RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 NISCHQ9Y2I1 1504 aa20.3■□□□□ 0.84
RTCB-205ENST00000487704 ABCC9O60706 1549 aa19.36■□□□□ 0.69
RTCB-205ENST00000487704 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
RTCB-205ENST00000487704 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
RTCB-205ENST00000487704 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
RTCB-205ENST00000487704 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.49
RTCB-205ENST00000487704 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
RTCB-205ENST00000487704 NACADO15069 1562 aa17.79■□□□□ 0.44
RTCB-205ENST00000487704 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
RTCB-205ENST00000487704 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.41
RTCB-205ENST00000487704 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
RTCB-205ENST00000487704 DCAF8L2P0C7V8 631 aa17.47■□□□□ 0.39
RTCB-205ENST00000487704 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
RTCB-205ENST00000487704 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.37
RTCB-205ENST00000487704 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
RTCB-205ENST00000487704 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
RTCB-205ENST00000487704 CUX2O14529 1486 aa17.1■□□□□ 0.33
RTCB-205ENST00000487704 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
RTCB-205ENST00000487704 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
RTCB-205ENST00000487704 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
RTCB-205ENST00000487704 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
RTCB-205ENST00000487704 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
RTCB-205ENST00000487704 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
RTCB-205ENST00000487704 NESP48681 1621 aa16.39■□□□□ 0.21
RTCB-205ENST00000487704 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
RTCB-205ENST00000487704 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
RTCB-205ENST00000487704 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
RTCB-205ENST00000487704 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
RTCB-205ENST00000487704 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
RTCB-205ENST00000487704 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
RTCB-205ENST00000487704 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
RTCB-205ENST00000487704 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
RTCB-205ENST00000487704 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
RTCB-205ENST00000487704 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
RTCB-205ENST00000487704 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
RTCB-205ENST00000487704 MRC2Q9UBG0 1479 aa16.01■□□□□ 0.15
RTCB-205ENST00000487704 WDR62O43379 1518 aa16■□□□□ 0.15
RTCB-205ENST00000487704 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
RTCB-205ENST00000487704 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
RTCB-205ENST00000487704 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
RTCB-205ENST00000487704 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
RTCB-205ENST00000487704 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
RTCB-205ENST00000487704 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
RTCB-205ENST00000487704 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
RTCB-205ENST00000487704 PEG3Q9GZU2 1588 aa15.88■□□□□ 0.13
RTCB-205ENST00000487704 CYB5RLQ6IPT4 315 aa15.86■□□□□ 0.13
RTCB-205ENST00000487704 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
RTCB-205ENST00000487704 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
RTCB-205ENST00000487704 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
RTCB-205ENST00000487704 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
RTCB-205ENST00000487704 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
RTCB-205ENST00000487704 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
RTCB-205ENST00000487704 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
RTCB-205ENST00000487704 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
RTCB-205ENST00000487704 CFTRP13569 1480 aa15.55■□□□□ 0.08
RTCB-205ENST00000487704 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
RTCB-205ENST00000487704 CHD1O14646 1710 aa15.39■□□□□ 0.05
RTCB-205ENST00000487704 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
RTCB-205ENST00000487704 FBLN2P98095 1184 aa15.37■□□□□ 0.05
RTCB-205ENST00000487704 WIZO95785 1651 aa15.32■□□□□ 0.04
RTCB-205ENST00000487704 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.042e-8■■■■□ 19.7
RTCB-205ENST00000487704 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
RTCB-205ENST00000487704 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
RTCB-205ENST00000487704 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
RTCB-205ENST00000487704 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
RTCB-205ENST00000487704 KDM4FA0A1W2PPD8 638 aa15.19■□□□□ 0.02
RTCB-205ENST00000487704 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
RTCB-205ENST00000487704 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
RTCB-205ENST00000487704 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
RTCB-205ENST00000487704 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
RTCB-205ENST00000487704 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
RTCB-205ENST00000487704 TOP2AP11388 1531 aaKnown RBP15.11■□□□□ 0.01
RTCB-205ENST00000487704 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
RTCB-205ENST00000487704 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
RTCB-205ENST00000487704 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0.01
RTCB-205ENST00000487704 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
RTCB-205ENST00000487704 SYNJ2O15056 1496 aa15.03■□□□□ -0
RTCB-205ENST00000487704 SOGA1O94964 1423 aa15.03■□□□□ -0
RTCB-205ENST00000487704 WDR97A6NE52 1622 aa15.03■□□□□ -0
RTCB-205ENST00000487704 RAD54L2Q9Y4B4 1467 aa15.02■□□□□ -0
RTCB-205ENST00000487704 KIF13AQ9H1H9 1805 aa15.02■□□□□ -0
RTCB-205ENST00000487704 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
RTCB-205ENST00000487704 GRIN2BQ13224 1484 aa14.98□□□□□ -0.01
RTCB-205ENST00000487704 FBXO41Q8TF61 875 aa14.95□□□□□ -0.02
RTCB-205ENST00000487704 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
RTCB-205ENST00000487704 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
RTCB-205ENST00000487704 ABCC10Q5T3U5 1492 aa14.91□□□□□ -0.02
RTCB-205ENST00000487704 KDM6BO15054 1643 aa14.87□□□□□ -0.03
RTCB-205ENST00000487704 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
RTCB-205ENST00000487704 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
RTCB-205ENST00000487704 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
RTCB-205ENST00000487704 ADGRL1O94910 1474 aa14.8□□□□□ -0.04
RTCB-205ENST00000487704 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
RTCB-205ENST00000487704 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTCB-205ENST00000487704 NUP160Q12769 1436 aa14.79□□□□□ -0.04
RTCB-205ENST00000487704 SHROOM2Q13796 1616 aa14.78□□□□□ -0.04
RTCB-205ENST00000487704 DIP2BQ9P265 1576 aa14.78□□□□□ -0.04
RTCB-205ENST00000487704 GRIN2AQ12879 1464 aa14.77□□□□□ -0.04
RTCB-205ENST00000487704 PBRM1Q86U86 1689 aa14.76□□□□□ -0.05
RTCB-205ENST00000487704 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms