RNA–Protein interactions for RNA: ENST00000487688.1

BRD9-206, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-206ENST00000487688 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
BRD9-206ENST00000487688 CCDC180Q9P1Z9 1646 aa27.86■■■□□ 2.05
BRD9-206ENST00000487688 ABCC9O60706 1549 aa27.74■■■□□ 2.03
BRD9-206ENST00000487688 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
BRD9-206ENST00000487688 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
BRD9-206ENST00000487688 NACADO15069 1562 aa26.4■■□□□ 1.82
BRD9-206ENST00000487688 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
BRD9-206ENST00000487688 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
BRD9-206ENST00000487688 ZCCHC6Q5VYS8 1495 aaKnown RBP25.95■■□□□ 1.74
BRD9-206ENST00000487688 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
BRD9-206ENST00000487688 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
BRD9-206ENST00000487688 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
BRD9-206ENST00000487688 BICRAQ9NZM4 1560 aa25.59■■□□□ 1.69
BRD9-206ENST00000487688 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
BRD9-206ENST00000487688 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
BRD9-206ENST00000487688 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
BRD9-206ENST00000487688 CC2D2AQ9P2K1 1620 aa25■■□□□ 1.59
BRD9-206ENST00000487688 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
BRD9-206ENST00000487688 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
BRD9-206ENST00000487688 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
BRD9-206ENST00000487688 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
BRD9-206ENST00000487688 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
BRD9-206ENST00000487688 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
BRD9-206ENST00000487688 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
BRD9-206ENST00000487688 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
BRD9-206ENST00000487688 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
BRD9-206ENST00000487688 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
BRD9-206ENST00000487688 ERCC6Q03468 1493 aa24.02■■□□□ 1.44
BRD9-206ENST00000487688 NESP48681 1621 aa23.84■■□□□ 1.41
BRD9-206ENST00000487688 CUX2O14529 1486 aa23.83■■□□□ 1.41
BRD9-206ENST00000487688 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
BRD9-206ENST00000487688 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
BRD9-206ENST00000487688 WIZO95785 1651 aa23.74■■□□□ 1.39
BRD9-206ENST00000487688 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
BRD9-206ENST00000487688 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
BRD9-206ENST00000487688 DNAJC5Q9H3Z4 198 aa23.6■■□□□ 1.37
BRD9-206ENST00000487688 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
BRD9-206ENST00000487688 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
BRD9-206ENST00000487688 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
BRD9-206ENST00000487688 CFTRP13569 1480 aa23.43■■□□□ 1.34
BRD9-206ENST00000487688 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
BRD9-206ENST00000487688 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
BRD9-206ENST00000487688 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
BRD9-206ENST00000487688 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
BRD9-206ENST00000487688 WDR62O43379 1518 aa23.29■■□□□ 1.32
BRD9-206ENST00000487688 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
BRD9-206ENST00000487688 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
BRD9-206ENST00000487688 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
BRD9-206ENST00000487688 PRDM2Q13029 1718 aa23■■□□□ 1.27
BRD9-206ENST00000487688 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
BRD9-206ENST00000487688 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
BRD9-206ENST00000487688 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
BRD9-206ENST00000487688 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
BRD9-206ENST00000487688 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
BRD9-206ENST00000487688 SOGA1O94964 1423 aa22.73■■□□□ 1.23
BRD9-206ENST00000487688 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
BRD9-206ENST00000487688 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
BRD9-206ENST00000487688 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.224e-8■■■■■ 41.9
BRD9-206ENST00000487688 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
BRD9-206ENST00000487688 FBLN2P98095 1184 aa22.64■■□□□ 1.21
BRD9-206ENST00000487688 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
BRD9-206ENST00000487688 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
BRD9-206ENST00000487688 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
BRD9-206ENST00000487688 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
BRD9-206ENST00000487688 CUX1P39880 1505 aa22.6■■□□□ 1.21
BRD9-206ENST00000487688 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
BRD9-206ENST00000487688 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
BRD9-206ENST00000487688 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
BRD9-206ENST00000487688 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
BRD9-206ENST00000487688 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
BRD9-206ENST00000487688 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
BRD9-206ENST00000487688 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
BRD9-206ENST00000487688 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
BRD9-206ENST00000487688 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
BRD9-206ENST00000487688 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
BRD9-206ENST00000487688 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
BRD9-206ENST00000487688 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
BRD9-206ENST00000487688 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
BRD9-206ENST00000487688 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
BRD9-206ENST00000487688 CHD1O14646 1710 aa22.34■■□□□ 1.17
BRD9-206ENST00000487688 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
BRD9-206ENST00000487688 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
BRD9-206ENST00000487688 BIVM-ERCC5R4GMW8 1640 aa22.25■■□□□ 1.15
BRD9-206ENST00000487688 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
BRD9-206ENST00000487688 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
BRD9-206ENST00000487688 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
BRD9-206ENST00000487688 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
BRD9-206ENST00000487688 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
BRD9-206ENST00000487688 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
BRD9-206ENST00000487688 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
BRD9-206ENST00000487688 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
BRD9-206ENST00000487688 ADAMTS12P58397 1594 aa22.07■■□□□ 1.12
BRD9-206ENST00000487688 NUP160Q12769 1436 aa22.05■■□□□ 1.12
BRD9-206ENST00000487688 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
BRD9-206ENST00000487688 IGF1RP08069 1367 aa21.97■■□□□ 1.11
BRD9-206ENST00000487688 JPH4Q96JJ6 628 aa21.96■■□□□ 1.11
BRD9-206ENST00000487688 CEP170Q5SW79 1584 aa21.95■■□□□ 1.11
BRD9-206ENST00000487688 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
BRD9-206ENST00000487688 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
BRD9-206ENST00000487688 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms