PACSIN1-204ENST00000487760 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
PACSIN1-204ENST00000487760 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
PACSIN1-204ENST00000487760 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
PACSIN1-204ENST00000487760 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
PACSIN1-204ENST00000487760 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
PACSIN1-204ENST00000487760 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
PACSIN1-204ENST00000487760 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
PACSIN1-204ENST00000487760 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
PACSIN1-204ENST00000487760 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
PACSIN1-204ENST00000487760 CFTRP13569 1480 aa21.56■■□□□ 1.04
PACSIN1-204ENST00000487760 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
PACSIN1-204ENST00000487760 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
PACSIN1-204ENST00000487760 WDR62O43379 1518 aa21.53■■□□□ 1.04
PACSIN1-204ENST00000487760 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
PACSIN1-204ENST00000487760 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
PACSIN1-204ENST00000487760 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
PACSIN1-204ENST00000487760 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
PACSIN1-204ENST00000487760 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
PACSIN1-204ENST00000487760 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
PACSIN1-204ENST00000487760 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
PACSIN1-204ENST00000487760 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
PACSIN1-204ENST00000487760 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
PACSIN1-204ENST00000487760 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
PACSIN1-204ENST00000487760 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
PACSIN1-204ENST00000487760 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
PACSIN1-204ENST00000487760 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
PACSIN1-204ENST00000487760 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
PACSIN1-204ENST00000487760 CUX1P39880 1505 aa20.89■□□□□ 0.94
PACSIN1-204ENST00000487760 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
PACSIN1-204ENST00000487760 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
PACSIN1-204ENST00000487760 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
PACSIN1-204ENST00000487760 SOGA1O94964 1423 aa20.85■□□□□ 0.93
PACSIN1-204ENST00000487760 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
PACSIN1-204ENST00000487760 CHD1O14646 1710 aa20.78■□□□□ 0.92
PACSIN1-204ENST00000487760 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
PACSIN1-204ENST00000487760 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
PACSIN1-204ENST00000487760 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
PACSIN1-204ENST00000487760 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
PACSIN1-204ENST00000487760 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
PACSIN1-204ENST00000487760 FBLN2P98095 1184 aa20.71■□□□□ 0.91
PACSIN1-204ENST00000487760 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
PACSIN1-204ENST00000487760 GRIN2BQ13224 1484 aa20.64■□□□□ 0.89
PACSIN1-204ENST00000487760 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
PACSIN1-204ENST00000487760 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
PACSIN1-204ENST00000487760 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
PACSIN1-204ENST00000487760 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
PACSIN1-204ENST00000487760 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
PACSIN1-204ENST00000487760 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
PACSIN1-204ENST00000487760 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
PACSIN1-204ENST00000487760 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
PACSIN1-204ENST00000487760 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
PACSIN1-204ENST00000487760 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
PACSIN1-204ENST00000487760 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
PACSIN1-204ENST00000487760 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
PACSIN1-204ENST00000487760 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
PACSIN1-204ENST00000487760 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
PACSIN1-204ENST00000487760 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
PACSIN1-204ENST00000487760 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
PACSIN1-204ENST00000487760 ERICH3Q5RHP9 1530 aa20.36■□□□□ 0.85
PACSIN1-204ENST00000487760 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
PACSIN1-204ENST00000487760 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
PACSIN1-204ENST00000487760 NUP160Q12769 1436 aa20.31■□□□□ 0.84
PACSIN1-204ENST00000487760 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
PACSIN1-204ENST00000487760 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.84
PACSIN1-204ENST00000487760 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
PACSIN1-204ENST00000487760 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
PACSIN1-204ENST00000487760 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
PACSIN1-204ENST00000487760 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
PACSIN1-204ENST00000487760 IGF1RP08069 1367 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms