RNA–Protein interactions for RNA: ENST00000487584.6

SETDB1-211, Transcript of SET domain bifurcated 1, humanhuman

TSL 4

Gene SETDB1, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-211ENST00000487584 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
SETDB1-211ENST00000487584 ABCC9O60706 1549 aa29.59■■■□□ 2.33
SETDB1-211ENST00000487584 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
SETDB1-211ENST00000487584 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
SETDB1-211ENST00000487584 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
SETDB1-211ENST00000487584 NACADO15069 1562 aa27.69■■■□□ 2.02
SETDB1-211ENST00000487584 DCAF8L2P0C7V8 631 aa27.6■■■□□ 2.01
SETDB1-211ENST00000487584 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
SETDB1-211ENST00000487584 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
SETDB1-211ENST00000487584 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
SETDB1-211ENST00000487584 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
SETDB1-211ENST00000487584 SHROOM4Q9ULL8 1493 aa26.8■■□□□ 1.88
SETDB1-211ENST00000487584 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
SETDB1-211ENST00000487584 CC2D2AQ9P2K1 1620 aa26.67■■□□□ 1.86
SETDB1-211ENST00000487584 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
SETDB1-211ENST00000487584 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
SETDB1-211ENST00000487584 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
SETDB1-211ENST00000487584 SCRIBQ14160 1630 aa26.45■■□□□ 1.82
SETDB1-211ENST00000487584 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
SETDB1-211ENST00000487584 CUX2O14529 1486 aa25.74■■□□□ 1.71
SETDB1-211ENST00000487584 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
SETDB1-211ENST00000487584 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
SETDB1-211ENST00000487584 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
SETDB1-211ENST00000487584 SMARCA2P51531 1590 aa25.34■■□□□ 1.65
SETDB1-211ENST00000487584 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
SETDB1-211ENST00000487584 NESP48681 1621 aa25.25■■□□□ 1.63
SETDB1-211ENST00000487584 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
SETDB1-211ENST00000487584 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
SETDB1-211ENST00000487584 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
SETDB1-211ENST00000487584 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
SETDB1-211ENST00000487584 THOC2Q8NI27 1593 aaKnown RBP25.03■■□□□ 1.6
SETDB1-211ENST00000487584 PDS5BQ9NTI5 1447 aa25.02■■□□□ 1.6
SETDB1-211ENST00000487584 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
SETDB1-211ENST00000487584 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
SETDB1-211ENST00000487584 KIF21AQ7Z4S6 1674 aa24.84■■□□□ 1.57
SETDB1-211ENST00000487584 CADPSQ9ULU8 1353 aa24.83■■□□□ 1.57
SETDB1-211ENST00000487584 MROH2BQ7Z745 1585 aa24.81■■□□□ 1.56
SETDB1-211ENST00000487584 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
SETDB1-211ENST00000487584 WDR62O43379 1518 aa24.65■■□□□ 1.54
SETDB1-211ENST00000487584 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
SETDB1-211ENST00000487584 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
SETDB1-211ENST00000487584 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
SETDB1-211ENST00000487584 WIZO95785 1651 aa24.46■■□□□ 1.51
SETDB1-211ENST00000487584 CFTRP13569 1480 aa24.4■■□□□ 1.5
SETDB1-211ENST00000487584 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
SETDB1-211ENST00000487584 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
SETDB1-211ENST00000487584 TOP2AP11388 1531 aaKnown RBP24.16■■□□□ 1.46
SETDB1-211ENST00000487584 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
SETDB1-211ENST00000487584 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
SETDB1-211ENST00000487584 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
SETDB1-211ENST00000487584 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
SETDB1-211ENST00000487584 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
SETDB1-211ENST00000487584 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
SETDB1-211ENST00000487584 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
SETDB1-211ENST00000487584 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
SETDB1-211ENST00000487584 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
SETDB1-211ENST00000487584 TOPBP1Q92547 1522 aa23.95■■□□□ 1.43
SETDB1-211ENST00000487584 TRHP20396 242 aaPredicted RBP23.94■■□□□ 1.42
SETDB1-211ENST00000487584 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
SETDB1-211ENST00000487584 FBLN2P98095 1184 aa23.87■■□□□ 1.41
SETDB1-211ENST00000487584 EIF4G3O43432 1585 aaKnown RBP23.83■■□□□ 1.41
SETDB1-211ENST00000487584 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.41e-10■□□□□ 8.5
SETDB1-211ENST00000487584 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
SETDB1-211ENST00000487584 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
SETDB1-211ENST00000487584 CHD1O14646 1710 aa23.73■■□□□ 1.39
SETDB1-211ENST00000487584 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
SETDB1-211ENST00000487584 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
SETDB1-211ENST00000487584 SOGA1O94964 1423 aa23.65■■□□□ 1.38
SETDB1-211ENST00000487584 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
SETDB1-211ENST00000487584 CHMP7Q8WUX9 453 aaPredicted RBP23.64■■□□□ 1.37
SETDB1-211ENST00000487584 TDRD9Q8NDG6 1382 aaKnown RBP23.64■■□□□ 1.37
SETDB1-211ENST00000487584 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
SETDB1-211ENST00000487584 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
SETDB1-211ENST00000487584 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
SETDB1-211ENST00000487584 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
SETDB1-211ENST00000487584 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
SETDB1-211ENST00000487584 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
SETDB1-211ENST00000487584 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
SETDB1-211ENST00000487584 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
SETDB1-211ENST00000487584 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
SETDB1-211ENST00000487584 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
SETDB1-211ENST00000487584 CUX1P39880 1505 aa23.33■■□□□ 1.33
SETDB1-211ENST00000487584 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
SETDB1-211ENST00000487584 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
SETDB1-211ENST00000487584 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
SETDB1-211ENST00000487584 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
SETDB1-211ENST00000487584 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.28
SETDB1-211ENST00000487584 NUP160Q12769 1436 aa23.07■■□□□ 1.28
SETDB1-211ENST00000487584 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
SETDB1-211ENST00000487584 CEP170Q5SW79 1584 aa23.05■■□□□ 1.28
SETDB1-211ENST00000487584 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
SETDB1-211ENST00000487584 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
SETDB1-211ENST00000487584 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
SETDB1-211ENST00000487584 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
SETDB1-211ENST00000487584 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
SETDB1-211ENST00000487584 PRG4Q92954 1404 aaPredicted RBP22.93■■□□□ 1.26
SETDB1-211ENST00000487584 FAM69CQ0P6D2 419 aa22.92■■□□□ 1.26
SETDB1-211ENST00000487584 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
SETDB1-211ENST00000487584 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
SETDB1-211ENST00000487584 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms