RNA–Protein interactions for RNA: ENST00000487744.1

CRIP3-207, Transcript of cysteine rich protein 3, humanhuman

TSL 2

Gene CRIP3, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-207ENST00000487744 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
CRIP3-207ENST00000487744 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
CRIP3-207ENST00000487744 ABCC9O60706 1549 aa32.22■■■□□ 2.75
CRIP3-207ENST00000487744 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
CRIP3-207ENST00000487744 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
CRIP3-207ENST00000487744 NACADO15069 1562 aa30.84■■■□□ 2.53
CRIP3-207ENST00000487744 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
CRIP3-207ENST00000487744 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
CRIP3-207ENST00000487744 DCAF1Q9Y4B6 1507 aa30.43■■■□□ 2.46
CRIP3-207ENST00000487744 UNC13AQ9UPW8 1703 aa30.26■■■□□ 2.43
CRIP3-207ENST00000487744 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
CRIP3-207ENST00000487744 SCRIBQ14160 1630 aa30■■■□□ 2.39
CRIP3-207ENST00000487744 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
CRIP3-207ENST00000487744 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
CRIP3-207ENST00000487744 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
CRIP3-207ENST00000487744 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
CRIP3-207ENST00000487744 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
CRIP3-207ENST00000487744 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
CRIP3-207ENST00000487744 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
CRIP3-207ENST00000487744 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
CRIP3-207ENST00000487744 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
CRIP3-207ENST00000487744 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
CRIP3-207ENST00000487744 NCAPD3P42695 1498 aa28.43■■■□□ 2.14
CRIP3-207ENST00000487744 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
CRIP3-207ENST00000487744 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
CRIP3-207ENST00000487744 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
CRIP3-207ENST00000487744 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
CRIP3-207ENST00000487744 WIZO95785 1651 aa28.14■■■□□ 2.1
CRIP3-207ENST00000487744 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
CRIP3-207ENST00000487744 NESP48681 1621 aa27.85■■■□□ 2.05
CRIP3-207ENST00000487744 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
CRIP3-207ENST00000487744 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
CRIP3-207ENST00000487744 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
CRIP3-207ENST00000487744 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
CRIP3-207ENST00000487744 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
CRIP3-207ENST00000487744 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
CRIP3-207ENST00000487744 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
CRIP3-207ENST00000487744 CUX2O14529 1486 aa27.45■■□□□ 1.99
CRIP3-207ENST00000487744 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
CRIP3-207ENST00000487744 CFTRP13569 1480 aa27.44■■□□□ 1.98
CRIP3-207ENST00000487744 SUPT5HO00267 1087 aaKnown RBP27.35■■□□□ 1.97
CRIP3-207ENST00000487744 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
CRIP3-207ENST00000487744 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
CRIP3-207ENST00000487744 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
CRIP3-207ENST00000487744 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
CRIP3-207ENST00000487744 WDR62O43379 1518 aa27.2■■□□□ 1.94
CRIP3-207ENST00000487744 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
CRIP3-207ENST00000487744 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
CRIP3-207ENST00000487744 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
CRIP3-207ENST00000487744 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
CRIP3-207ENST00000487744 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
CRIP3-207ENST00000487744 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
CRIP3-207ENST00000487744 CUX1P39880 1505 aa26.67■■□□□ 1.86
CRIP3-207ENST00000487744 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
CRIP3-207ENST00000487744 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
CRIP3-207ENST00000487744 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
CRIP3-207ENST00000487744 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
CRIP3-207ENST00000487744 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
CRIP3-207ENST00000487744 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
CRIP3-207ENST00000487744 SOGA1O94964 1423 aa26.54■■□□□ 1.84
CRIP3-207ENST00000487744 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.83
CRIP3-207ENST00000487744 WRNQ14191 1432 aaPredicted RBP eCLIP26.46■■□□□ 1.83
CRIP3-207ENST00000487744 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
CRIP3-207ENST00000487744 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
CRIP3-207ENST00000487744 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
CRIP3-207ENST00000487744 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
CRIP3-207ENST00000487744 WDR97A6NE52 1622 aa26.39■■□□□ 1.81
CRIP3-207ENST00000487744 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
CRIP3-207ENST00000487744 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
CRIP3-207ENST00000487744 CHD1O14646 1710 aa26.25■■□□□ 1.79
CRIP3-207ENST00000487744 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
CRIP3-207ENST00000487744 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
CRIP3-207ENST00000487744 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
CRIP3-207ENST00000487744 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
CRIP3-207ENST00000487744 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
CRIP3-207ENST00000487744 FBLN2P98095 1184 aa26.22■■□□□ 1.79
CRIP3-207ENST00000487744 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
CRIP3-207ENST00000487744 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
CRIP3-207ENST00000487744 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
CRIP3-207ENST00000487744 ADAMTS12P58397 1594 aa26■■□□□ 1.75
CRIP3-207ENST00000487744 ERICH3Q5RHP9 1530 aa25.99■■□□□ 1.75
CRIP3-207ENST00000487744 RIMBP3CA6NJZ7 1639 aa25.95■■□□□ 1.74
CRIP3-207ENST00000487744 RIMBP3BA6NNM3 1639 aa25.95■■□□□ 1.74
CRIP3-207ENST00000487744 RIMBP3Q9UFD9 1639 aa25.95■■□□□ 1.74
CRIP3-207ENST00000487744 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
CRIP3-207ENST00000487744 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
CRIP3-207ENST00000487744 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
CRIP3-207ENST00000487744 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
CRIP3-207ENST00000487744 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
CRIP3-207ENST00000487744 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
CRIP3-207ENST00000487744 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
CRIP3-207ENST00000487744 IGF1RP08069 1367 aa25.78■■□□□ 1.72
CRIP3-207ENST00000487744 CUL7Q14999 1698 aa25.77■■□□□ 1.72
CRIP3-207ENST00000487744 NUP160Q12769 1436 aa25.77■■□□□ 1.72
CRIP3-207ENST00000487744 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
CRIP3-207ENST00000487744 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
CRIP3-207ENST00000487744 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
CRIP3-207ENST00000487744 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
CRIP3-207ENST00000487744 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
CRIP3-207ENST00000487744 ERCC6L2Q5T890 1561 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms