RNA–Protein interactions for RNA: ENST00000487745.5

EXD3-210, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,992 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-210ENST00000487745 NISCHQ9Y2I1 1504 aa40.86■■■■■ 4.13
EXD3-210ENST00000487745 CCDC180Q9P1Z9 1646 aa35.74■■■■□ 3.31
EXD3-210ENST00000487745 ABCC9O60706 1549 aa34.5■■■■□ 3.11
EXD3-210ENST00000487745 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
EXD3-210ENST00000487745 DCAF8L2P0C7V8 631 aa34.16■■■■□ 3.06
EXD3-210ENST00000487745 DCAF1Q9Y4B6 1507 aa33.64■■■□□ 2.98
EXD3-210ENST00000487745 NACADO15069 1562 aa33.44■■■□□ 2.94
EXD3-210ENST00000487745 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
EXD3-210ENST00000487745 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
EXD3-210ENST00000487745 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
EXD3-210ENST00000487745 SCRIBQ14160 1630 aa33■■■□□ 2.87
EXD3-210ENST00000487745 UNC13AQ9UPW8 1703 aa32.76■■■□□ 2.83
EXD3-210ENST00000487745 PABPN1Q86U42 306 aaKnown RBP eCLIP32.52■■■□□ 2.8
EXD3-210ENST00000487745 BICRAQ9NZM4 1560 aa32.42■■■□□ 2.78
EXD3-210ENST00000487745 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
EXD3-210ENST00000487745 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
EXD3-210ENST00000487745 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
EXD3-210ENST00000487745 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
EXD3-210ENST00000487745 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
EXD3-210ENST00000487745 SMARCA4P51532 1647 aa31.52■■■□□ 2.64
EXD3-210ENST00000487745 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
EXD3-210ENST00000487745 WIZO95785 1651 aa31.38■■■□□ 2.61
EXD3-210ENST00000487745 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
EXD3-210ENST00000487745 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
EXD3-210ENST00000487745 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
EXD3-210ENST00000487745 DNAJC5BQ9UF47 199 aa31.03■■■□□ 2.56
EXD3-210ENST00000487745 SMARCA2P51531 1590 aa31.01■■■□□ 2.55
EXD3-210ENST00000487745 BAZ1BQ9UIG0 1483 aaKnown RBP30.92■■■□□ 2.54
EXD3-210ENST00000487745 NCAPD3P42695 1498 aa30.9■■■□□ 2.54
EXD3-210ENST00000487745 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.54
EXD3-210ENST00000487745 HMGXB3Q12766 1538 aa30.77■■■□□ 2.52
EXD3-210ENST00000487745 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
EXD3-210ENST00000487745 NESP48681 1621 aa30.16■■■□□ 2.42
EXD3-210ENST00000487745 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
EXD3-210ENST00000487745 CFTRP13569 1480 aa30.1■■■□□ 2.41
EXD3-210ENST00000487745 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
EXD3-210ENST00000487745 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
EXD3-210ENST00000487745 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
EXD3-210ENST00000487745 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
EXD3-210ENST00000487745 FANCD2Q9BXW9 1451 aa29.8■■■□□ 2.36
EXD3-210ENST00000487745 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
EXD3-210ENST00000487745 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
EXD3-210ENST00000487745 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
EXD3-210ENST00000487745 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
EXD3-210ENST00000487745 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
EXD3-210ENST00000487745 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
EXD3-210ENST00000487745 CUX1P39880 1505 aa29.58■■■□□ 2.33
EXD3-210ENST00000487745 ERCC6Q03468 1493 aa29.54■■■□□ 2.32
EXD3-210ENST00000487745 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
EXD3-210ENST00000487745 TOP2BQ02880 1626 aa29.46■■■□□ 2.31
EXD3-210ENST00000487745 BIVM-ERCC5R4GMW8 1640 aa29.43■■■□□ 2.3
EXD3-210ENST00000487745 TOPBP1Q92547 1522 aa29.43■■■□□ 2.3
EXD3-210ENST00000487745 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.29
EXD3-210ENST00000487745 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
EXD3-210ENST00000487745 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
EXD3-210ENST00000487745 FAM9AQ8IZU1 332 aaPredicted RBP29.32■■■□□ 2.28
EXD3-210ENST00000487745 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
EXD3-210ENST00000487745 SOGA1O94964 1423 aa29.26■■■□□ 2.27
EXD3-210ENST00000487745 POLA1P09884 1462 aaPredicted RBP29.25■■■□□ 2.27
EXD3-210ENST00000487745 RAD54L2Q9Y4B4 1467 aa29.25■■■□□ 2.27
EXD3-210ENST00000487745 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
EXD3-210ENST00000487745 WDR62O43379 1518 aa29.23■■■□□ 2.27
EXD3-210ENST00000487745 CUX2O14529 1486 aa29.12■■■□□ 2.25
EXD3-210ENST00000487745 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
EXD3-210ENST00000487745 TARBP1Q13395 1621 aaKnown RBP29.02■■■□□ 2.24
EXD3-210ENST00000487745 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
EXD3-210ENST00000487745 ABCA10Q8WWZ4 1543 aa28.98■■■□□ 2.23
EXD3-210ENST00000487745 LOC105371045A0A1W2PR82 267 aa28.97■■■□□ 2.23
EXD3-210ENST00000487745 WDR97A6NE52 1622 aa28.96■■■□□ 2.23
EXD3-210ENST00000487745 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
EXD3-210ENST00000487745 KIF27Q86VH2 1401 aa28.93■■■□□ 2.22
EXD3-210ENST00000487745 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
EXD3-210ENST00000487745 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
EXD3-210ENST00000487745 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.22
EXD3-210ENST00000487745 EEA1Q15075 1411 aa28.83■■■□□ 2.21
EXD3-210ENST00000487745 IGF1RP08069 1367 aa28.82■■■□□ 2.2
EXD3-210ENST00000487745 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
EXD3-210ENST00000487745 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
EXD3-210ENST00000487745 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
EXD3-210ENST00000487745 PBRM1Q86U86 1689 aa28.68■■■□□ 2.18
EXD3-210ENST00000487745 CARMIL1Q5VZK9 1371 aa28.64■■■□□ 2.18
EXD3-210ENST00000487745 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.18
EXD3-210ENST00000487745 PRXQ9BXM0 1461 aa28.63■■■□□ 2.17
EXD3-210ENST00000487745 GRIN2BQ13224 1484 aa28.62■■■□□ 2.17
EXD3-210ENST00000487745 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
EXD3-210ENST00000487745 KIF21BO75037 1637 aa28.57■■■□□ 2.16
EXD3-210ENST00000487745 UBTFP17480 764 aaKnown RBP28.56■■■□□ 2.16
EXD3-210ENST00000487745 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
EXD3-210ENST00000487745 GOLGA3Q08378 1498 aa28.52■■■□□ 2.16
EXD3-210ENST00000487745 CUL7Q14999 1698 aa28.5■■■□□ 2.15
EXD3-210ENST00000487745 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
EXD3-210ENST00000487745 FBLN2P98095 1184 aa28.46■■■□□ 2.15
EXD3-210ENST00000487745 FHAD1B1AJZ9 1412 aa28.44■■■□□ 2.14
EXD3-210ENST00000487745 RANGAP1P46060 587 aaPredicted RBP28.42■■■□□ 2.14
EXD3-210ENST00000487745 MAGI1Q96QZ7 1491 aaPredicted RBP28.39■■■□□ 2.14
EXD3-210ENST00000487745 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
EXD3-210ENST00000487745 TNIKQ9UKE5 1360 aa28.35■■■□□ 2.13
EXD3-210ENST00000487745 SYNJ2O15056 1496 aa28.33■■■□□ 2.13
EXD3-210ENST00000487745 GRIN2AQ12879 1464 aa28.29■■■□□ 2.12
EXD3-210ENST00000487745 CHD1O14646 1710 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms