RNA–Protein interactions for RNA: ENST00000487703.5

CDK5-205, Transcript of cyclin dependent kinase 5, humanhuman

TSL 5

Gene CDK5, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-205ENST00000487703 NISCHQ9Y2I1 1504 aa31■■■□□ 2.55
CDK5-205ENST00000487703 ABCC9O60706 1549 aa27.88■■■□□ 2.05
CDK5-205ENST00000487703 CCDC180Q9P1Z9 1646 aa27.86■■■□□ 2.05
CDK5-205ENST00000487703 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
CDK5-205ENST00000487703 NACADO15069 1562 aa26.36■■□□□ 1.81
CDK5-205ENST00000487703 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
CDK5-205ENST00000487703 DCAF8L2P0C7V8 631 aa26.11■■□□□ 1.77
CDK5-205ENST00000487703 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
CDK5-205ENST00000487703 UNC13AQ9UPW8 1703 aa25.98■■□□□ 1.75
CDK5-205ENST00000487703 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
CDK5-205ENST00000487703 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
CDK5-205ENST00000487703 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
CDK5-205ENST00000487703 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
CDK5-205ENST00000487703 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
CDK5-205ENST00000487703 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
CDK5-205ENST00000487703 CC2D2AQ9P2K1 1620 aa25.22■■□□□ 1.63
CDK5-205ENST00000487703 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
CDK5-205ENST00000487703 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
CDK5-205ENST00000487703 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
CDK5-205ENST00000487703 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
CDK5-205ENST00000487703 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
CDK5-205ENST00000487703 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
CDK5-205ENST00000487703 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
CDK5-205ENST00000487703 HMGXB3Q12766 1538 aa24.14■■□□□ 1.45
CDK5-205ENST00000487703 CUX2O14529 1486 aa24.09■■□□□ 1.45
CDK5-205ENST00000487703 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
CDK5-205ENST00000487703 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
CDK5-205ENST00000487703 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
CDK5-205ENST00000487703 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
CDK5-205ENST00000487703 NESP48681 1621 aa23.94■■□□□ 1.42
CDK5-205ENST00000487703 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
CDK5-205ENST00000487703 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
CDK5-205ENST00000487703 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
CDK5-205ENST00000487703 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
CDK5-205ENST00000487703 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
CDK5-205ENST00000487703 WIZO95785 1651 aa23.59■■□□□ 1.37
CDK5-205ENST00000487703 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
CDK5-205ENST00000487703 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
CDK5-205ENST00000487703 WDR62O43379 1518 aa23.41■■□□□ 1.34
CDK5-205ENST00000487703 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
CDK5-205ENST00000487703 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
CDK5-205ENST00000487703 CFTRP13569 1480 aa23.3■■□□□ 1.32
CDK5-205ENST00000487703 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
CDK5-205ENST00000487703 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
CDK5-205ENST00000487703 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
CDK5-205ENST00000487703 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
CDK5-205ENST00000487703 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
CDK5-205ENST00000487703 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
CDK5-205ENST00000487703 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
CDK5-205ENST00000487703 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
CDK5-205ENST00000487703 TOPBP1Q92547 1522 aa22.86■■□□□ 1.25
CDK5-205ENST00000487703 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
CDK5-205ENST00000487703 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
CDK5-205ENST00000487703 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
CDK5-205ENST00000487703 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
CDK5-205ENST00000487703 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
CDK5-205ENST00000487703 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
CDK5-205ENST00000487703 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
CDK5-205ENST00000487703 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
CDK5-205ENST00000487703 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.21
CDK5-205ENST00000487703 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
CDK5-205ENST00000487703 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
CDK5-205ENST00000487703 CHD1O14646 1710 aa22.57■■□□□ 1.2
CDK5-205ENST00000487703 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
CDK5-205ENST00000487703 SOGA1O94964 1423 aa22.5■■□□□ 1.19
CDK5-205ENST00000487703 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
CDK5-205ENST00000487703 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
CDK5-205ENST00000487703 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
CDK5-205ENST00000487703 CUX1P39880 1505 aa22.43■■□□□ 1.18
CDK5-205ENST00000487703 FBLN2P98095 1184 aa22.42■■□□□ 1.18
CDK5-205ENST00000487703 CYB5RLQ6IPT4 315 aa22.42■■□□□ 1.18
CDK5-205ENST00000487703 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
CDK5-205ENST00000487703 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
CDK5-205ENST00000487703 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
CDK5-205ENST00000487703 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
CDK5-205ENST00000487703 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
CDK5-205ENST00000487703 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
CDK5-205ENST00000487703 SYNJ1O43426 1573 aa22.27■■□□□ 1.16
CDK5-205ENST00000487703 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
CDK5-205ENST00000487703 PBRM1Q86U86 1689 aa22.24■■□□□ 1.15
CDK5-205ENST00000487703 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
CDK5-205ENST00000487703 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
CDK5-205ENST00000487703 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
CDK5-205ENST00000487703 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
CDK5-205ENST00000487703 TRHP20396 242 aaPredicted RBP22.16■■□□□ 1.14
CDK5-205ENST00000487703 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
CDK5-205ENST00000487703 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
CDK5-205ENST00000487703 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
CDK5-205ENST00000487703 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
CDK5-205ENST00000487703 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
CDK5-205ENST00000487703 NUP160Q12769 1436 aa21.98■■□□□ 1.11
CDK5-205ENST00000487703 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
CDK5-205ENST00000487703 FHAD1B1AJZ9 1412 aa21.95■■□□□ 1.1
CDK5-205ENST00000487703 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.1
CDK5-205ENST00000487703 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
CDK5-205ENST00000487703 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
CDK5-205ENST00000487703 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
CDK5-205ENST00000487703 JPH4Q96JJ6 628 aa21.74■■□□□ 1.07
CDK5-205ENST00000487703 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
CDK5-205ENST00000487703 KIF13AQ9H1H9 1805 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms